EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000001311 (Gene tree)
Gene ID
112144929
Gene Symbol
apobec2a
Alias
-
Full Name
C->U-editing enzyme APOBEC-2-like
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Plus strand
Length
5686 bases
Position
chrNVQA01000009.1:23264501-23270186
Accession
112144929
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000000453APOBEC_NPF08210.113.2e-4611
ENSOMEP00000000453APOBEC_CPF05240.145e-2411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000015888-2119-ENSOMEP00000000453239 (aa)XP_024125589UPI000CF83CDE
Gene Model
Click here to download ENSOMEG00000001311's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000001311's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000001311apobec2a9956.904ENSOMEG00000015449APOBEC29955.466
ENSOMEG00000001311apobec2a7033.333ENSOMEG00000011880aicda8532.418
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000001311apobec2a8354.412ENSG00000124701APOBEC29951.802Homo_sapiens
ENSOMEG00000001311apobec2a9753.017ENSAPOG00000019390apobec2b8652.564Acanthochromis_polyacanthus
ENSOMEG00000001311apobec2a8451.220ENSAMEG00000004467APOBEC29346.610Ailuropoda_melanoleuca
ENSOMEG00000001311apobec2a7873.656ENSACIG00000016370apobec2a8961.864Amphilophus_citrinellus
ENSOMEG00000001311apobec2a9654.545ENSACIG00000002472APOBEC29954.545Amphilophus_citrinellus
ENSOMEG00000001311apobec2a9753.448ENSAOCG00000023355apobec2b8652.991Amphiprion_ocellaris
ENSOMEG00000001311apobec2a9969.919ENSAOCG00000003291apobec2a9969.919Amphiprion_ocellaris
ENSOMEG00000001311apobec2a9969.512ENSAPEG00000003630apobec2a9969.512Amphiprion_percula
ENSOMEG00000001311apobec2a9754.701ENSAPEG00000004591apobec2b8254.701Amphiprion_percula
ENSOMEG00000001311apobec2a10067.063ENSATEG00000000956apobec2a9878.286Anabas_testudineus
ENSOMEG00000001311apobec2a9554.867ENSATEG00000023043APOBEC28654.237Anabas_testudineus
ENSOMEG00000001311apobec2a7755.319ENSAPLG00000002895APOBEC28355.319Anas_platyrhynchos
ENSOMEG00000001311apobec2a7953.125ENSACAG00000016506APOBEC29555.307Anolis_carolinensis
ENSOMEG00000001311apobec2a8354.412ENSANAG00000026993APOBEC29951.802Aotus_nancymaae
ENSOMEG00000001311apobec2a8857.547ENSACLG00000007634APOBEC28653.419Astatotilapia_calliptera
ENSOMEG00000001311apobec2a7372.414ENSACLG00000026736-9772.414Astatotilapia_calliptera
ENSOMEG00000001311apobec2a8864.352ENSAMXG00000042992apobec2a9362.500Astyanax_mexicanus
ENSOMEG00000001311apobec2a9161.364ENSAMXG00000015966apobec2b7761.364Astyanax_mexicanus
ENSOMEG00000001311apobec2a8353.202ENSBTAG00000005974APOBEC27150.450Bos_taurus
ENSOMEG00000001311apobec2a8354.902ENSCJAG00000004063APOBEC29952.252Callithrix_jacchus
ENSOMEG00000001311apobec2a8353.431ENSCAFG00000001575APOBEC29852.055Canis_familiaris
ENSOMEG00000001311apobec2a8353.922ENSCAFG00020008306APOBEC29852.511Canis_lupus_dingo
ENSOMEG00000001311apobec2a8253.465ENSCHIG00000026348APOBEC29852.055Capra_hircus
ENSOMEG00000001311apobec2a7954.922ENSTSYG00000008206APOBEC29948.927Carlito_syrichta
ENSOMEG00000001311apobec2a7953.368ENSCAPG00000015084APOBEC29749.774Cavia_aperea
ENSOMEG00000001311apobec2a7953.368ENSCPOG00000036103APOBEC29749.774Cavia_porcellus
ENSOMEG00000001311apobec2a8354.412ENSCCAG00000033987APOBEC29853.636Cebus_capucinus
ENSOMEG00000001311apobec2a8354.412ENSCATG00000010691APOBEC29950.870Cercocebus_atys
ENSOMEG00000001311apobec2a7953.886ENSCLAG00000013817APOBEC29651.376Chinchilla_lanigera
ENSOMEG00000001311apobec2a8354.412ENSCSAG00000011177APOBEC29951.802Chlorocebus_sabaeus
ENSOMEG00000001311apobec2a7355.866ENSCHOG00000008930APOBEC29955.866Choloepus_hoffmanni
ENSOMEG00000001311apobec2a8952.273ENSCPBG00000017469APOBEC29953.211Chrysemys_picta_bellii
ENSOMEG00000001311apobec2a8354.902ENSCANG00000035072APOBEC29952.252Colobus_angolensis_palliatus
ENSOMEG00000001311apobec2a8753.670ENSCGRG00001014983Apobec29753.670Cricetulus_griseus_chok1gshd
ENSOMEG00000001311apobec2a8753.670ENSCGRG00000007835Apobec29753.670Cricetulus_griseus_crigri
ENSOMEG00000001311apobec2a9751.293ENSCSEG00000000690-8850.847Cynoglossus_semilaevis
ENSOMEG00000001311apobec2a10066.135ENSCSEG00000020201apobec2a10066.135Cynoglossus_semilaevis
ENSOMEG00000001311apobec2a9657.826ENSCVAG00000012342apobec2b8457.826Cyprinodon_variegatus
ENSOMEG00000001311apobec2a10061.024ENSDARG00000018881apobec2a9461.569Danio_rerio
ENSOMEG00000001311apobec2a9658.369ENSDARG00000113992apobec2b8558.333Danio_rerio
ENSOMEG00000001311apobec2a7835.533ENSDNOG00000033914APOBEC29834.821Dasypus_novemcinctus
ENSOMEG00000001311apobec2a7856.250ENSDORG00000006447Apobec29852.232Dipodomys_ordii
ENSOMEG00000001311apobec2a7955.440ENSETEG00000000624APOBEC29851.111Echinops_telfairi
ENSOMEG00000001311apobec2a6757.143ENSEASG00005002937APOBEC28457.143Equus_asinus_asinus
ENSOMEG00000001311apobec2a7954.922ENSECAG00000006576APOBEC28655.208Equus_caballus
ENSOMEG00000001311apobec2a7854.167ENSEEUG00000006046APOBEC29851.142Erinaceus_europaeus
ENSOMEG00000001311apobec2a9563.478ENSELUG00000003736apobec2a8164.655Esox_lucius
ENSOMEG00000001311apobec2a7955.959ENSFCAG00000004108APOBEC29852.968Felis_catus
ENSOMEG00000001311apobec2a7744.974ENSFALG00000003910APOBEC29942.273Ficedula_albicollis
ENSOMEG00000001311apobec2a8352.941ENSFDAG00000006015APOBEC29851.818Fukomys_damarensis
ENSOMEG00000001311apobec2a9955.462ENSFHEG00000005492apobec2b9956.904Fundulus_heteroclitus
ENSOMEG00000001311apobec2a7375.429ENSGMOG00000007028apobec2a10075.429Gadus_morhua
ENSOMEG00000001311apobec2a8556.650ENSGMOG00000006819apobec2b9951.639Gadus_morhua
ENSOMEG00000001311apobec2a7755.556ENSGALG00000003226APOBEC28555.556Gallus_gallus
ENSOMEG00000001311apobec2a9757.576ENSGAFG00000007634apobec2b7457.576Gambusia_affinis
ENSOMEG00000001311apobec2a7978.191ENSGACG00000011671apobec2a10078.191Gasterosteus_aculeatus
ENSOMEG00000001311apobec2a8259.694ENSGACG00000009663apobec2b9954.468Gasterosteus_aculeatus
ENSOMEG00000001311apobec2a8952.036ENSGAGG00000010347APOBEC29952.968Gopherus_agassizii
ENSOMEG00000001311apobec2a8354.412ENSGGOG00000001099APOBEC29951.316Gorilla_gorilla
ENSOMEG00000001311apobec2a9965.462ENSHBUG00000015890apobec2a9965.462Haplochromis_burtoni
ENSOMEG00000001311apobec2a9255.405ENSHBUG00000005993apobec2b8653.846Haplochromis_burtoni
ENSOMEG00000001311apobec2a8353.695ENSHGLG00000017169APOBEC29652.294Heterocephalus_glaber_female
ENSOMEG00000001311apobec2a8353.695ENSHGLG00100019442APOBEC29652.294Heterocephalus_glaber_male
ENSOMEG00000001311apobec2a8857.346ENSHCOG00000002712APOBEC27857.346Hippocampus_comes
ENSOMEG00000001311apobec2a9662.551ENSHCOG00000020319apobec2a9962.551Hippocampus_comes
ENSOMEG00000001311apobec2a9160.731ENSIPUG00000013784Apobec28060.731Ictalurus_punctatus
ENSOMEG00000001311apobec2a8862.617ENSIPUG00000017355apobec2a6759.414Ictalurus_punctatus
ENSOMEG00000001311apobec2a9151.570ENSSTOG00000023643APOBEC29853.425Ictidomys_tridecemlineatus
ENSOMEG00000001311apobec2a8354.680ENSJJAG00000009733Apobec29951.802Jaculus_jaculus
ENSOMEG00000001311apobec2a9753.247ENSKMAG00000020631apobec2b8953.556Kryptolebias_marmoratus
ENSOMEG00000001311apobec2a9455.752ENSLBEG00000009422-7955.752Labrus_bergylta
ENSOMEG00000001311apobec2a10069.636ENSLBEG00000025214apobec2a10069.636Labrus_bergylta
ENSOMEG00000001311apobec2a9053.953ENSLACG00000015985APOBEC29353.953Latimeria_chalumnae
ENSOMEG00000001311apobec2a8262.944ENSLOCG00000012415apobec2b8557.143Lepisosteus_oculatus
ENSOMEG00000001311apobec2a8355.172ENSLAFG00000016563APOBEC29853.881Loxodonta_africana
ENSOMEG00000001311apobec2a8354.412ENSMFAG00000044645APOBEC29951.802Macaca_fascicularis
ENSOMEG00000001311apobec2a8354.412ENSMMUG00000021171APOBEC29951.802Macaca_mulatta
ENSOMEG00000001311apobec2a8354.412ENSMNEG00000045497APOBEC29951.802Macaca_nemestrina
ENSOMEG00000001311apobec2a8354.412ENSMLEG00000028328APOBEC29951.802Mandrillus_leucophaeus
ENSOMEG00000001311apobec2a9755.556ENSMAMG00000007926APOBEC28355.556Mastacembelus_armatus
ENSOMEG00000001311apobec2a10065.339ENSMAMG00000023685apobec2a9765.339Mastacembelus_armatus
ENSOMEG00000001311apobec2a9369.507ENSMZEG00005005240-8876.471Maylandia_zebra
ENSOMEG00000001311apobec2a9954.393ENSMZEG00005027159APOBEC28654.393Maylandia_zebra
ENSOMEG00000001311apobec2a7755.556ENSMGAG00000010173APOBEC29454.749Meleagris_gallopavo
ENSOMEG00000001311apobec2a9152.252ENSMAUG00000011016Apobec29952.252Mesocricetus_auratus
ENSOMEG00000001311apobec2a9150.901ENSMICG00000043339APOBEC29950.901Microcebus_murinus
ENSOMEG00000001311apobec2a8355.172ENSMOCG00000001904Apobec29155.172Microtus_ochrogaster
ENSOMEG00000001311apobec2a9755.983ENSMMOG00000008681apobec2b8655.983Mola_mola
ENSOMEG00000001311apobec2a8552.558ENSMODG00000013090APOBEC29752.558Monodelphis_domestica
ENSOMEG00000001311apobec2a10065.863ENSMALG00000020523apobec2a10066.265Monopterus_albus
ENSOMEG00000001311apobec2a9949.219ENSMALG00000013779APOBEC29949.219Monopterus_albus
ENSOMEG00000001311apobec2a8355.665MGP_CAROLIEiJ_G0021727Apobec29155.665Mus_caroli
ENSOMEG00000001311apobec2a8355.665ENSMUSG00000040694Apobec29155.665Mus_musculus
ENSOMEG00000001311apobec2a8355.665MGP_PahariEiJ_G0020716Apobec29155.665Mus_pahari
ENSOMEG00000001311apobec2a8353.695ENSMPUG00000013691APOBEC29950.216Mustela_putorius_furo
ENSOMEG00000001311apobec2a8352.451ENSMLUG00000011327APOBEC29948.908Myotis_lucifugus
ENSOMEG00000001311apobec2a8355.172ENSNGAG00000013717Apobec29952.252Nannospalax_galili
ENSOMEG00000001311apobec2a7977.368ENSNBRG00000021776apobec2a9965.462Neolamprologus_brichardi
ENSOMEG00000001311apobec2a9356.250ENSNBRG00000018806apobec2b7755.000Neolamprologus_brichardi
ENSOMEG00000001311apobec2a8354.412ENSNLEG00000005057APOBEC29951.802Nomascus_leucogenys
ENSOMEG00000001311apobec2a8553.023ENSMEUG00000011623APOBEC29753.023Notamacropus_eugenii
ENSOMEG00000001311apobec2a7955.440ENSOPRG00000014808APOBEC29751.802Ochotona_princeps
ENSOMEG00000001311apobec2a7954.922ENSODEG00000016183APOBEC29652.055Octodon_degus
ENSOMEG00000001311apobec2a9356.250ENSONIG00000012289apobec2b8755.000Oreochromis_niloticus
ENSOMEG00000001311apobec2a9967.470ENSONIG00000004644-9967.470Oreochromis_niloticus
ENSOMEG00000001311apobec2a6954.167ENSOANG00000000824APOBEC29852.778Ornithorhynchus_anatinus
ENSOMEG00000001311apobec2a7955.959ENSOCUG00000028008APOBEC29752.273Oryctolagus_cuniculus
ENSOMEG00000001311apobec2a9756.897ENSORLG00000022372APOBEC28556.897Oryzias_latipes
ENSOMEG00000001311apobec2a10092.469ENSORLG00000010752apobec2a10092.469Oryzias_latipes
ENSOMEG00000001311apobec2a10092.887ENSORLG00020004153apobec2a10092.887Oryzias_latipes_hni
ENSOMEG00000001311apobec2a9757.328ENSORLG00020006164APOBEC28557.328Oryzias_latipes_hni
ENSOMEG00000001311apobec2a10092.469ENSORLG00015021781apobec2a10092.469Oryzias_latipes_hsok
ENSOMEG00000001311apobec2a9856.780ENSORLG00015022089-8557.328Oryzias_latipes_hsok
ENSOMEG00000001311apobec2a9151.351ENSOGAG00000002632APOBEC29951.351Otolemur_garnettii
ENSOMEG00000001311apobec2a8253.465ENSOARG00000000820APOBEC29950.450Ovis_aries
ENSOMEG00000001311apobec2a8354.412ENSPPAG00000035598APOBEC29951.316Pan_paniscus
ENSOMEG00000001311apobec2a7955.959ENSPPRG00000008530APOBEC29852.968Panthera_pardus
ENSOMEG00000001311apobec2a8353.922ENSPTIG00000011084APOBEC29154.187Panthera_tigris_altaica
ENSOMEG00000001311apobec2a8354.412ENSPTRG00000029679APOBEC29951.316Pan_troglodytes
ENSOMEG00000001311apobec2a8354.412ENSPANG00000007121APOBEC29951.802Papio_anubis
ENSOMEG00000001311apobec2a9957.371ENSPKIG00000005395apobec2a9957.371Paramormyrops_kingsleyae
ENSOMEG00000001311apobec2a9857.447ENSPKIG00000004741apobec2b7661.611Paramormyrops_kingsleyae
ENSOMEG00000001311apobec2a7755.914ENSPSIG00000013480APOBEC29950.427Pelodiscus_sinensis
ENSOMEG00000001311apobec2a10068.000ENSPMGG00000004044apobec2a9968.400Periophthalmus_magnuspinnatus
ENSOMEG00000001311apobec2a9947.955ENSPMGG00000002686APOBEC28047.955Periophthalmus_magnuspinnatus
ENSOMEG00000001311apobec2a8355.172ENSPEMG00000005724Apobec29951.304Peromyscus_maniculatus_bairdii
ENSOMEG00000001311apobec2a9854.894ENSPFOG00000001216apobec2b9253.629Poecilia_formosa
ENSOMEG00000001311apobec2a9954.656ENSPLAG00000002074apobec2b9955.466Poecilia_latipinna
ENSOMEG00000001311apobec2a9657.826ENSPMEG00000017537apobec2b9253.629Poecilia_mexicana
ENSOMEG00000001311apobec2a9757.759ENSPREG00000020060apobec2b7457.759Poecilia_reticulata
ENSOMEG00000001311apobec2a8353.922ENSPPYG00000016586APOBEC29951.351Pongo_abelii
ENSOMEG00000001311apobec2a7755.263ENSPCAG00000011433APOBEC29955.263Procavia_capensis
ENSOMEG00000001311apobec2a9151.802ENSPCOG00000026935APOBEC29951.802Propithecus_coquereli
ENSOMEG00000001311apobec2a7854.404ENSPVAG00000008316APOBEC28654.404Pteropus_vampyrus
ENSOMEG00000001311apobec2a8857.547ENSPNYG00000016747apobec2b8653.419Pundamilia_nyererei
ENSOMEG00000001311apobec2a9061.009ENSPNAG00000013666apobec2b8657.025Pygocentrus_nattereri
ENSOMEG00000001311apobec2a9958.025ENSPNAG00000010382apobec2a9258.025Pygocentrus_nattereri
ENSOMEG00000001311apobec2a8355.172ENSRNOG00000012303Apobec29155.172Rattus_norvegicus
ENSOMEG00000001311apobec2a8354.412ENSRBIG00000044756APOBEC29951.802Rhinopithecus_bieti
ENSOMEG00000001311apobec2a8354.902ENSRROG00000030082APOBEC29952.252Rhinopithecus_roxellana
ENSOMEG00000001311apobec2a8354.412ENSSBOG00000028496APOBEC29951.802Saimiri_boliviensis_boliviensis
ENSOMEG00000001311apobec2a7954.922ENSSHAG00000017771APOBEC29851.835Sarcophilus_harrisii
ENSOMEG00000001311apobec2a8861.611ENSSFOG00015022920apobec29055.600Scleropages_formosus
ENSOMEG00000001311apobec2a7354.802ENSSFOG00015005437-7454.802Scleropages_formosus
ENSOMEG00000001311apobec2a7960.847ENSSMAG00000005110APOBEC27957.991Scophthalmus_maximus
ENSOMEG00000001311apobec2a10067.742ENSSMAG00000001011apobec2a7467.742Scophthalmus_maximus
ENSOMEG00000001311apobec2a10066.270ENSSDUG00000007013apobec2a10066.270Seriola_dumerili
ENSOMEG00000001311apobec2a8858.962ENSSDUG00000014543apobec2b8654.701Seriola_dumerili
ENSOMEG00000001311apobec2a8858.962ENSSLDG00000003321apobec2b8654.701Seriola_lalandi_dorsalis
ENSOMEG00000001311apobec2a10065.079ENSSLDG00000020199apobec2a10065.079Seriola_lalandi_dorsalis
ENSOMEG00000001311apobec2a7351.381ENSSPUG00000010839APOBEC28751.381Sphenodon_punctatus
ENSOMEG00000001311apobec2a9656.710ENSSPAG00000005253apobec2b9154.032Stegastes_partitus
ENSOMEG00000001311apobec2a10068.421ENSSPAG00000016299-10068.421Stegastes_partitus
ENSOMEG00000001311apobec2a8352.451ENSSSCG00000036018APOBEC29851.598Sus_scrofa
ENSOMEG00000001311apobec2a7752.128ENSTGUG00000018533APOBEC210048.198Taeniopygia_guttata
ENSOMEG00000001311apobec2a10064.777ENSTRUG00000009123apobec2a10064.777Takifugu_rubripes
ENSOMEG00000001311apobec2a9949.430ENSTRUG00000012839apobec2b9949.430Takifugu_rubripes
ENSOMEG00000001311apobec2a9949.430ENSTNIG00000015038apobec2b9949.430Tetraodon_nigroviridis
ENSOMEG00000001311apobec2a8353.431ENSTBEG00000003553APOBEC29950.901Tupaia_belangeri
ENSOMEG00000001311apobec2a9148.198ENSTTRG00000013392APOBEC29948.198Tursiops_truncatus
ENSOMEG00000001311apobec2a8353.202ENSUAMG00000027667APOBEC29351.887Ursus_americanus
ENSOMEG00000001311apobec2a8353.922ENSVVUG00000026617APOBEC29950.435Vulpes_vulpes
ENSOMEG00000001311apobec2a8744.344ENSXETG00000008007apobec29444.344Xenopus_tropicalis
ENSOMEG00000001311apobec2a9656.087ENSXCOG00000007398apobec2b9054.661Xiphophorus_couchianus
ENSOMEG00000001311apobec2a9656.522ENSXMAG00000008134apobec2b8456.522Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us