EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000001868 (Gene tree)
Gene ID: 112151281
Gene Symbol: si:dkey-37o8.1
Alias: -
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 4084 bases
Position: chrNVQA01000015.1:17889403-17893486
Accession: 112151281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000000984	GTP_EFTU	PF00009.27	1.3e-53	1	1
ENSOMEP00000000984	MMR_HSR1	PF01926.23	9.2e-06	1	1
ENSOMEP00000000984	GTP_EFTU_D2	PF03144.25	1.4e-12	1	1
ENSOMEP00000000984	GTP_EFTU_D3	PF03143.17	3.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000014950	-	2732	-	ENSOMEP00000000984	456 (aa)	XP_024135877	UPI000CF83FB8

Gene Model

Click here to download ENSOMEG00000001868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000001868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000001868	si:dkey-37o8.1	96	30.872	ENSOMEG00000016958	tufm	87	30.872
ENSOMEG00000001868	si:dkey-37o8.1	96	38.688	ENSOMEG00000016715	hbs1l	61	38.688
ENSOMEG00000001868	si:dkey-37o8.1	98	70.246	ENSOMEG00000018226	-	98	70.199
ENSOMEG00000001868	si:dkey-37o8.1	97	72.460	ENSOMEG00000023456	eef1a1b	96	72.460
ENSOMEG00000001868	si:dkey-37o8.1	96	38.776	ENSOMEG00000008108	-	83	37.668
ENSOMEG00000001868	si:dkey-37o8.1	97	72.009	ENSOMEG00000018209	-	96	72.009
ENSOMEG00000001868	si:dkey-37o8.1	87	71.139	ENSOMEG00000006888	-	95	71.139
ENSOMEG00000001868	si:dkey-37o8.1	97	38.341	ENSOMEG00000002739	gspt1l	77	38.341

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000001868	si:dkey-37o8.1	98	91.518	ENSAPOG00000016459	si:dkey-37o8.1	98	91.518	Acanthochromis_polyacanthus
ENSOMEG00000001868	si:dkey-37o8.1	96	89.245	ENSACIG00000020985	si:dkey-37o8.1	82	89.245	Amphilophus_citrinellus
ENSOMEG00000001868	si:dkey-37o8.1	100	91.466	ENSAOCG00000002663	si:dkey-37o8.1	100	91.466	Amphiprion_ocellaris
ENSOMEG00000001868	si:dkey-37o8.1	100	91.466	ENSAPEG00000012670	si:dkey-37o8.1	100	91.466	Amphiprion_percula
ENSOMEG00000001868	si:dkey-37o8.1	93	91.943	ENSATEG00000002217	si:dkey-37o8.1	99	91.943	Anabas_testudineus
ENSOMEG00000001868	si:dkey-37o8.1	100	90.132	ENSACLG00000003519	si:dkey-37o8.1	100	90.132	Astatotilapia_calliptera
ENSOMEG00000001868	si:dkey-37o8.1	100	85.590	ENSAMXG00000002728	si:dkey-37o8.1	100	85.590	Astyanax_mexicanus
ENSOMEG00000001868	si:dkey-37o8.1	98	73.826	ENSCPBG00000020570	-	88	73.826	Chrysemys_picta_bellii
ENSOMEG00000001868	si:dkey-37o8.1	100	84.096	ENSCSEG00000019807	si:dkey-37o8.1	100	83.405	Cynoglossus_semilaevis
ENSOMEG00000001868	si:dkey-37o8.1	99	90.728	ENSCVAG00000009828	si:dkey-37o8.1	99	90.728	Cyprinodon_variegatus
ENSOMEG00000001868	si:dkey-37o8.1	100	82.751	ENSDARG00000071727	si:dkey-37o8.1	95	82.751	Danio_rerio
ENSOMEG00000001868	si:dkey-37o8.1	100	84.061	ENSELUG00000007495	si:dkey-37o8.1	100	84.061	Esox_lucius
ENSOMEG00000001868	si:dkey-37o8.1	100	89.278	ENSFHEG00000017452	si:dkey-37o8.1	100	89.278	Fundulus_heteroclitus
ENSOMEG00000001868	si:dkey-37o8.1	99	81.898	ENSGMOG00000006122	si:dkey-37o8.1	99	81.898	Gadus_morhua
ENSOMEG00000001868	si:dkey-37o8.1	98	84.187	ENSGAFG00000000367	si:dkey-37o8.1	99	84.187	Gambusia_affinis
ENSOMEG00000001868	si:dkey-37o8.1	100	87.527	ENSGACG00000004505	si:dkey-37o8.1	100	87.527	Gasterosteus_aculeatus
ENSOMEG00000001868	si:dkey-37o8.1	98	74.497	ENSGAGG00000007724	-	95	79.808	Gopherus_agassizii
ENSOMEG00000001868	si:dkey-37o8.1	100	89.912	ENSHBUG00000015515	si:dkey-37o8.1	100	89.912	Haplochromis_burtoni
ENSOMEG00000001868	si:dkey-37o8.1	99	80.931	ENSHCOG00000001215	si:dkey-37o8.1	100	80.931	Hippocampus_comes
ENSOMEG00000001868	si:dkey-37o8.1	99	84.581	ENSIPUG00000004067	si:dkey-37o8.1	99	84.581	Ictalurus_punctatus
ENSOMEG00000001868	si:dkey-37o8.1	100	89.716	ENSKMAG00000015910	si:dkey-37o8.1	100	89.716	Kryptolebias_marmoratus
ENSOMEG00000001868	si:dkey-37o8.1	100	90.789	ENSLBEG00000021334	si:dkey-37o8.1	90	90.789	Labrus_bergylta
ENSOMEG00000001868	si:dkey-37o8.1	99	76.549	ENSLACG00000003948	si:dkey-37o8.1	97	76.549	Latimeria_chalumnae
ENSOMEG00000001868	si:dkey-37o8.1	98	81.655	ENSLOCG00000011245	si:dkey-37o8.1	97	81.655	Lepisosteus_oculatus
ENSOMEG00000001868	si:dkey-37o8.1	99	74.501	ENSMAMG00000009907	si:dkey-37o8.1	94	74.501	Mastacembelus_armatus
ENSOMEG00000001868	si:dkey-37o8.1	100	90.132	ENSMZEG00005018358	si:dkey-37o8.1	100	90.132	Maylandia_zebra
ENSOMEG00000001868	si:dkey-37o8.1	99	89.556	ENSMMOG00000004111	si:dkey-37o8.1	98	89.556	Mola_mola
ENSOMEG00000001868	si:dkey-37o8.1	96	80.365	ENSMALG00000017152	si:dkey-37o8.1	99	80.365	Monopterus_albus
ENSOMEG00000001868	si:dkey-37o8.1	100	89.693	ENSNBRG00000013552	si:dkey-37o8.1	100	89.693	Neolamprologus_brichardi
ENSOMEG00000001868	si:dkey-37o8.1	100	89.474	ENSONIG00000006165	si:dkey-37o8.1	100	89.474	Oreochromis_niloticus
ENSOMEG00000001868	si:dkey-37o8.1	100	96.711	ENSORLG00000019066	si:dkey-37o8.1	100	96.711	Oryzias_latipes
ENSOMEG00000001868	si:dkey-37o8.1	100	96.711	ENSORLG00020008094	si:dkey-37o8.1	100	96.711	Oryzias_latipes_hni
ENSOMEG00000001868	si:dkey-37o8.1	100	96.491	ENSORLG00015008410	si:dkey-37o8.1	100	96.491	Oryzias_latipes_hsok
ENSOMEG00000001868	si:dkey-37o8.1	100	83.151	ENSPKIG00000017246	si:dkey-37o8.1	99	83.151	Paramormyrops_kingsleyae
ENSOMEG00000001868	si:dkey-37o8.1	58	68.266	ENSPSIG00000008080	-	95	68.266	Pelodiscus_sinensis
ENSOMEG00000001868	si:dkey-37o8.1	100	91.028	ENSPFOG00000013173	si:dkey-37o8.1	100	91.028	Poecilia_formosa
ENSOMEG00000001868	si:dkey-37o8.1	100	89.497	ENSPLAG00000010405	si:dkey-37o8.1	100	89.497	Poecilia_latipinna
ENSOMEG00000001868	si:dkey-37o8.1	100	90.810	ENSPMEG00000015233	si:dkey-37o8.1	100	90.810	Poecilia_mexicana
ENSOMEG00000001868	si:dkey-37o8.1	99	90.529	ENSPREG00000006280	si:dkey-37o8.1	100	90.529	Poecilia_reticulata
ENSOMEG00000001868	si:dkey-37o8.1	100	89.912	ENSPNYG00000002059	si:dkey-37o8.1	100	89.912	Pundamilia_nyererei
ENSOMEG00000001868	si:dkey-37o8.1	100	84.716	ENSPNAG00000009990	si:dkey-37o8.1	100	84.716	Pygocentrus_nattereri
ENSOMEG00000001868	si:dkey-37o8.1	98	82.812	ENSSFOG00015019070	si:dkey-37o8.1	98	82.812	Scleropages_formosus
ENSOMEG00000001868	si:dkey-37o8.1	100	91.009	ENSSMAG00000016143	si:dkey-37o8.1	100	91.009	Scophthalmus_maximus
ENSOMEG00000001868	si:dkey-37o8.1	98	92.411	ENSSDUG00000009163	si:dkey-37o8.1	98	92.411	Seriola_dumerili
ENSOMEG00000001868	si:dkey-37o8.1	98	92.188	ENSSLDG00000023761	si:dkey-37o8.1	98	92.188	Seriola_lalandi_dorsalis
ENSOMEG00000001868	si:dkey-37o8.1	99	72.000	ENSSPUG00000007467	-	99	71.302	Sphenodon_punctatus
ENSOMEG00000001868	si:dkey-37o8.1	100	92.123	ENSSPAG00000013856	si:dkey-37o8.1	100	92.123	Stegastes_partitus
ENSOMEG00000001868	si:dkey-37o8.1	98	90.112	ENSTRUG00000009006	si:dkey-37o8.1	99	90.112	Takifugu_rubripes
ENSOMEG00000001868	si:dkey-37o8.1	98	90.625	ENSTNIG00000017138	si:dkey-37o8.1	97	90.625	Tetraodon_nigroviridis
ENSOMEG00000001868	si:dkey-37o8.1	96	76.310	ENSXETG00000017744	42Sp50	97	75.000	Xenopus_tropicalis
ENSOMEG00000001868	si:dkey-37o8.1	99	90.749	ENSXCOG00000012296	si:dkey-37o8.1	100	90.749	Xiphophorus_couchianus
ENSOMEG00000001868	si:dkey-37o8.1	100	90.810	ENSXMAG00000001998	si:dkey-37o8.1	100	90.810	Xiphophorus_maculatus