EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000002000 (Gene tree)
Gene ID: 112157945
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A0-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 1984 bases
Position: chrNVQA01000023.1:4876028-4878011
Accession: 112157945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000022472	RRM_1	PF00076.22	1.5e-46	1	3
ENSOMEP00000022472	RRM_1	PF00076.22	1.5e-46	2	3
ENSOMEP00000022472	RRM_1	PF00076.22	1.5e-46	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000014722	-	1984	-	ENSOMEP00000022472	475 (aa)	XP_024146827	UPI000CF83BFB

Gene Model

Click here to download ENSOMEG00000002000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000002000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000002000	-	60	52.000	ENSOMEG00000015959	-	57	52.000
ENSOMEG00000002000	-	99	82.500	ENSOMEG00000006327	-	97	82.500
ENSOMEG00000002000	-	53	32.530	ENSOMEG00000023959	elavl3	86	30.667
ENSOMEG00000002000	-	99	73.517	ENSOMEG00000002509	-	99	73.517
ENSOMEG00000002000	-	75	36.364	ENSOMEG00000000146	msi2a	59	41.304
ENSOMEG00000002000	-	53	42.667	ENSOMEG00000018558	hnrnpd	81	42.667
ENSOMEG00000002000	-	65	40.909	ENSOMEG00000003120	dazap1	54	40.909
ENSOMEG00000002000	-	99	71.822	ENSOMEG00000021030	-	99	71.822
ENSOMEG00000002000	-	99	73.517	ENSOMEG00000012368	-	99	73.305
ENSOMEG00000002000	-	60	81.325	ENSOMEG00000009566	-	87	81.325
ENSOMEG00000002000	-	81	80.342	ENSOMEG00000002084	-	71	79.630
ENSOMEG00000002000	-	100	71.789	ENSOMEG00000006903	-	97	71.579
ENSOMEG00000002000	-	59	49.425	ENSOMEG00000004838	hnrnpa3	56	49.425
ENSOMEG00000002000	-	52	43.038	ENSOMEG00000021469	cirbpa	80	42.683
ENSOMEG00000002000	-	55	42.683	ENSOMEG00000005936	hnrnpaba	50	42.683
ENSOMEG00000002000	-	69	65.000	ENSOMEG00000002091	-	91	64.000
ENSOMEG00000002000	-	99	74.576	ENSOMEG00000023475	-	99	74.364
ENSOMEG00000002000	-	59	44.737	ENSOMEG00000023772	hnrnpabb	54	44.156
ENSOMEG00000002000	-	65	36.283	ENSOMEG00000017536	MSI1	52	43.750
ENSOMEG00000002000	-	69	67.857	ENSOMEG00000011670	-	96	67.857
ENSOMEG00000002000	-	91	74.419	ENSOMEG00000013637	-	99	74.419
ENSOMEG00000002000	-	65	36.283	ENSOMEG00000002272	-	53	43.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000002000	-	69	66.871	ENSAOCG00000015951	-	96	66.871	Amphiprion_ocellaris
ENSOMEG00000002000	-	67	61.111	ENSAOCG00000015914	-	64	61.111	Amphiprion_ocellaris
ENSOMEG00000002000	-	67	61.111	ENSAPEG00000002224	-	74	61.111	Amphiprion_percula
ENSOMEG00000002000	-	69	66.871	ENSAPEG00000002274	-	96	66.871	Amphiprion_percula
ENSOMEG00000002000	-	69	62.037	ENSACLG00000008978	-	82	62.037	Astatotilapia_calliptera
ENSOMEG00000002000	-	69	60.000	ENSCVAG00000008324	-	89	60.000	Cyprinodon_variegatus
ENSOMEG00000002000	-	59	45.402	FBgn0004237	Hrb87F	50	45.402	Drosophila_melanogaster
ENSOMEG00000002000	-	59	46.512	FBgn0001215	Hrb98DE	75	39.394	Drosophila_melanogaster
ENSOMEG00000002000	-	60	39.355	ENSEBUG00000010003	-	90	39.355	Eptatretus_burgeri
ENSOMEG00000002000	-	60	57.831	ENSELUG00000014407	-	97	57.831	Esox_lucius
ENSOMEG00000002000	-	69	62.037	ENSHBUG00000023867	-	82	62.037	Haplochromis_burtoni
ENSOMEG00000002000	-	62	58.333	ENSHCOG00000007180	-	77	57.923	Hippocampus_comes
ENSOMEG00000002000	-	73	57.143	ENSLBEG00000006362	-	79	57.143	Labrus_bergylta
ENSOMEG00000002000	-	57	58.407	ENSLOCG00000012121	-	65	58.407	Lepisosteus_oculatus
ENSOMEG00000002000	-	65	61.111	ENSMAMG00000017728	-	67	61.111	Mastacembelus_armatus
ENSOMEG00000002000	-	69	62.037	ENSMZEG00005001063	-	80	62.037	Maylandia_zebra
ENSOMEG00000002000	-	60	63.636	ENSMMOG00000004242	-	98	63.636	Mola_mola
ENSOMEG00000002000	-	62	40.805	ENSMEUG00000003051	-	63	38.860	Notamacropus_eugenii
ENSOMEG00000002000	-	86	65.714	ENSORLG00000023542	-	96	66.092	Oryzias_latipes
ENSOMEG00000002000	-	79	58.647	ENSORLG00000030284	-	75	58.647	Oryzias_latipes
ENSOMEG00000002000	-	87	64.641	ENSORLG00000023176	-	98	65.000	Oryzias_latipes
ENSOMEG00000002000	-	85	66.279	ENSORLG00020006029	-	94	66.279	Oryzias_latipes_hni
ENSOMEG00000002000	-	69	59.615	ENSORLG00020007171	-	97	59.615	Oryzias_latipes_hni
ENSOMEG00000002000	-	62	63.804	ENSORLG00020007084	-	74	63.804	Oryzias_latipes_hni
ENSOMEG00000002000	-	69	63.889	ENSPREG00000010603	-	59	63.889	Poecilia_reticulata
ENSOMEG00000002000	-	69	62.037	ENSPNYG00000020763	-	82	62.037	Pundamilia_nyererei
ENSOMEG00000002000	-	54	57.317	ENSPNAG00000018051	-	80	57.317	Pygocentrus_nattereri
ENSOMEG00000002000	-	60	55.491	ENSSHAG00000015609	-	81	55.491	Sarcophilus_harrisii
ENSOMEG00000002000	-	69	57.292	ENSSDUG00000002394	-	87	57.292	Seriola_dumerili
ENSOMEG00000002000	-	68	66.013	ENSSLDG00000024685	-	85	66.447	Seriola_lalandi_dorsalis