EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000002066 (Gene tree)
Gene ID: 112145118
Gene Symbol: SNRPN
Alias: -
Full Name: small nuclear ribonucleoprotein-associated protein B'
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 4692 bases
Position: chrNVQA01000009.1:21101626-21106317
Accession: 112145118
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000022489	LSM	PF01423.22	9.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000014621	SNRPN-201	2356	-	ENSOMEP00000022489	240 (aa)	XP_024125934	UPI000CF7EC6F

Gene Model

Click here to download ENSOMEG00000002066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000002066's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000002066	SNRPN	70	94.083	ENSG00000128739	SNRPN	100	98.305	Homo_sapiens
ENSOMEG00000002066	SNRPN	69	94.012	ENSAMEG00000007034	SNRPN	72	92.571	Ailuropoda_melanoleuca
ENSOMEG00000002066	SNRPN	96	78.707	ENSANAG00000034241	SNRPN	73	93.750	Aotus_nancymaae
ENSOMEG00000002066	SNRPN	75	91.257	ENSBTAG00000008251	SNRPN	78	90.751	Bos_taurus
ENSOMEG00000002066	SNRPN	69	94.048	ENSCJAG00000003759	-	74	92.655	Callithrix_jacchus
ENSOMEG00000002066	SNRPN	69	93.452	ENSCJAG00000042622	-	74	92.090	Callithrix_jacchus
ENSOMEG00000002066	SNRPN	69	94.048	ENSCAFG00000010127	SNRPN	73	92.614	Canis_familiaris
ENSOMEG00000002066	SNRPN	69	94.048	ENSCAFG00020024075	SNRPN	73	92.614	Canis_lupus_dingo
ENSOMEG00000002066	SNRPN	75	91.257	ENSCHIG00000017477	SNRPN	79	91.160	Capra_hircus
ENSOMEG00000002066	SNRPN	69	94.048	ENSTSYG00000005248	SNRPN	74	92.655	Carlito_syrichta
ENSOMEG00000002066	SNRPN	69	94.048	ENSCAPG00000003047	SNRPN	74	92.655	Cavia_aperea
ENSOMEG00000002066	SNRPN	69	94.048	ENSCPOG00000020270	SNRPN	74	92.655	Cavia_porcellus
ENSOMEG00000002066	SNRPN	69	94.048	ENSCCAG00000024231	SNRPN	74	92.655	Cebus_capucinus
ENSOMEG00000002066	SNRPN	69	94.048	ENSCATG00000032518	SNRPN	74	92.655	Cercocebus_atys
ENSOMEG00000002066	SNRPN	69	94.048	ENSCLAG00000011376	SNRPN	74	92.655	Chinchilla_lanigera
ENSOMEG00000002066	SNRPN	69	94.048	ENSCSAG00000006406	SNRPN	74	92.655	Chlorocebus_sabaeus
ENSOMEG00000002066	SNRPN	67	93.827	ENSCHOG00000001846	SNRPN	64	92.398	Choloepus_hoffmanni
ENSOMEG00000002066	SNRPN	69	94.048	ENSCANG00000041156	SNRPN	74	92.655	Colobus_angolensis_palliatus
ENSOMEG00000002066	SNRPN	69	93.452	ENSCGRG00001004136	Snrpn	74	92.090	Cricetulus_griseus_chok1gshd
ENSOMEG00000002066	SNRPN	69	94.048	ENSCGRG00000001621	Snrpn	74	92.655	Cricetulus_griseus_crigri
ENSOMEG00000002066	SNRPN	100	97.925	ENSCVAG00000014193	SNRPN	100	97.925	Cyprinodon_variegatus
ENSOMEG00000002066	SNRPN	69	93.413	ENSDNOG00000037060	SNRPN	72	92.614	Dasypus_novemcinctus
ENSOMEG00000002066	SNRPN	69	94.048	ENSDORG00000004527	Snrpn	74	92.655	Dipodomys_ordii
ENSOMEG00000002066	SNRPN	69	94.048	ENSEASG00005017871	SNRPN	73	92.614	Equus_asinus_asinus
ENSOMEG00000002066	SNRPN	69	94.048	ENSECAG00000018148	SNRPN	73	92.614	Equus_caballus
ENSOMEG00000002066	SNRPN	69	93.413	ENSEEUG00000007440	-	73	93.143	Erinaceus_europaeus
ENSOMEG00000002066	SNRPN	69	94.048	ENSFCAG00000022298	-	74	92.614	Felis_catus
ENSOMEG00000002066	SNRPN	69	94.048	ENSFDAG00000016578	-	74	92.655	Fukomys_damarensis
ENSOMEG00000002066	SNRPN	75	81.667	ENSGMOG00000018161	SNRPN	79	81.461	Gadus_morhua
ENSOMEG00000002066	SNRPN	58	80.576	ENSGGOG00000024469	-	76	70.588	Gorilla_gorilla
ENSOMEG00000002066	SNRPN	69	94.048	ENSGGOG00000003988	SNRPN	74	92.655	Gorilla_gorilla
ENSOMEG00000002066	SNRPN	69	94.048	ENSHGLG00000011924	SNRPN	74	92.655	Heterocephalus_glaber_female
ENSOMEG00000002066	SNRPN	98	70.638	ENSHGLG00000020936	-	95	66.359	Heterocephalus_glaber_female
ENSOMEG00000002066	SNRPN	86	81.643	ENSHGLG00000019812	-	73	90.857	Heterocephalus_glaber_female
ENSOMEG00000002066	SNRPN	99	73.750	ENSHGLG00000002327	-	73	77.095	Heterocephalus_glaber_female
ENSOMEG00000002066	SNRPN	86	81.643	ENSHGLG00100021056	-	73	90.857	Heterocephalus_glaber_male
ENSOMEG00000002066	SNRPN	69	94.048	ENSHGLG00100016559	SNRPN	74	92.655	Heterocephalus_glaber_male
ENSOMEG00000002066	SNRPN	99	75.314	ENSHGLG00100004881	-	73	77.528	Heterocephalus_glaber_male
ENSOMEG00000002066	SNRPN	69	94.048	ENSSTOG00000001339	SNRPN	74	92.655	Ictidomys_tridecemlineatus
ENSOMEG00000002066	SNRPN	69	94.012	ENSLAFG00000009458	SNRPN	73	92.614	Loxodonta_africana
ENSOMEG00000002066	SNRPN	69	94.048	ENSMFAG00000042235	SNRPN	74	92.655	Macaca_fascicularis
ENSOMEG00000002066	SNRPN	69	94.048	ENSMMUG00000023139	SNURF	74	92.655	Macaca_mulatta
ENSOMEG00000002066	SNRPN	69	94.048	ENSMNEG00000031291	SNRPN	74	92.655	Macaca_nemestrina
ENSOMEG00000002066	SNRPN	69	94.048	ENSMLEG00000038837	SNRPN	74	92.655	Mandrillus_leucophaeus
ENSOMEG00000002066	SNRPN	69	89.222	ENSMGAG00000008696	SNRPN	73	86.932	Meleagris_gallopavo
ENSOMEG00000002066	SNRPN	69	94.048	ENSMAUG00000000051	Snrpn	77	92.655	Mesocricetus_auratus
ENSOMEG00000002066	SNRPN	69	94.048	ENSMICG00000042356	SNRPN	74	92.655	Microcebus_murinus
ENSOMEG00000002066	SNRPN	69	94.048	ENSMOCG00000015350	Snrpn	74	92.655	Microtus_ochrogaster
ENSOMEG00000002066	SNRPN	69	95.833	ENSMODG00000013926	-	74	94.350	Monodelphis_domestica
ENSOMEG00000002066	SNRPN	69	94.048	MGP_CAROLIEiJ_G0029815	Snrpn	74	92.655	Mus_caroli
ENSOMEG00000002066	SNRPN	69	94.048	ENSMUSG00000102252	Snrpn	74	92.655	Mus_musculus
ENSOMEG00000002066	SNRPN	69	94.048	MGP_PahariEiJ_G0013040	Snrpn	74	92.655	Mus_pahari
ENSOMEG00000002066	SNRPN	69	94.048	MGP_SPRETEiJ_G0030918	Snrpn	74	92.655	Mus_spretus
ENSOMEG00000002066	SNRPN	95	48.908	ENSMPUG00000007115	-	81	59.777	Mustela_putorius_furo
ENSOMEG00000002066	SNRPN	69	94.048	ENSMPUG00000014638	-	73	92.614	Mustela_putorius_furo
ENSOMEG00000002066	SNRPN	59	69.014	ENSMLUG00000024428	-	64	67.626	Myotis_lucifugus
ENSOMEG00000002066	SNRPN	66	60.377	ENSMLUG00000025849	-	58	67.460	Myotis_lucifugus
ENSOMEG00000002066	SNRPN	69	94.012	ENSMLUG00000023361	-	72	92.571	Myotis_lucifugus
ENSOMEG00000002066	SNRPN	69	94.048	ENSNGAG00000000181	Snrpn	74	92.655	Nannospalax_galili
ENSOMEG00000002066	SNRPN	92	73.543	ENSNLEG00000001376	SNRPN	92	68.778	Nomascus_leucogenys
ENSOMEG00000002066	SNRPN	96	75.000	ENSODEG00000016065	-	79	82.955	Octodon_degus
ENSOMEG00000002066	SNRPN	69	93.452	ENSODEG00000019708	-	74	92.090	Octodon_degus
ENSOMEG00000002066	SNRPN	69	94.048	ENSODEG00000013478	-	74	92.655	Octodon_degus
ENSOMEG00000002066	SNRPN	69	93.452	ENSODEG00000020110	-	74	92.090	Octodon_degus
ENSOMEG00000002066	SNRPN	88	87.500	ENSOCUG00000003532	-	73	92.655	Oryctolagus_cuniculus
ENSOMEG00000002066	SNRPN	100	99.583	ENSORLG00020007490	SNRPN	100	99.583	Oryzias_latipes_hni
ENSOMEG00000002066	SNRPN	100	99.583	ENSORLG00015003332	SNRPN	100	99.583	Oryzias_latipes_hsok
ENSOMEG00000002066	SNRPN	69	94.048	ENSOGAG00000007392	SNRPN	74	92.655	Otolemur_garnettii
ENSOMEG00000002066	SNRPN	75	91.257	ENSOARG00000009080	SNRPN	75	91.160	Ovis_aries
ENSOMEG00000002066	SNRPN	69	94.048	ENSPPAG00000027650	SNRPN	74	92.655	Pan_paniscus
ENSOMEG00000002066	SNRPN	97	62.232	ENSPPAG00000034049	-	70	70.175	Pan_paniscus
ENSOMEG00000002066	SNRPN	69	94.048	ENSPPRG00000019878	-	73	92.614	Panthera_pardus
ENSOMEG00000002066	SNRPN	85	61.165	ENSPPRG00000006957	-	77	66.667	Panthera_pardus
ENSOMEG00000002066	SNRPN	69	95.238	ENSPTIG00000004537	SNRPN	73	92.614	Panthera_tigris_altaica
ENSOMEG00000002066	SNRPN	69	94.048	ENSPTRG00000006826	SNRPN	74	92.655	Pan_troglodytes
ENSOMEG00000002066	SNRPN	97	62.661	ENSPTRG00000052400	-	70	70.760	Pan_troglodytes
ENSOMEG00000002066	SNRPN	69	94.048	ENSPANG00000020142	SNRPN	74	92.655	Papio_anubis
ENSOMEG00000002066	SNRPN	69	78.571	ENSPEMG00000013920	-	72	80.226	Peromyscus_maniculatus_bairdii
ENSOMEG00000002066	SNRPN	69	91.667	ENSPEMG00000020979	-	74	90.395	Peromyscus_maniculatus_bairdii
ENSOMEG00000002066	SNRPN	69	94.048	ENSPEMG00000012911	-	74	92.655	Peromyscus_maniculatus_bairdii
ENSOMEG00000002066	SNRPN	69	93.413	ENSPCIG00000004699	-	56	92.614	Phascolarctos_cinereus
ENSOMEG00000002066	SNRPN	100	98.750	ENSPMEG00000020674	SNRPN	100	98.750	Poecilia_mexicana
ENSOMEG00000002066	SNRPN	69	94.048	ENSPPYG00000006269	SNURF	74	92.655	Pongo_abelii
ENSOMEG00000002066	SNRPN	69	94.048	ENSPCOG00000014231	SNRPN	74	92.655	Propithecus_coquereli
ENSOMEG00000002066	SNRPN	69	94.048	ENSRNOG00000059764	Snrpn	74	92.655	Rattus_norvegicus
ENSOMEG00000002066	SNRPN	69	94.048	ENSRBIG00000041765	SNRPN	74	92.655	Rhinopithecus_bieti
ENSOMEG00000002066	SNRPN	69	94.048	ENSRROG00000035157	SNRPN	74	92.655	Rhinopithecus_roxellana
ENSOMEG00000002066	SNRPN	73	93.182	ENSSBOG00000024929	-	73	92.045	Saimiri_boliviensis_boliviensis
ENSOMEG00000002066	SNRPN	69	94.048	ENSSBOG00000000110	-	74	92.655	Saimiri_boliviensis_boliviensis
ENSOMEG00000002066	SNRPN	69	92.857	ENSSHAG00000010257	-	73	92.655	Sarcophilus_harrisii
ENSOMEG00000002066	SNRPN	98	70.293	ENSSARG00000000072	SNRPN	99	70.293	Sorex_araneus
ENSOMEG00000002066	SNRPN	69	94.048	ENSSSCG00000028124	SNRPN	76	92.614	Sus_scrofa
ENSOMEG00000002066	SNRPN	75	91.257	ENSTTRG00000010966	SNRPN	67	91.160	Tursiops_truncatus
ENSOMEG00000002066	SNRPN	67	93.827	ENSUAMG00000016284	SNRPN	59	92.353	Ursus_americanus
ENSOMEG00000002066	SNRPN	69	94.048	ENSUMAG00000025589	SNRPN	73	92.614	Ursus_maritimus
ENSOMEG00000002066	SNRPN	69	94.048	ENSVVUG00000017971	SNRPN	72	92.614	Vulpes_vulpes