EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000002094 (Gene tree)
Gene ID: -
Gene Symbol: urb1
Alias: -
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 17754 bases
Position: chrNVQA01000013.1:20112077-20129830
Accession: ZDB-GENE-030131-5181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000022499	Npa1	PF11707.8	6.1e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000014588	-	4549	-	ENSOMEP00000022499	1516 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000002094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000002094's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000002094	urb1	98	50.585	ENSG00000142207	URB1	77	50.585	Homo_sapiens
ENSOMEG00000002094	urb1	99	77.700	ENSAPOG00000020308	urb1	78	77.700	Acanthochromis_polyacanthus
ENSOMEG00000002094	urb1	97	52.241	ENSAMEG00000011998	URB1	78	52.241	Ailuropoda_melanoleuca
ENSOMEG00000002094	urb1	97	68.148	ENSACIG00000003248	urb1	79	68.148	Amphilophus_citrinellus
ENSOMEG00000002094	urb1	98	66.427	ENSAOCG00000010364	urb1	82	66.427	Amphiprion_ocellaris
ENSOMEG00000002094	urb1	98	67.074	ENSAPEG00000010758	urb1	84	67.040	Amphiprion_percula
ENSOMEG00000002094	urb1	99	66.930	ENSATEG00000011790	urb1	81	66.930	Anabas_testudineus
ENSOMEG00000002094	urb1	96	59.062	ENSAPLG00000012791	URB1	81	50.846	Anas_platyrhynchos
ENSOMEG00000002094	urb1	97	54.326	ENSACAG00000002817	URB1	75	55.000	Anolis_carolinensis
ENSOMEG00000002094	urb1	97	51.297	ENSANAG00000024617	URB1	77	51.297	Aotus_nancymaae
ENSOMEG00000002094	urb1	98	69.231	ENSACLG00000024865	urb1	77	69.231	Astatotilapia_calliptera
ENSOMEG00000002094	urb1	99	58.607	ENSAMXG00000012306	urb1	79	51.462	Astyanax_mexicanus
ENSOMEG00000002094	urb1	98	51.059	ENSBTAG00000012412	URB1	77	51.059	Bos_taurus
ENSOMEG00000002094	urb1	98	50.822	ENSCJAG00000009118	URB1	76	49.767	Callithrix_jacchus
ENSOMEG00000002094	urb1	97	51.415	ENSCAFG00000008892	URB1	76	51.415	Canis_familiaris
ENSOMEG00000002094	urb1	98	50.584	ENSCAFG00020025987	-	77	50.584	Canis_lupus_dingo
ENSOMEG00000002094	urb1	98	50.932	ENSCAFG00020025994	-	76	50.932	Canis_lupus_dingo
ENSOMEG00000002094	urb1	98	51.176	ENSCHIG00000015645	URB1	77	51.176	Capra_hircus
ENSOMEG00000002094	urb1	98	50.354	ENSTSYG00000013286	URB1	77	50.354	Carlito_syrichta
ENSOMEG00000002094	urb1	97	48.288	ENSCAPG00000015589	URB1	78	48.288	Cavia_aperea
ENSOMEG00000002094	urb1	98	50.226	ENSCPOG00000006748	URB1	78	49.775	Cavia_porcellus
ENSOMEG00000002094	urb1	97	50.946	ENSCCAG00000021299	URB1	77	50.827	Cebus_capucinus
ENSOMEG00000002094	urb1	98	51.288	ENSCATG00000042630	URB1	77	51.288	Cercocebus_atys
ENSOMEG00000002094	urb1	98	49.719	ENSCLAG00000005262	URB1	81	49.719	Chinchilla_lanigera
ENSOMEG00000002094	urb1	98	49.156	ENSCSAG00000009584	URB1	78	49.156	Chlorocebus_sabaeus
ENSOMEG00000002094	urb1	97	57.000	ENSCPBG00000006454	URB1	73	57.000	Chrysemys_picta_bellii
ENSOMEG00000002094	urb1	98	50.057	ENSCANG00000031088	URB1	78	50.057	Colobus_angolensis_palliatus
ENSOMEG00000002094	urb1	98	50.118	ENSCGRG00001010616	Urb1	77	50.000	Cricetulus_griseus_chok1gshd
ENSOMEG00000002094	urb1	97	50.782	ENSCGRG00000015840	Urb1	77	50.782	Cricetulus_griseus_crigri
ENSOMEG00000002094	urb1	98	67.436	ENSCSEG00000012616	urb1	78	67.436	Cynoglossus_semilaevis
ENSOMEG00000002094	urb1	99	77.419	ENSCVAG00000009076	urb1	84	77.419	Cyprinodon_variegatus
ENSOMEG00000002094	urb1	98	61.336	ENSDARG00000060308	urb1	77	61.538	Danio_rerio
ENSOMEG00000002094	urb1	92	51.030	ENSDNOG00000015586	URB1	87	51.030	Dasypus_novemcinctus
ENSOMEG00000002094	urb1	97	50.769	ENSDORG00000006735	Urb1	78	50.769	Dipodomys_ordii
ENSOMEG00000002094	urb1	95	52.569	ENSETEG00000009080	URB1	74	52.569	Echinops_telfairi
ENSOMEG00000002094	urb1	96	58.333	ENSEASG00005007711	URB1	72	58.333	Equus_asinus_asinus
ENSOMEG00000002094	urb1	97	51.412	ENSECAG00000013206	URB1	81	47.576	Equus_caballus
ENSOMEG00000002094	urb1	97	69.366	ENSELUG00000020516	urb1	73	69.366	Esox_lucius
ENSOMEG00000002094	urb1	97	50.941	ENSFCAG00000002177	URB1	76	50.941	Felis_catus
ENSOMEG00000002094	urb1	93	55.000	ENSFALG00000004636	URB1	69	55.000	Ficedula_albicollis
ENSOMEG00000002094	urb1	98	49.379	ENSFDAG00000007288	URB1	75	49.379	Fukomys_damarensis
ENSOMEG00000002094	urb1	97	67.044	ENSFHEG00000000202	urb1	77	67.421	Fundulus_heteroclitus
ENSOMEG00000002094	urb1	93	56.287	ENSGMOG00000001838	urb1	74	56.287	Gadus_morhua
ENSOMEG00000002094	urb1	97	51.752	ENSGALG00000015887	URB1	77	51.752	Gallus_gallus
ENSOMEG00000002094	urb1	99	68.856	ENSGAFG00000020694	urb1	83	67.125	Gambusia_affinis
ENSOMEG00000002094	urb1	99	78.788	ENSGACG00000011703	urb1	81	78.788	Gasterosteus_aculeatus
ENSOMEG00000002094	urb1	97	56.800	ENSGAGG00000022544	URB1	73	56.800	Gopherus_agassizii
ENSOMEG00000002094	urb1	98	50.468	ENSGGOG00000000285	URB1	77	50.468	Gorilla_gorilla
ENSOMEG00000002094	urb1	99	69.112	ENSHBUG00000001904	urb1	77	69.112	Haplochromis_burtoni
ENSOMEG00000002094	urb1	98	54.890	ENSHGLG00000004907	URB1	78	54.563	Heterocephalus_glaber_female
ENSOMEG00000002094	urb1	98	49.436	ENSHGLG00100010749	URB1	78	49.436	Heterocephalus_glaber_male
ENSOMEG00000002094	urb1	92	66.510	ENSHCOG00000018683	urb1	92	66.627	Hippocampus_comes
ENSOMEG00000002094	urb1	99	50.415	ENSIPUG00000014721	urb1	78	50.415	Ictalurus_punctatus
ENSOMEG00000002094	urb1	97	50.580	ENSSTOG00000004539	URB1	76	50.405	Ictidomys_tridecemlineatus
ENSOMEG00000002094	urb1	96	75.556	ENSKMAG00000006001	urb1	87	71.710	Kryptolebias_marmoratus
ENSOMEG00000002094	urb1	98	66.327	ENSLBEG00000027208	urb1	84	66.327	Labrus_bergylta
ENSOMEG00000002094	urb1	97	54.092	ENSLACG00000017059	URB1	72	53.892	Latimeria_chalumnae
ENSOMEG00000002094	urb1	98	60.617	ENSLOCG00000009190	urb1	77	60.617	Lepisosteus_oculatus
ENSOMEG00000002094	urb1	97	51.373	ENSLAFG00000010407	URB1	77	51.373	Loxodonta_africana
ENSOMEG00000002094	urb1	98	50.937	ENSMFAG00000034391	URB1	75	50.937	Macaca_fascicularis
ENSOMEG00000002094	urb1	98	50.937	ENSMMUG00000010295	URB1	77	50.937	Macaca_mulatta
ENSOMEG00000002094	urb1	98	49.647	ENSMNEG00000032981	URB1	77	49.647	Macaca_nemestrina
ENSOMEG00000002094	urb1	98	51.171	ENSMLEG00000041435	URB1	77	51.171	Mandrillus_leucophaeus
ENSOMEG00000002094	urb1	97	72.727	ENSMAMG00000011238	urb1	78	72.727	Mastacembelus_armatus
ENSOMEG00000002094	urb1	98	63.075	ENSMZEG00005011862	urb1	77	63.075	Maylandia_zebra
ENSOMEG00000002094	urb1	96	57.469	ENSMGAG00000014512	URB1	74	57.469	Meleagris_gallopavo
ENSOMEG00000002094	urb1	86	48.012	ENSMAUG00000010516	Urb1	73	48.012	Mesocricetus_auratus
ENSOMEG00000002094	urb1	98	51.006	ENSMICG00000016424	URB1	77	49.941	Microcebus_murinus
ENSOMEG00000002094	urb1	97	50.118	ENSMOCG00000012613	Urb1	76	50.118	Microtus_ochrogaster
ENSOMEG00000002094	urb1	97	49.823	ENSMODG00000021076	URB1	77	50.648	Monodelphis_domestica
ENSOMEG00000002094	urb1	98	70.944	ENSMALG00000017411	urb1	80	70.944	Monopterus_albus
ENSOMEG00000002094	urb1	97	50.410	MGP_CAROLIEiJ_G0020948	Urb1	76	50.410	Mus_caroli
ENSOMEG00000002094	urb1	97	49.707	ENSMUSG00000039929	Urb1	76	49.707	Mus_musculus
ENSOMEG00000002094	urb1	97	50.231	MGP_PahariEiJ_G0016653	Urb1	77	50.231	Mus_pahari
ENSOMEG00000002094	urb1	97	50.410	MGP_SPRETEiJ_G0021854	Urb1	76	50.410	Mus_spretus
ENSOMEG00000002094	urb1	97	50.353	ENSMPUG00000001123	URB1	77	50.353	Mustela_putorius_furo
ENSOMEG00000002094	urb1	98	50.898	ENSNGAG00000001905	Urb1	77	51.737	Nannospalax_galili
ENSOMEG00000002094	urb1	74	69.855	ENSNBRG00000001049	urb1	73	69.855	Neolamprologus_brichardi
ENSOMEG00000002094	urb1	94	50.000	ENSNLEG00000026872	URB1	74	50.000	Nomascus_leucogenys
ENSOMEG00000002094	urb1	89	57.088	ENSMEUG00000010828	URB1	73	48.255	Notamacropus_eugenii
ENSOMEG00000002094	urb1	98	48.256	ENSOPRG00000013482	URB1	78	48.256	Ochotona_princeps
ENSOMEG00000002094	urb1	98	50.971	ENSODEG00000002587	URB1	82	50.971	Octodon_degus
ENSOMEG00000002094	urb1	99	69.395	ENSONIG00000005599	urb1	77	69.395	Oreochromis_niloticus
ENSOMEG00000002094	urb1	98	51.300	ENSOCUG00000009381	URB1	77	51.300	Oryctolagus_cuniculus
ENSOMEG00000002094	urb1	99	84.848	ENSORLG00000003429	urb1	80	84.848	Oryzias_latipes
ENSOMEG00000002094	urb1	99	84.848	ENSORLG00020013785	urb1	80	84.848	Oryzias_latipes_hni
ENSOMEG00000002094	urb1	99	84.848	ENSORLG00015019421	urb1	80	84.848	Oryzias_latipes_hsok
ENSOMEG00000002094	urb1	98	51.834	ENSOGAG00000017140	URB1	77	50.881	Otolemur_garnettii
ENSOMEG00000002094	urb1	90	50.471	ENSOARG00000013679	URB1	74	50.293	Ovis_aries
ENSOMEG00000002094	urb1	98	50.585	ENSPPAG00000003423	URB1	77	50.585	Pan_paniscus
ENSOMEG00000002094	urb1	97	51.176	ENSPPRG00000023131	URB1	76	51.176	Panthera_pardus
ENSOMEG00000002094	urb1	97	48.987	ENSPTIG00000016125	URB1	81	48.987	Panthera_tigris_altaica
ENSOMEG00000002094	urb1	98	50.468	ENSPTRG00000013852	URB1	77	50.468	Pan_troglodytes
ENSOMEG00000002094	urb1	98	51.054	ENSPANG00000021964	URB1	77	51.054	Papio_anubis
ENSOMEG00000002094	urb1	98	57.547	ENSPKIG00000003683	urb1	77	57.547	Paramormyrops_kingsleyae
ENSOMEG00000002094	urb1	98	50.352	ENSPEMG00000021205	Urb1	76	50.352	Peromyscus_maniculatus_bairdii
ENSOMEG00000002094	urb1	79	35.655	ENSPMAG00000009733	URB1	79	35.933	Petromyzon_marinus
ENSOMEG00000002094	urb1	98	49.649	ENSPCIG00000016350	URB1	79	50.468	Phascolarctos_cinereus
ENSOMEG00000002094	urb1	95	70.529	ENSPLAG00000004371	urb1	79	70.403	Poecilia_latipinna
ENSOMEG00000002094	urb1	99	70.498	ENSPMEG00000006634	urb1	80	70.498	Poecilia_mexicana
ENSOMEG00000002094	urb1	99	69.622	ENSPREG00000013453	urb1	79	69.622	Poecilia_reticulata
ENSOMEG00000002094	urb1	98	49.649	ENSPPYG00000011359	URB1	77	49.649	Pongo_abelii
ENSOMEG00000002094	urb1	98	51.163	ENSPCAG00000007430	URB1	78	51.163	Procavia_capensis
ENSOMEG00000002094	urb1	98	51.415	ENSPCOG00000022695	URB1	77	51.415	Propithecus_coquereli
ENSOMEG00000002094	urb1	98	51.122	ENSPVAG00000000889	URB1	77	51.122	Pteropus_vampyrus
ENSOMEG00000002094	urb1	99	69.249	ENSPNYG00000010589	urb1	81	69.249	Pundamilia_nyererei
ENSOMEG00000002094	urb1	98	52.515	ENSPNAG00000019324	urb1	79	60.241	Pygocentrus_nattereri
ENSOMEG00000002094	urb1	98	49.707	ENSRNOG00000002080	Urb1	77	49.707	Rattus_norvegicus
ENSOMEG00000002094	urb1	98	50.825	ENSRBIG00000033122	URB1	77	50.825	Rhinopithecus_bieti
ENSOMEG00000002094	urb1	98	50.825	ENSRROG00000040237	URB1	77	50.825	Rhinopithecus_roxellana
ENSOMEG00000002094	urb1	98	51.174	ENSSBOG00000027672	URB1	77	50.117	Saimiri_boliviensis_boliviensis
ENSOMEG00000002094	urb1	97	49.059	ENSSHAG00000005140	URB1	77	49.882	Sarcophilus_harrisii
ENSOMEG00000002094	urb1	98	58.353	ENSSFOG00015000339	urb1	87	58.353	Scleropages_formosus
ENSOMEG00000002094	urb1	98	70.000	ENSSMAG00000003782	urb1	77	69.529	Scophthalmus_maximus
ENSOMEG00000002094	urb1	99	72.727	ENSSDUG00000012313	urb1	79	72.727	Seriola_dumerili
ENSOMEG00000002094	urb1	99	72.727	ENSSLDG00000023179	urb1	81	72.727	Seriola_lalandi_dorsalis
ENSOMEG00000002094	urb1	97	58.400	ENSSPUG00000012447	URB1	73	58.400	Sphenodon_punctatus
ENSOMEG00000002094	urb1	97	77.113	ENSSPAG00000006325	urb1	75	77.113	Stegastes_partitus
ENSOMEG00000002094	urb1	97	49.706	ENSSSCG00000032024	URB1	77	49.706	Sus_scrofa
ENSOMEG00000002094	urb1	79	56.410	ENSTGUG00000013442	URB1	82	56.410	Taeniopygia_guttata
ENSOMEG00000002094	urb1	97	65.995	ENSTRUG00000009372	urb1	77	65.995	Takifugu_rubripes
ENSOMEG00000002094	urb1	98	65.253	ENSTNIG00000016277	urb1	79	65.253	Tetraodon_nigroviridis
ENSOMEG00000002094	urb1	73	53.247	ENSTBEG00000010044	URB1	54	53.247	Tupaia_belangeri
ENSOMEG00000002094	urb1	91	48.910	ENSTTRG00000007712	URB1	74	48.910	Tursiops_truncatus
ENSOMEG00000002094	urb1	98	51.647	ENSUAMG00000012231	URB1	76	51.765	Ursus_americanus
ENSOMEG00000002094	urb1	97	56.679	ENSUMAG00000017419	URB1	85	54.938	Ursus_maritimus
ENSOMEG00000002094	urb1	97	54.669	ENSVVUG00000000551	URB1	75	54.669	Vulpes_vulpes
ENSOMEG00000002094	urb1	96	57.597	ENSXETG00000009895	urb1	74	57.597	Xenopus_tropicalis
ENSOMEG00000002094	urb1	99	69.855	ENSXCOG00000005500	urb1	80	69.855	Xiphophorus_couchianus
ENSOMEG00000002094	urb1	98	70.460	ENSXMAG00000007253	urb1	78	70.460	Xiphophorus_maculatus