EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000002219 (Gene tree)
Gene ID: 112144649
Gene Symbol: rbm5
Alias: -
Full Name: RNA-binding protein 5-B-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 12716 bases
Position: chrNVQA01000009.1:8679305-8692020
Accession: 112144649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000001298	zf-RanBP	PF00641.18	1.1e-10	1	1
ENSOMEP00000001316	zf-RanBP	PF00641.18	1.8e-10	1	1
ENSOMEP00000001298	RRM_1	PF00076.22	2.3e-12	1	1
ENSOMEP00000001316	RRM_1	PF00076.22	3e-12	1	1
ENSOMEP00000001298	G-patch	PF01585.23	3.1e-19	1	1
ENSOMEP00000001316	G-patch	PF01585.23	3.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000014380	-	3364	-	ENSOMEP00000001316	855 (aa)	XP_024125065	UPI000CF7D5B6
ENSOMET00000014398	-	2352	-	ENSOMEP00000001298	783 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000002219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000002219's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000002219	rbm5	83	43.742	ENSOMEG00000014309	rbm10	76	43.790
ENSOMEG00000002219	rbm5	80	56.260	ENSOMEG00000010653	-	89	69.792

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000002219	rbm5	100	61.111	ENSG00000003756	RBM5	100	61.476	Homo_sapiens
ENSOMEG00000002219	rbm5	100	85.215	ENSAPOG00000016625	rbm5	100	85.099	Acanthochromis_polyacanthus
ENSOMEG00000002219	rbm5	100	65.429	ENSAPOG00000006011	-	100	66.125	Acanthochromis_polyacanthus
ENSOMEG00000002219	rbm5	100	60.880	ENSAMEG00000012005	RBM5	100	61.476	Ailuropoda_melanoleuca
ENSOMEG00000002219	rbm5	74	76.570	ENSACIG00000007571	rbm5	100	85.106	Amphilophus_citrinellus
ENSOMEG00000002219	rbm5	99	61.958	ENSACIG00000021310	-	99	61.663	Amphilophus_citrinellus
ENSOMEG00000002219	rbm5	100	85.664	ENSAOCG00000002880	rbm5	100	85.664	Amphiprion_ocellaris
ENSOMEG00000002219	rbm5	99	62.593	ENSAOCG00000017312	-	99	63.321	Amphiprion_ocellaris
ENSOMEG00000002219	rbm5	100	65.353	ENSAPEG00000018222	RBM5	100	65.545	Amphiprion_percula
ENSOMEG00000002219	rbm5	90	83.850	ENSAPEG00000011862	rbm5	92	83.850	Amphiprion_percula
ENSOMEG00000002219	rbm5	100	65.063	ENSATEG00000003838	-	100	64.914	Anabas_testudineus
ENSOMEG00000002219	rbm5	100	82.964	ENSATEG00000024663	rbm5	100	84.168	Anabas_testudineus
ENSOMEG00000002219	rbm5	93	62.640	ENSAPLG00000011176	RBM5	99	63.060	Anas_platyrhynchos
ENSOMEG00000002219	rbm5	100	60.182	ENSACAG00000008580	RBM5	100	60.820	Anolis_carolinensis
ENSOMEG00000002219	rbm5	100	60.880	ENSANAG00000025199	RBM5	100	61.592	Aotus_nancymaae
ENSOMEG00000002219	rbm5	100	84.884	ENSACLG00000012748	rbm5	100	84.070	Astatotilapia_calliptera
ENSOMEG00000002219	rbm5	89	82.927	ENSACLG00000024198	RBM5	100	83.333	Astatotilapia_calliptera
ENSOMEG00000002219	rbm5	85	74.140	ENSAMXG00000008146	rbm5	100	74.348	Astyanax_mexicanus
ENSOMEG00000002219	rbm5	100	60.532	ENSBTAG00000006330	RBM5	100	61.592	Bos_taurus
ENSOMEG00000002219	rbm5	100	60.880	ENSCJAG00000004740	RBM5	100	61.592	Callithrix_jacchus
ENSOMEG00000002219	rbm5	100	60.995	ENSCAFG00000010866	RBM5	100	61.592	Canis_familiaris
ENSOMEG00000002219	rbm5	100	60.995	ENSCAFG00020022126	RBM5	100	61.592	Canis_lupus_dingo
ENSOMEG00000002219	rbm5	100	61.111	ENSCHIG00000018435	RBM5	100	61.707	Capra_hircus
ENSOMEG00000002219	rbm5	86	59.060	ENSTSYG00000004158	RBM5	100	59.759	Carlito_syrichta
ENSOMEG00000002219	rbm5	99	50.407	ENSCAPG00000013495	RBM5	99	51.995	Cavia_aperea
ENSOMEG00000002219	rbm5	100	60.859	ENSCPOG00000008151	RBM5	100	61.361	Cavia_porcellus
ENSOMEG00000002219	rbm5	99	60.780	ENSCCAG00000026401	RBM5	100	60.780	Cebus_capucinus
ENSOMEG00000002219	rbm5	100	60.995	ENSCATG00000041038	RBM5	100	61.592	Cercocebus_atys
ENSOMEG00000002219	rbm5	100	60.976	ENSCLAG00000007873	RBM5	100	61.592	Chinchilla_lanigera
ENSOMEG00000002219	rbm5	100	60.995	ENSCSAG00000014401	RBM5	100	61.592	Chlorocebus_sabaeus
ENSOMEG00000002219	rbm5	71	70.085	ENSCHOG00000009429	RBM5	72	70.085	Choloepus_hoffmanni
ENSOMEG00000002219	rbm5	92	62.013	ENSCPBG00000002406	RBM5	100	61.301	Chrysemys_picta_bellii
ENSOMEG00000002219	rbm5	100	60.367	ENSCANG00000031250	RBM5	100	60.710	Colobus_angolensis_palliatus
ENSOMEG00000002219	rbm5	100	61.707	ENSCGRG00001010543	Rbm5	100	61.822	Cricetulus_griseus_chok1gshd
ENSOMEG00000002219	rbm5	100	61.707	ENSCGRG00000008475	Rbm5	100	61.822	Cricetulus_griseus_crigri
ENSOMEG00000002219	rbm5	98	79.225	ENSCSEG00000000596	rbm5	97	80.186	Cynoglossus_semilaevis
ENSOMEG00000002219	rbm5	100	82.715	ENSCVAG00000005655	rbm5	100	82.831	Cyprinodon_variegatus
ENSOMEG00000002219	rbm5	100	61.970	ENSDARG00000098280	rbm5	100	68.197	Danio_rerio
ENSOMEG00000002219	rbm5	100	60.995	ENSDNOG00000011756	RBM5	100	61.361	Dasypus_novemcinctus
ENSOMEG00000002219	rbm5	100	60.880	ENSDORG00000007692	Rbm5	100	61.246	Dipodomys_ordii
ENSOMEG00000002219	rbm5	92	60.176	ENSETEG00000012773	RBM5	93	60.444	Echinops_telfairi
ENSOMEG00000002219	rbm5	90	49.931	ENSEBUG00000017034	rbm5	79	60.267	Eptatretus_burgeri
ENSOMEG00000002219	rbm5	100	60.995	ENSEASG00005011835	RBM5	100	61.592	Equus_asinus_asinus
ENSOMEG00000002219	rbm5	100	60.995	ENSECAG00000020447	RBM5	100	61.592	Equus_caballus
ENSOMEG00000002219	rbm5	80	71.569	ENSEEUG00000005943	RBM5	88	71.569	Erinaceus_europaeus
ENSOMEG00000002219	rbm5	100	74.742	ENSELUG00000022467	rbm5	100	74.027	Esox_lucius
ENSOMEG00000002219	rbm5	100	60.995	ENSFCAG00000014639	RBM5	100	61.476	Felis_catus
ENSOMEG00000002219	rbm5	99	59.221	ENSFALG00000008828	RBM5	83	62.687	Ficedula_albicollis
ENSOMEG00000002219	rbm5	100	61.298	ENSFDAG00000001897	RBM5	100	61.645	Fukomys_damarensis
ENSOMEG00000002219	rbm5	92	95.238	ENSFHEG00000015954	rbm5	100	95.238	Fundulus_heteroclitus
ENSOMEG00000002219	rbm5	99	72.418	ENSGMOG00000016224	rbm5	100	71.662	Gadus_morhua
ENSOMEG00000002219	rbm5	90	62.085	ENSGMOG00000007810	-	95	60.350	Gadus_morhua
ENSOMEG00000002219	rbm5	92	62.205	ENSGALG00000039288	RBM5	83	62.663	Gallus_gallus
ENSOMEG00000002219	rbm5	100	85.000	ENSGAFG00000010690	rbm5	100	85.000	Gambusia_affinis
ENSOMEG00000002219	rbm5	100	62.113	ENSGACG00000000858	-	100	62.227	Gasterosteus_aculeatus
ENSOMEG00000002219	rbm5	100	77.713	ENSGACG00000010469	rbm5	100	77.163	Gasterosteus_aculeatus
ENSOMEG00000002219	rbm5	87	62.252	ENSGAGG00000007935	RBM5	99	60.621	Gopherus_agassizii
ENSOMEG00000002219	rbm5	100	60.995	ENSGGOG00000014490	RBM5	100	61.592	Gorilla_gorilla
ENSOMEG00000002219	rbm5	89	82.927	ENSHBUG00000011901	-	100	83.333	Haplochromis_burtoni
ENSOMEG00000002219	rbm5	100	85.116	ENSHBUG00000001941	rbm5	100	84.535	Haplochromis_burtoni
ENSOMEG00000002219	rbm5	100	60.789	ENSHGLG00000014844	RBM5	100	61.406	Heterocephalus_glaber_female
ENSOMEG00000002219	rbm5	100	60.859	ENSHGLG00100010739	RBM5	100	61.476	Heterocephalus_glaber_male
ENSOMEG00000002219	rbm5	100	56.127	ENSHCOG00000004536	-	100	56.318	Hippocampus_comes
ENSOMEG00000002219	rbm5	96	76.063	ENSHCOG00000017110	rbm5	99	76.914	Hippocampus_comes
ENSOMEG00000002219	rbm5	100	72.538	ENSIPUG00000000640	rbm5	100	72.885	Ictalurus_punctatus
ENSOMEG00000002219	rbm5	100	61.111	ENSSTOG00000013856	RBM5	100	62.053	Ictidomys_tridecemlineatus
ENSOMEG00000002219	rbm5	100	61.938	ENSJJAG00000008844	Rbm5	100	61.938	Jaculus_jaculus
ENSOMEG00000002219	rbm5	100	84.615	ENSKMAG00000006663	rbm5	100	84.732	Kryptolebias_marmoratus
ENSOMEG00000002219	rbm5	100	81.564	ENSLBEG00000020858	rbm5	100	82.614	Labrus_bergylta
ENSOMEG00000002219	rbm5	100	61.618	ENSLBEG00000010877	-	94	61.387	Labrus_bergylta
ENSOMEG00000002219	rbm5	75	51.987	ENSLBEG00000002522	-	100	50.575	Labrus_bergylta
ENSOMEG00000002219	rbm5	90	69.355	ENSLACG00000016572	RBM5	100	63.743	Latimeria_chalumnae
ENSOMEG00000002219	rbm5	100	69.240	ENSLOCG00000010774	rbm5	100	69.353	Lepisosteus_oculatus
ENSOMEG00000002219	rbm5	100	60.880	ENSLAFG00000006733	RBM5	100	61.521	Loxodonta_africana
ENSOMEG00000002219	rbm5	100	60.995	ENSMFAG00000031609	RBM5	100	61.592	Macaca_fascicularis
ENSOMEG00000002219	rbm5	99	60.885	ENSMMUG00000004921	RBM5	99	61.485	Macaca_mulatta
ENSOMEG00000002219	rbm5	100	61.111	ENSMNEG00000044394	RBM5	100	61.707	Macaca_nemestrina
ENSOMEG00000002219	rbm5	99	60.767	ENSMLEG00000034689	RBM5	99	61.893	Mandrillus_leucophaeus
ENSOMEG00000002219	rbm5	100	84.088	ENSMAMG00000017277	rbm5	100	92.857	Mastacembelus_armatus
ENSOMEG00000002219	rbm5	100	67.090	ENSMAMG00000023948	-	99	66.244	Mastacembelus_armatus
ENSOMEG00000002219	rbm5	100	61.290	ENSMZEG00005010035	-	100	62.069	Maylandia_zebra
ENSOMEG00000002219	rbm5	100	84.884	ENSMZEG00005015328	rbm5	100	84.070	Maylandia_zebra
ENSOMEG00000002219	rbm5	92	62.598	ENSMGAG00000003972	RBM5	100	63.250	Meleagris_gallopavo
ENSOMEG00000002219	rbm5	99	61.369	ENSMAUG00000020572	Rbm5	98	61.485	Mesocricetus_auratus
ENSOMEG00000002219	rbm5	100	60.995	ENSMICG00000016179	RBM5	100	61.592	Microcebus_murinus
ENSOMEG00000002219	rbm5	100	61.246	ENSMOCG00000017479	Rbm5	100	61.707	Microtus_ochrogaster
ENSOMEG00000002219	rbm5	99	56.352	ENSMMOG00000021804	-	99	56.320	Mola_mola
ENSOMEG00000002219	rbm5	97	89.759	ENSMMOG00000015342	rbm5	93	89.759	Mola_mola
ENSOMEG00000002219	rbm5	100	60.532	ENSMODG00000012301	RBM5	100	61.476	Monodelphis_domestica
ENSOMEG00000002219	rbm5	100	63.899	ENSMALG00000016769	-	100	63.699	Monopterus_albus
ENSOMEG00000002219	rbm5	99	78.697	ENSMALG00000000609	rbm5	99	78.947	Monopterus_albus
ENSOMEG00000002219	rbm5	100	61.298	MGP_CAROLIEiJ_G0032660	Rbm5	90	72.857	Mus_caroli
ENSOMEG00000002219	rbm5	100	61.182	ENSMUSG00000032580	Rbm5	90	72.857	Mus_musculus
ENSOMEG00000002219	rbm5	100	61.298	MGP_PahariEiJ_G0015528	Rbm5	90	72.857	Mus_pahari
ENSOMEG00000002219	rbm5	100	61.182	MGP_SPRETEiJ_G0033805	Rbm5	96	69.128	Mus_spretus
ENSOMEG00000002219	rbm5	100	61.066	ENSMLUG00000007875	RBM5	100	61.778	Myotis_lucifugus
ENSOMEG00000002219	rbm5	100	60.669	ENSNGAG00000011777	Rbm5	100	61.476	Nannospalax_galili
ENSOMEG00000002219	rbm5	96	61.656	ENSNBRG00000004400	RBM5	97	62.613	Neolamprologus_brichardi
ENSOMEG00000002219	rbm5	100	85.349	ENSNBRG00000018097	rbm5	100	84.767	Neolamprologus_brichardi
ENSOMEG00000002219	rbm5	100	60.995	ENSNLEG00000006943	RBM5	100	61.592	Nomascus_leucogenys
ENSOMEG00000002219	rbm5	84	69.231	ENSMEUG00000012994	RBM5	100	57.491	Notamacropus_eugenii
ENSOMEG00000002219	rbm5	92	59.975	ENSOPRG00000015154	RBM5	93	60.549	Ochotona_princeps
ENSOMEG00000002219	rbm5	100	60.743	ENSODEG00000016254	-	100	61.361	Octodon_degus
ENSOMEG00000002219	rbm5	100	57.604	ENSODEG00000019111	-	100	58.939	Octodon_degus
ENSOMEG00000002219	rbm5	100	85.000	ENSONIG00000004107	rbm5	100	84.186	Oreochromis_niloticus
ENSOMEG00000002219	rbm5	100	62.081	ENSONIG00000019007	RBM5	100	62.860	Oreochromis_niloticus
ENSOMEG00000002219	rbm5	88	61.549	ENSOANG00000006557	RBM5	100	61.169	Ornithorhynchus_anatinus
ENSOMEG00000002219	rbm5	100	61.476	ENSOCUG00000011652	RBM5	100	61.476	Oryctolagus_cuniculus
ENSOMEG00000002219	rbm5	100	57.949	ENSORLG00000001053	-	100	56.442	Oryzias_latipes
ENSOMEG00000002219	rbm5	95	92.393	ENSORLG00000003369	rbm5	99	92.515	Oryzias_latipes
ENSOMEG00000002219	rbm5	100	92.047	ENSORLG00020021744	rbm5	100	92.515	Oryzias_latipes_hni
ENSOMEG00000002219	rbm5	96	56.490	ENSORLG00020006782	-	98	54.816	Oryzias_latipes_hni
ENSOMEG00000002219	rbm5	100	92.749	ENSORLG00015018379	rbm5	100	97.619	Oryzias_latipes_hsok
ENSOMEG00000002219	rbm5	96	56.747	ENSORLG00015002854	-	98	55.185	Oryzias_latipes_hsok
ENSOMEG00000002219	rbm5	92	61.596	ENSOGAG00000004205	RBM5	100	61.397	Otolemur_garnettii
ENSOMEG00000002219	rbm5	100	61.111	ENSOARG00000010923	RBM5	100	61.707	Ovis_aries
ENSOMEG00000002219	rbm5	100	60.995	ENSPPAG00000043010	RBM5	100	61.592	Pan_paniscus
ENSOMEG00000002219	rbm5	100	60.995	ENSPPRG00000005404	RBM5	100	61.476	Panthera_pardus
ENSOMEG00000002219	rbm5	100	60.995	ENSPTIG00000000962	RBM5	100	61.476	Panthera_tigris_altaica
ENSOMEG00000002219	rbm5	100	60.995	ENSPTRG00000014946	RBM5	100	61.592	Pan_troglodytes
ENSOMEG00000002219	rbm5	100	60.995	ENSPANG00000018507	RBM5	100	61.592	Papio_anubis
ENSOMEG00000002219	rbm5	75	61.003	ENSPKIG00000019187	-	100	60.577	Paramormyrops_kingsleyae
ENSOMEG00000002219	rbm5	100	70.011	ENSPKIG00000024837	RBM5	100	70.091	Paramormyrops_kingsleyae
ENSOMEG00000002219	rbm5	88	62.500	ENSPSIG00000016073	RBM5	100	62.632	Pelodiscus_sinensis
ENSOMEG00000002219	rbm5	88	82.051	ENSPMGG00000004719	-	99	80.952	Periophthalmus_magnuspinnatus
ENSOMEG00000002219	rbm5	77	65.742	ENSPMGG00000017347	rbm5	100	66.341	Periophthalmus_magnuspinnatus
ENSOMEG00000002219	rbm5	90	59.162	ENSPMAG00000001998	rbm5	99	44.622	Petromyzon_marinus
ENSOMEG00000002219	rbm5	100	60.532	ENSPCIG00000021531	RBM5	100	61.592	Phascolarctos_cinereus
ENSOMEG00000002219	rbm5	100	84.437	ENSPLAG00000006318	rbm5	100	84.437	Poecilia_latipinna
ENSOMEG00000002219	rbm5	74	72.300	ENSPMEG00000008651	rbm5	98	74.394	Poecilia_mexicana
ENSOMEG00000002219	rbm5	100	83.469	ENSPMEG00000004295	rbm5	100	84.070	Poecilia_mexicana
ENSOMEG00000002219	rbm5	100	84.884	ENSPREG00000003795	rbm5	100	84.884	Poecilia_reticulata
ENSOMEG00000002219	rbm5	58	61.712	ENSPCAG00000005459	RBM5	73	59.009	Procavia_capensis
ENSOMEG00000002219	rbm5	100	61.111	ENSPCOG00000025840	RBM5	100	61.476	Propithecus_coquereli
ENSOMEG00000002219	rbm5	100	58.796	ENSPVAG00000006812	RBM5	100	59.170	Pteropus_vampyrus
ENSOMEG00000002219	rbm5	84	63.411	ENSPNYG00000006361	RBM5	99	63.786	Pundamilia_nyererei
ENSOMEG00000002219	rbm5	100	85.233	ENSPNYG00000014787	rbm5	100	84.651	Pundamilia_nyererei
ENSOMEG00000002219	rbm5	100	72.633	ENSPNAG00000012070	rbm5	100	72.454	Pygocentrus_nattereri
ENSOMEG00000002219	rbm5	100	60.718	ENSRNOG00000018153	Rbm5	100	61.592	Rattus_norvegicus
ENSOMEG00000002219	rbm5	100	61.227	ENSRBIG00000012679	RBM5	100	61.822	Rhinopithecus_bieti
ENSOMEG00000002219	rbm5	100	61.324	ENSRROG00000041331	RBM5	100	61.822	Rhinopithecus_roxellana
ENSOMEG00000002219	rbm5	100	60.880	ENSSBOG00000006324	RBM5	100	61.592	Saimiri_boliviensis_boliviensis
ENSOMEG00000002219	rbm5	100	60.648	ENSSHAG00000018260	RBM5	100	60.914	Sarcophilus_harrisii
ENSOMEG00000002219	rbm5	100	68.234	ENSSFOG00015019645	-	100	69.954	Scleropages_formosus
ENSOMEG00000002219	rbm5	100	73.086	ENSSFOG00015019052	rbm5	94	73.117	Scleropages_formosus
ENSOMEG00000002219	rbm5	100	81.935	ENSSMAG00000017106	rbm5	100	82.284	Scophthalmus_maximus
ENSOMEG00000002219	rbm5	100	84.149	ENSSDUG00000019775	rbm5	100	84.732	Seriola_dumerili
ENSOMEG00000002219	rbm5	100	84.382	ENSSLDG00000002329	rbm5	100	84.965	Seriola_lalandi_dorsalis
ENSOMEG00000002219	rbm5	100	65.865	ENSSLDG00000015996	-	100	65.714	Seriola_lalandi_dorsalis
ENSOMEG00000002219	rbm5	51	77.922	ENSSARG00000009724	-	63	77.922	Sorex_araneus
ENSOMEG00000002219	rbm5	95	68.108	ENSSPUG00000001876	RBM5	85	62.065	Sphenodon_punctatus
ENSOMEG00000002219	rbm5	100	85.332	ENSSPAG00000019638	rbm5	100	85.681	Stegastes_partitus
ENSOMEG00000002219	rbm5	100	65.820	ENSSPAG00000020011	-	100	64.874	Stegastes_partitus
ENSOMEG00000002219	rbm5	92	71.429	ENSSSCG00000011395	RBM5	100	71.429	Sus_scrofa
ENSOMEG00000002219	rbm5	92	58.040	ENSTGUG00000006417	RBM5	98	58.406	Taeniopygia_guttata
ENSOMEG00000002219	rbm5	100	78.463	ENSTRUG00000008292	rbm5	99	80.914	Takifugu_rubripes
ENSOMEG00000002219	rbm5	88	77.737	ENSTNIG00000014742	rbm5	93	77.737	Tetraodon_nigroviridis
ENSOMEG00000002219	rbm5	100	55.093	ENSTBEG00000005424	RBM5	92	60.116	Tupaia_belangeri
ENSOMEG00000002219	rbm5	92	57.449	ENSTTRG00000007717	RBM5	100	56.847	Tursiops_truncatus
ENSOMEG00000002219	rbm5	100	60.880	ENSUAMG00000028347	RBM5	100	61.476	Ursus_americanus
ENSOMEG00000002219	rbm5	93	68.590	ENSUMAG00000022027	RBM5	100	61.476	Ursus_maritimus
ENSOMEG00000002219	rbm5	90	58.184	ENSVPAG00000009388	RBM5	100	59.363	Vicugna_pacos
ENSOMEG00000002219	rbm5	100	60.995	ENSVVUG00000028647	RBM5	100	61.592	Vulpes_vulpes
ENSOMEG00000002219	rbm5	100	84.767	ENSXMAG00000016369	rbm5	100	85.233	Xiphophorus_maculatus