EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000002270 (Gene tree)
Gene ID: 112163127
Gene Symbol: setd1ba
Alias: -
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 14407 bases
Position: chrNVQA01000031.1:13534876-13549282
Accession: 112163127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000001391	RRM_1	PF00076.22	2e-09	1	1
ENSOMEP00000001384	RRM_1	PF00076.22	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000014285	-	6879	-	ENSOMEP00000001384	1802 (aa)	-	-
ENSOMET00000014271	-	6878	XM_024299318	ENSOMEP00000001391	1761 (aa)	XP_024155086	UPI000CF82C2E

Gene Model

Click here to download ENSOMEG00000002270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000002270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000002270	setd1ba	50	66.557	ENSOMEG00000019732	setd1a	51	60.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000002270	setd1ba	52	81.013	ENSG00000139718	SETD1B	67	79.077	Homo_sapiens
ENSOMEG00000002270	setd1ba	97	77.647	ENSAOCG00000012148	setd1ba	99	78.327	Amphiprion_ocellaris
ENSOMEG00000002270	setd1ba	100	76.734	ENSAPEG00000010762	setd1ba	55	80.514	Amphiprion_percula
ENSOMEG00000002270	setd1ba	90	79.145	ENSATEG00000021563	setd1ba	99	79.756	Anabas_testudineus
ENSOMEG00000002270	setd1ba	92	56.559	ENSAPLG00000005217	SETD1B	87	55.695	Anas_platyrhynchos
ENSOMEG00000002270	setd1ba	52	80.380	ENSCJAG00000016930	SETD1B	68	78.462	Callithrix_jacchus
ENSOMEG00000002270	setd1ba	52	80.696	ENSCCAG00000031928	SETD1B	67	78.769	Cebus_capucinus
ENSOMEG00000002270	setd1ba	69	56.728	ENSCPBG00000026067	SETD1B	87	56.595	Chrysemys_picta_bellii
ENSOMEG00000002270	setd1ba	55	78.557	ENSCSEG00000001458	setd1ba	100	73.293	Cynoglossus_semilaevis
ENSOMEG00000002270	setd1ba	56	75.298	ENSCVAG00000022068	setd1ba	99	71.053	Cyprinodon_variegatus
ENSOMEG00000002270	setd1ba	53	63.469	ENSDARG00000060847	setd1ba	99	60.566	Danio_rerio
ENSOMEG00000002270	setd1ba	63	73.649	ENSELUG00000022712	-	63	69.782	Esox_lucius
ENSOMEG00000002270	setd1ba	53	81.115	ENSFALG00000009136	SETD1B	68	81.115	Ficedula_albicollis
ENSOMEG00000002270	setd1ba	53	77.812	ENSFHEG00000013126	setd1ba	56	76.983	Fundulus_heteroclitus
ENSOMEG00000002270	setd1ba	53	90.794	ENSGMOG00000009831	setd1ba	59	90.794	Gadus_morhua
ENSOMEG00000002270	setd1ba	69	58.642	ENSGALG00000004324	SETD1B	71	73.936	Gallus_gallus
ENSOMEG00000002270	setd1ba	89	79.661	ENSGAFG00000008712	setd1ba	88	79.661	Gambusia_affinis
ENSOMEG00000002270	setd1ba	100	72.423	ENSHCOG00000001951	setd1ba	99	72.099	Hippocampus_comes
ENSOMEG00000002270	setd1ba	54	59.899	ENSIPUG00000024741	setd1b	53	60.402	Ictalurus_punctatus
ENSOMEG00000002270	setd1ba	64	68.543	ENSSTOG00000005369	SETD1A	65	59.530	Ictidomys_tridecemlineatus
ENSOMEG00000002270	setd1ba	100	69.114	ENSLBEG00000020113	setd1ba	93	75.128	Labrus_bergylta
ENSOMEG00000002270	setd1ba	74	54.987	ENSLACG00000018379	SETD1B	85	60.064	Latimeria_chalumnae
ENSOMEG00000002270	setd1ba	59	68.896	ENSMLEG00000030176	SETD1A	60	68.404	Mandrillus_leucophaeus
ENSOMEG00000002270	setd1ba	100	76.439	ENSMAMG00000011027	setd1ba	100	76.656	Mastacembelus_armatus
ENSOMEG00000002270	setd1ba	83	57.580	ENSMGAG00000004421	SETD1B	84	57.822	Meleagris_gallopavo
ENSOMEG00000002270	setd1ba	54	80.879	ENSMMOG00000008190	setd1ba	55	80.060	Mola_mola
ENSOMEG00000002270	setd1ba	100	75.054	ENSMALG00000005362	setd1ba	100	74.892	Monopterus_albus
ENSOMEG00000002270	setd1ba	66	80.696	ENSNLEG00000001254	SETD1B	70	78.769	Nomascus_leucogenys
ENSOMEG00000002270	setd1ba	52	79.747	ENSODEG00000010155	SETD1B	66	77.370	Octodon_degus
ENSOMEG00000002270	setd1ba	100	87.340	ENSORLG00000008435	setd1ba	56	92.028	Oryzias_latipes
ENSOMEG00000002270	setd1ba	100	87.174	ENSORLG00020017079	setd1ba	55	91.818	Oryzias_latipes_hni
ENSOMEG00000002270	setd1ba	67	91.814	ENSORLG00015004156	setd1ba	97	91.983	Oryzias_latipes_hsok
ENSOMEG00000002270	setd1ba	52	78.788	ENSOGAG00000034809	SETD1B	66	78.788	Otolemur_garnettii
ENSOMEG00000002270	setd1ba	89	79.281	ENSPMGG00000011527	setd1ba	57	71.702	Periophthalmus_magnuspinnatus
ENSOMEG00000002270	setd1ba	58	78.730	ENSPCIG00000028605	SETD1B	87	55.178	Phascolarctos_cinereus
ENSOMEG00000002270	setd1ba	56	75.707	ENSPFOG00000019768	setd1ba	100	72.589	Poecilia_formosa
ENSOMEG00000002270	setd1ba	100	72.510	ENSPLAG00000023459	setd1ba	100	72.271	Poecilia_latipinna
ENSOMEG00000002270	setd1ba	100	73.355	ENSPREG00000011589	setd1ba	100	73.282	Poecilia_reticulata
ENSOMEG00000002270	setd1ba	56	63.275	ENSPNAG00000016011	setd1ba	99	58.500	Pygocentrus_nattereri
ENSOMEG00000002270	setd1ba	54	70.270	ENSRNOG00000001337	Setd1b	65	70.821	Rattus_norvegicus
ENSOMEG00000002270	setd1ba	52	49.901	ENSRBIG00000034516	SETD1B	66	78.769	Rhinopithecus_bieti
ENSOMEG00000002270	setd1ba	66	80.696	ENSSBOG00000033322	SETD1B	64	78.769	Saimiri_boliviensis_boliviensis
ENSOMEG00000002270	setd1ba	69	68.687	ENSSFOG00015004814	SETD1B	73	72.055	Scleropages_formosus
ENSOMEG00000002270	setd1ba	54	75.080	ENSSPUG00000011847	SETD1B	85	55.093	Sphenodon_punctatus
ENSOMEG00000002270	setd1ba	100	78.230	ENSSPAG00000015470	setd1ba	100	77.567	Stegastes_partitus
ENSOMEG00000002270	setd1ba	70	80.952	ENSSSCG00000009806	SETD1B	74	79.567	Sus_scrofa
ENSOMEG00000002270	setd1ba	68	58.269	ENSTGUG00000006093	-	68	81.424	Taeniopygia_guttata
ENSOMEG00000002270	setd1ba	92	76.543	ENSTRUG00000009533	setd1ba	88	80.993	Takifugu_rubripes
ENSOMEG00000002270	setd1ba	67	79.012	ENSUAMG00000008729	SETD1B	66	79.257	Ursus_americanus
ENSOMEG00000002270	setd1ba	61	48.914	ENSXETG00000003760	setd1b	85	58.240	Xenopus_tropicalis
ENSOMEG00000002270	setd1ba	56	76.855	ENSXCOG00000004451	setd1ba	99	71.111	Xiphophorus_couchianus