EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000002272 (Gene tree)
Gene ID
112144814
Gene Symbol
-
Alias
-
Full Name
RNA-binding protein Musashi homolog 1-like
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Minus strand
Length
33751 bases
Position
chrNVQA01000009.1:20858076-20891826
Accession
112144814
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000001349RRM_1PF00076.227.1e-3512
ENSOMEP00000001349RRM_1PF00076.227.1e-3522
ENSOMEP00000001356RRM_1PF00076.229.1e-3512
ENSOMEP00000001356RRM_1PF00076.229.1e-3522
ENSOMEP00000022627RRM_1PF00076.221e-3412
ENSOMEP00000022627RRM_1PF00076.221e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000014330-942-ENSOMEP00000001349313 (aa)--
ENSOMET00000014323-1828-ENSOMEP00000001356340 (aa)XP_024125386UPI000CF8166B
ENSOMET00000014279-3495XM_024269617ENSOMEP00000022627349 (aa)XP_024125385UPI000CF83DC0
Gene Model
Click here to download ENSOMEG00000002272's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000002272's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000002272-5537.500ENSOMEG00000021030-7037.989
ENSOMEG00000002272-5445.238ENSOMEG00000005936hnrnpaba8037.269
ENSOMEG00000002272-5343.750ENSOMEG00000002000-6536.283
ENSOMEG00000002272-6434.711ENSOMEG00000013637-5234.711
ENSOMEG00000002272-6537.607ENSOMEG00000002084-7237.607
ENSOMEG00000002272-5335.897ENSOMEG00000011670-9736.709
ENSOMEG00000002272-5337.662ENSOMEG00000009566-8538.217
ENSOMEG00000002272-10091.453ENSOMEG00000017536MSI110091.453
ENSOMEG00000002272-5547.904ENSOMEG00000018558hnrnpd5846.429
ENSOMEG00000002272-5137.647ENSOMEG00000011760rbm24a8638.372
ENSOMEG00000002272-7432.571ENSOMEG00000002509-9732.571
ENSOMEG00000002272-5444.643ENSOMEG00000023772hnrnpabb8637.917
ENSOMEG00000002272-5543.902ENSOMEG00000006903-6938.462
ENSOMEG00000002272-5537.288ENSOMEG00000023475-7537.430
ENSOMEG00000002272-5741.436ENSOMEG00000004838hnrnpa39635.632
ENSOMEG00000002272-10070.288ENSOMEG00000000146msi2a9869.659
ENSOMEG00000002272-5037.647ENSOMEG00000021525rbm24b8638.372
ENSOMEG00000002272-5442.105ENSOMEG00000015959-5642.373
ENSOMEG00000002272-5334.940ENSOMEG00000000997tardbp5534.940
ENSOMEG00000002272-5537.288ENSOMEG00000012368-6637.430
ENSOMEG00000002272-6230.841ENSOMEG00000020931tia17530.841
ENSOMEG00000002272-5738.710ENSOMEG00000006327-6638.710
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000002272-10084.615ENSG00000135097MSI19886.842Homo_sapiens
ENSOMEG00000002272-10091.453ENSAPOG00000023458-10091.453Acanthochromis_polyacanthus
ENSOMEG00000002272-10098.567ENSAPOG00000003191MSI110098.567Acanthochromis_polyacanthus
ENSOMEG00000002272-9492.188ENSAMEG00000013302MSI18392.308Ailuropoda_melanoleuca
ENSOMEG00000002272-9690.278ENSACIG00000017754-7296.535Amphilophus_citrinellus
ENSOMEG00000002272-10098.567ENSAOCG00000003804MSI110098.567Amphiprion_ocellaris
ENSOMEG00000002272-10085.623ENSAOCG00000009031-9585.942Amphiprion_ocellaris
ENSOMEG00000002272-10098.567ENSAPEG00000003245MSI110098.567Amphiprion_percula
ENSOMEG00000002272-10091.453ENSAPEG00000006857-8491.453Amphiprion_percula
ENSOMEG00000002272-9792.089ENSATEG00000017059MSI110087.115Anabas_testudineus
ENSOMEG00000002272-10090.368ENSATEG00000023779-10090.368Anabas_testudineus
ENSOMEG00000002272-10084.254ENSACAG00000002762MSI110085.083Anolis_carolinensis
ENSOMEG00000002272-8284.028ENSANAG00000027901-8886.466Aotus_nancymaae
ENSOMEG00000002272-10084.615ENSANAG00000027151MSI19886.842Aotus_nancymaae
ENSOMEG00000002272-10096.581ENSACLG00000011230MSI110096.581Astatotilapia_calliptera
ENSOMEG00000002272-10091.714ENSACLG00000000117-10092.661Astatotilapia_calliptera
ENSOMEG00000002272-9788.715ENSAMXG00000038960msi17688.715Astyanax_mexicanus
ENSOMEG00000002272-10084.615ENSBTAG00000009800MSI110086.804Bos_taurus
ENSOMEG00000002272-10084.615ENSCJAG00000008578MSI19886.842Callithrix_jacchus
ENSOMEG00000002272-10084.341ENSCAFG00000010283MSI19886.550Canis_familiaris
ENSOMEG00000002272-9786.174ENSCAFG00020020585MSI110086.174Canis_lupus_dingo
ENSOMEG00000002272-10083.198ENSCHIG00000024304MSI19885.303Capra_hircus
ENSOMEG00000002272-9786.239ENSTSYG00000033949MSI19586.239Carlito_syrichta
ENSOMEG00000002272-9786.081ENSCAPG00000003919MSI17886.081Cavia_aperea
ENSOMEG00000002272-9786.842ENSCPOG00000012361MSI110086.842Cavia_porcellus
ENSOMEG00000002272-10084.615ENSCCAG00000035567MSI19886.842Cebus_capucinus
ENSOMEG00000002272-10084.615ENSCATG00000030019MSI19886.842Cercocebus_atys
ENSOMEG00000002272-9786.842ENSCLAG00000011329MSI110086.842Chinchilla_lanigera
ENSOMEG00000002272-7192.825ENSCSAG00000002265MSI19683.513Chlorocebus_sabaeus
ENSOMEG00000002272-10087.252ENSCPBG00000011349MSI110087.252Chrysemys_picta_bellii
ENSOMEG00000002272-9786.280ENSCANG00000040651MSI110086.280Colobus_angolensis_palliatus
ENSOMEG00000002272-10084.615ENSCGRG00001018883Msi19886.842Cricetulus_griseus_chok1gshd
ENSOMEG00000002272-9786.322ENSCGRG00000002191Msi17286.322Cricetulus_griseus_crigri
ENSOMEG00000002272-10096.857ENSCSEG00000005834-10096.857Cynoglossus_semilaevis
ENSOMEG00000002272-10082.109ENSCSEG00000011032MSI110083.436Cynoglossus_semilaevis
ENSOMEG00000002272-10090.286ENSCSEG00000008352-10090.286Cynoglossus_semilaevis
ENSOMEG00000002272-5173.881ENSCVAG00000017430zgc:1107969473.881Cyprinodon_variegatus
ENSOMEG00000002272-10092.000ENSCVAG00000009100MSI110092.000Cyprinodon_variegatus
ENSOMEG00000002272-7880.093ENSCVAG00000017463-8980.093Cyprinodon_variegatus
ENSOMEG00000002272-8190.698ENSDARG00000102015CABZ01037298.18990.698Danio_rerio
ENSOMEG00000002272-10083.000ENSDARG00000010710msi110092.056Danio_rerio
ENSOMEG00000002272-9783.228ENSDNOG00000005713MSI19183.228Dasypus_novemcinctus
ENSOMEG00000002272-9785.629ENSDORG00000005610Msi19485.629Dipodomys_ordii
ENSOMEG00000002272-9783.841ENSETEG00000004756MSI110083.537Echinops_telfairi
ENSOMEG00000002272-10084.615ENSEASG00005004736MSI19886.842Equus_asinus_asinus
ENSOMEG00000002272-10084.615ENSECAG00000017526MSI19886.842Equus_caballus
ENSOMEG00000002272-10082.597ENSELUG00000023219MSI19583.056Esox_lucius
ENSOMEG00000002272-10084.688ENSELUG00000023280-10087.117Esox_lucius
ENSOMEG00000002272-10084.615ENSFCAG00000011007MSI19886.842Felis_catus
ENSOMEG00000002272-9789.333ENSFALG00000007574MSI110089.333Ficedula_albicollis
ENSOMEG00000002272-9785.976ENSFDAG00000019586MSI110085.976Fukomys_damarensis
ENSOMEG00000002272-10098.000ENSFHEG00000003560-10098.000Fundulus_heteroclitus
ENSOMEG00000002272-10091.738ENSFHEG00000022446MSI110091.738Fundulus_heteroclitus
ENSOMEG00000002272-10085.876ENSGMOG00000017838-10085.876Gadus_morhua
ENSOMEG00000002272-10090.544ENSGMOG00000001006MSI19990.258Gadus_morhua
ENSOMEG00000002272-9789.695ENSGALG00000007227MSI19875.827Gallus_gallus
ENSOMEG00000002272-10070.255ENSGAFG00000005860-10070.255Gambusia_affinis
ENSOMEG00000002272-9797.859ENSGAFG00000021522MSI19497.859Gambusia_affinis
ENSOMEG00000002272-10087.603ENSGACG00000008674-10087.603Gasterosteus_aculeatus
ENSOMEG00000002272-10089.744ENSGACG00000012679MSI110089.744Gasterosteus_aculeatus
ENSOMEG00000002272-10086.969ENSGAGG00000016037MSI110086.969Gopherus_agassizii
ENSOMEG00000002272-9785.987ENSGGOG00000010328MSI110085.987Gorilla_gorilla
ENSOMEG00000002272-10096.581ENSHBUG00000021921MSI110096.581Haplochromis_burtoni
ENSOMEG00000002272-10091.714ENSHBUG00000011841-10091.714Haplochromis_burtoni
ENSOMEG00000002272-10084.341ENSHGLG00000012782MSI19886.550Heterocephalus_glaber_female
ENSOMEG00000002272-9785.976ENSHGLG00100016848MSI110085.976Heterocephalus_glaber_male
ENSOMEG00000002272-9792.063ENSHCOG00000012067-10086.723Hippocampus_comes
ENSOMEG00000002272-9496.166ENSHCOG00000012019MSI19596.166Hippocampus_comes
ENSOMEG00000002272-10087.464ENSIPUG00000001976msi110087.464Ictalurus_punctatus
ENSOMEG00000002272-9786.174ENSSTOG00000009799MSI110086.174Ictidomys_tridecemlineatus
ENSOMEG00000002272-10074.143ENSJJAG00000010643-10072.222Jaculus_jaculus
ENSOMEG00000002272-10084.615ENSJJAG00000010463Msi19886.842Jaculus_jaculus
ENSOMEG00000002272-10092.332ENSKMAG00000019877-10093.252Kryptolebias_marmoratus
ENSOMEG00000002272-10091.977ENSKMAG00000011251MSI110091.977Kryptolebias_marmoratus
ENSOMEG00000002272-10091.738ENSLBEG00000008789MSI110091.738Labrus_bergylta
ENSOMEG00000002272-10097.429ENSLBEG00000001375-10097.429Labrus_bergylta
ENSOMEG00000002272-9783.626ENSLACG00000018287MSI110083.626Latimeria_chalumnae
ENSOMEG00000002272-5276.786ENSLOCG00000008618zgc:1107967176.786Lepisosteus_oculatus
ENSOMEG00000002272-9676.873ENSLAFG00000009412MSI110077.341Loxodonta_africana
ENSOMEG00000002272-9786.842ENSMFAG00000001798MSI110086.842Macaca_fascicularis
ENSOMEG00000002272-9786.842ENSMMUG00000031527MSI19786.842Macaca_mulatta
ENSOMEG00000002272-10084.615ENSMNEG00000040034MSI19886.842Macaca_nemestrina
ENSOMEG00000002272-9786.280ENSMLEG00000003921MSI110086.280Mandrillus_leucophaeus
ENSOMEG00000002272-10091.691ENSMAMG00000002279MSI110091.691Mastacembelus_armatus
ENSOMEG00000002272-10098.281ENSMAMG00000018426-10098.281Mastacembelus_armatus
ENSOMEG00000002272-10096.581ENSMZEG00005026892MSI110096.581Maylandia_zebra
ENSOMEG00000002272-10091.714ENSMZEG00005000340-10091.714Maylandia_zebra
ENSOMEG00000002272-7093.491ENSMGAG00000016518-10093.491Meleagris_gallopavo
ENSOMEG00000002272-7192.825ENSMAUG00000016820Msi110089.712Mesocricetus_auratus
ENSOMEG00000002272-10084.615ENSMICG00000033181MSI19886.842Microcebus_murinus
ENSOMEG00000002272-10084.341ENSMOCG00000002286Msi19886.550Microtus_ochrogaster
ENSOMEG00000002272-10085.304ENSMMOG00000010492MSI19685.304Mola_mola
ENSOMEG00000002272-10088.997ENSMMOG00000012265-9990.062Mola_mola
ENSOMEG00000002272-9658.735ENSMODG00000003189-10059.337Monodelphis_domestica
ENSOMEG00000002272-10091.714ENSMALG00000017889MSI110091.714Monopterus_albus
ENSOMEG00000002272-9797.239ENSMALG00000001426-10097.239Monopterus_albus
ENSOMEG00000002272-10084.066MGP_CAROLIEiJ_G0027626Msi19886.257Mus_caroli
ENSOMEG00000002272-9788.889ENSMUSG00000054256Msi19988.889Mus_musculus
ENSOMEG00000002272-10086.932MGP_PahariEiJ_G0024206Msi19889.394Mus_pahari
ENSOMEG00000002272-10084.066MGP_SPRETEiJ_G0028624Msi19886.257Mus_spretus
ENSOMEG00000002272-9786.174ENSMPUG00000003168MSI110086.174Mustela_putorius_furo
ENSOMEG00000002272-9777.381ENSMLUG00000010313MSI110077.381Myotis_lucifugus
ENSOMEG00000002272-9786.322ENSNGAG00000014508Msi19186.322Nannospalax_galili
ENSOMEG00000002272-10091.714ENSNBRG00000000841-10091.714Neolamprologus_brichardi
ENSOMEG00000002272-8987.705ENSNBRG00000018012MSI19987.705Neolamprologus_brichardi
ENSOMEG00000002272-9276.220ENSNLEG00000015636MSI110076.220Nomascus_leucogenys
ENSOMEG00000002272-9766.768ENSMEUG00000015759MSI110066.768Notamacropus_eugenii
ENSOMEG00000002272-9478.413ENSOPRG00000016879MSI110078.413Ochotona_princeps
ENSOMEG00000002272-9786.280ENSODEG00000006328MSI110086.280Octodon_degus
ENSOMEG00000002272-10091.714ENSONIG00000011182MSI110091.714Oreochromis_niloticus
ENSOMEG00000002272-10093.407ENSONIG00000019452-10093.407Oreochromis_niloticus
ENSOMEG00000002272-9786.495ENSOCUG00000027716MSI110086.495Oryctolagus_cuniculus
ENSOMEG00000002272-10091.168ENSORLG00000019978-10091.168Oryzias_latipes
ENSOMEG00000002272-10099.140ENSORLG00000029593MSI110099.140Oryzias_latipes
ENSOMEG00000002272-10099.140ENSORLG00020008266MSI19993.272Oryzias_latipes_hni
ENSOMEG00000002272-10091.168ENSORLG00020001208-7191.168Oryzias_latipes_hni
ENSOMEG00000002272-10099.140ENSORLG00015003916MSI110099.140Oryzias_latipes_hsok
ENSOMEG00000002272-10091.168ENSORLG00015013672-7686.325Oryzias_latipes_hsok
ENSOMEG00000002272-9885.714ENSOGAG00000003847MSI19885.714Otolemur_garnettii
ENSOMEG00000002272-9783.939ENSOARG00000012097MSI110083.939Ovis_aries
ENSOMEG00000002272-9786.280ENSPPAG00000043073MSI110086.280Pan_paniscus
ENSOMEG00000002272-10084.615ENSPPRG00000000370MSI19886.842Panthera_pardus
ENSOMEG00000002272-9786.174ENSPTIG00000008913MSI110086.174Panthera_tigris_altaica
ENSOMEG00000002272-10084.615ENSPTRG00000005531MSI19886.842Pan_troglodytes
ENSOMEG00000002272-10084.341ENSPANG00000006335MSI19886.550Papio_anubis
ENSOMEG00000002272-10093.429ENSPKIG00000016497MSI110093.429Paramormyrops_kingsleyae
ENSOMEG00000002272-10090.571ENSPKIG00000023575-10090.571Paramormyrops_kingsleyae
ENSOMEG00000002272-9787.156ENSPSIG00000011608-9387.156Pelodiscus_sinensis
ENSOMEG00000002272-8182.018ENSPSIG00000009621-10082.456Pelodiscus_sinensis
ENSOMEG00000002272-5484.615ENSPSIG00000016295-9584.615Pelodiscus_sinensis
ENSOMEG00000002272-9685.667ENSPMGG00000000514MSI19786.667Periophthalmus_magnuspinnatus
ENSOMEG00000002272-10075.380ENSPMGG00000007743-9871.470Periophthalmus_magnuspinnatus
ENSOMEG00000002272-9784.866ENSPEMG00000010491Msi19584.866Peromyscus_maniculatus_bairdii
ENSOMEG00000002272-10091.453ENSPFOG00000013113MSI110091.453Poecilia_formosa
ENSOMEG00000002272-10098.000ENSPFOG00000008319-8698.000Poecilia_formosa
ENSOMEG00000002272-10098.000ENSPLAG00000012431-9798.000Poecilia_latipinna
ENSOMEG00000002272-10091.453ENSPLAG00000014025-10091.453Poecilia_latipinna
ENSOMEG00000002272-10097.994ENSPMEG00000007025-9391.401Poecilia_mexicana
ENSOMEG00000002272-10091.453ENSPMEG00000012796MSI110091.453Poecilia_mexicana
ENSOMEG00000002272-8179.208ENSPREG00000014574-10079.638Poecilia_reticulata
ENSOMEG00000002272-9792.381ENSPREG00000021416-9887.464Poecilia_reticulata
ENSOMEG00000002272-10083.791ENSPPYG00000005027MSI19885.965Pongo_abelii
ENSOMEG00000002272-7989.340ENSPCAG00000002300MSI17289.340Procavia_capensis
ENSOMEG00000002272-10084.615ENSPCOG00000017341MSI19886.842Propithecus_coquereli
ENSOMEG00000002272-9770.122ENSPVAG00000002225MSI110070.122Pteropus_vampyrus
ENSOMEG00000002272-10091.714ENSPNYG00000002529-10091.714Pundamilia_nyererei
ENSOMEG00000002272-10096.581ENSPNYG00000004379MSI110096.581Pundamilia_nyererei
ENSOMEG00000002272-10088.034ENSPNAG00000019337msi110088.034Pygocentrus_nattereri
ENSOMEG00000002272-9785.852ENSRNOG00000001156Msi110085.852Rattus_norvegicus
ENSOMEG00000002272-9786.322ENSRBIG00000036889MSI110086.174Rhinopithecus_bieti
ENSOMEG00000002272-9786.061ENSRROG00000041076MSI19386.061Rhinopithecus_roxellana
ENSOMEG00000002272-9885.100ENSSBOG00000030259MSI19986.842Saimiri_boliviensis_boliviensis
ENSOMEG00000002272-9775.163ENSSHAG00000006834MSI110075.163Sarcophilus_harrisii
ENSOMEG00000002272-9792.192ENSSFOG00015005350MSI19692.447Scleropages_formosus
ENSOMEG00000002272-9695.122ENSSFOG00015014964-9892.625Scleropages_formosus
ENSOMEG00000002272-10085.382ENSSMAG00000018824MSI19786.392Scophthalmus_maximus
ENSOMEG00000002272-9798.084ENSSMAG00000009156-7298.020Scophthalmus_maximus
ENSOMEG00000002272-10091.453ENSSDUG00000001027MSI110091.453Seriola_dumerili
ENSOMEG00000002272-10097.714ENSSDUG00000022697-10097.714Seriola_dumerili
ENSOMEG00000002272-10086.164ENSSLDG00000018706-9986.792Seriola_lalandi_dorsalis
ENSOMEG00000002272-10091.453ENSSLDG00000016832MSI110091.453Seriola_lalandi_dorsalis
ENSOMEG00000002272-10086.969ENSSPUG00000015741MSI110089.124Sphenodon_punctatus
ENSOMEG00000002272-5194.017ENSSPAG00000015573zgc:1107968279.630Stegastes_partitus
ENSOMEG00000002272-9797.561ENSSPAG00000013098-10097.561Stegastes_partitus
ENSOMEG00000002272-8179.592ENSSPAG00000014085-10079.592Stegastes_partitus
ENSOMEG00000002272-10084.341ENSSSCG00000029365MSI110085.852Sus_scrofa
ENSOMEG00000002272-9787.059ENSTGUG00000009534MSI110087.059Taeniopygia_guttata
ENSOMEG00000002272-5080.808ENSTRUG00000021586-9980.808Takifugu_rubripes
ENSOMEG00000002272-8289.862ENSTRUG00000016249MSI110081.423Takifugu_rubripes
ENSOMEG00000002272-10089.701ENSTRUG00000015636-7989.701Takifugu_rubripes
ENSOMEG00000002272-10086.932ENSTNIG00000011469MSI110086.932Tetraodon_nigroviridis
ENSOMEG00000002272-10064.669ENSTNIG00000019814-9766.471Tetraodon_nigroviridis
ENSOMEG00000002272-10075.092ENSTBEG00000007182MSI110075.887Tupaia_belangeri
ENSOMEG00000002272-7989.098ENSTTRG00000005663MSI17889.098Tursiops_truncatus
ENSOMEG00000002272-7192.746ENSUAMG00000015514MSI19487.907Ursus_americanus
ENSOMEG00000002272-9782.736ENSUMAG00000006176MSI18882.736Ursus_maritimus
ENSOMEG00000002272-9786.322ENSVVUG00000020993MSI110085.586Vulpes_vulpes
ENSOMEG00000002272-10084.527ENSXETG00000012216msi110084.527Xenopus_tropicalis
ENSOMEG00000002272-10078.914ENSXCOG00000017605MSI18980.734Xiphophorus_couchianus
ENSOMEG00000002272-10092.000ENSXMAG00000027103MSI110079.832Xiphophorus_maculatus
ENSOMEG00000002272-10098.281ENSXMAG00000018237-10098.281Xiphophorus_maculatus

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