EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000002280 (Gene tree)
Gene ID: 112148035
Gene Symbol: gatc
Alias: -
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3145 bases
Position: chrNVQA01000012.1:14453943-14457087
Accession: 112148035
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000001397	Glu-tRNAGln	PF02686.15	3.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000014254	-	2270	-	ENSOMEP00000001397	187 (aa)	XP_024130584	UPI000CF7C1A2

Gene Model

Click here to download ENSOMEG00000002280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000002280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000002280	gatc	53	59.000	ENSG00000257218	GATC	100	65.957	Homo_sapiens
ENSOMEG00000002280	gatc	53	60.000	ENSAMEG00000013298	-	74	60.000	Ailuropoda_melanoleuca
ENSOMEG00000002280	gatc	51	81.250	ENSACIG00000016853	gatc	69	81.250	Amphilophus_citrinellus
ENSOMEG00000002280	gatc	66	84.677	ENSAOCG00000014641	gatc	99	84.677	Amphiprion_ocellaris
ENSOMEG00000002280	gatc	100	65.641	ENSAPEG00000023411	gatc	100	65.641	Amphiprion_percula
ENSOMEG00000002280	gatc	51	81.250	ENSATEG00000009237	gatc	79	81.250	Anabas_testudineus
ENSOMEG00000002280	gatc	56	65.385	ENSACAG00000002868	-	77	65.385	Anolis_carolinensis
ENSOMEG00000002280	gatc	53	61.000	ENSANAG00000034389	-	74	61.000	Aotus_nancymaae
ENSOMEG00000002280	gatc	100	65.152	ENSACLG00000026251	gatc	100	65.152	Astatotilapia_calliptera
ENSOMEG00000002280	gatc	70	74.809	ENSAMXG00000004252	gatc	59	74.074	Astyanax_mexicanus
ENSOMEG00000002280	gatc	53	57.000	ENSBTAG00000012791	GATC	74	57.000	Bos_taurus
ENSOMEG00000002280	gatc	63	41.026	WBGene00013433	Y66D12A.7	67	41.026	Caenorhabditis_elegans
ENSOMEG00000002280	gatc	53	61.000	ENSCJAG00000001183	-	55	61.000	Callithrix_jacchus
ENSOMEG00000002280	gatc	53	60.000	ENSCAFG00000010311	-	74	60.000	Canis_familiaris
ENSOMEG00000002280	gatc	53	60.000	ENSCAFG00020020606	-	74	60.000	Canis_lupus_dingo
ENSOMEG00000002280	gatc	57	54.717	ENSCHIG00000019423	-	78	54.717	Capra_hircus
ENSOMEG00000002280	gatc	53	59.000	ENSTSYG00000006845	-	74	59.000	Carlito_syrichta
ENSOMEG00000002280	gatc	53	61.000	ENSCCAG00000022235	-	74	61.000	Cebus_capucinus
ENSOMEG00000002280	gatc	53	59.000	ENSCATG00000038807	GATC	74	59.000	Cercocebus_atys
ENSOMEG00000002280	gatc	51	60.417	ENSCLAG00000011015	-	60	60.417	Chinchilla_lanigera
ENSOMEG00000002280	gatc	53	59.000	ENSCSAG00000002259	GATC	74	59.000	Chlorocebus_sabaeus
ENSOMEG00000002280	gatc	53	60.000	ENSCHOG00000009235	-	74	60.000	Choloepus_hoffmanni
ENSOMEG00000002280	gatc	68	60.938	ENSCPBG00000011342	-	68	60.938	Chrysemys_picta_bellii
ENSOMEG00000002280	gatc	54	58.416	ENSCANG00000031071	GATC	74	58.416	Colobus_angolensis_palliatus
ENSOMEG00000002280	gatc	51	57.895	ENSCGRG00001019220	-	61	57.895	Cricetulus_griseus_chok1gshd
ENSOMEG00000002280	gatc	51	57.895	ENSCGRG00000004184	-	61	57.895	Cricetulus_griseus_crigri
ENSOMEG00000002280	gatc	80	60.667	ENSCSEG00000016618	-	78	60.667	Cynoglossus_semilaevis
ENSOMEG00000002280	gatc	80	72.000	ENSCSEG00000007798	gatc	75	72.000	Cynoglossus_semilaevis
ENSOMEG00000002280	gatc	76	76.224	ENSCVAG00000004364	gatc	76	76.224	Cyprinodon_variegatus
ENSOMEG00000002280	gatc	72	72.593	ENSDARG00000056855	gatc	73	72.593	Danio_rerio
ENSOMEG00000002280	gatc	57	54.701	ENSDNOG00000012593	-	65	53.704	Dasypus_novemcinctus
ENSOMEG00000002280	gatc	50	44.681	FBgn0064115	GatC	64	44.681	Drosophila_melanogaster
ENSOMEG00000002280	gatc	53	52.525	ENSETEG00000002604	-	73	52.525	Echinops_telfairi
ENSOMEG00000002280	gatc	50	51.613	ENSEBUG00000008772	gatc	53	51.613	Eptatretus_burgeri
ENSOMEG00000002280	gatc	58	56.881	ENSECAG00000011118	-	74	61.000	Equus_caballus
ENSOMEG00000002280	gatc	53	54.545	ENSEEUG00000011638	-	73	54.545	Erinaceus_europaeus
ENSOMEG00000002280	gatc	64	68.293	ENSELUG00000012608	gatc	75	72.816	Esox_lucius
ENSOMEG00000002280	gatc	53	60.000	ENSFCAG00000038718	-	74	60.000	Felis_catus
ENSOMEG00000002280	gatc	76	51.007	ENSFALG00000007564	-	98	51.007	Ficedula_albicollis
ENSOMEG00000002280	gatc	57	58.491	ENSFDAG00000018720	-	77	58.491	Fukomys_damarensis
ENSOMEG00000002280	gatc	75	78.014	ENSFHEG00000014992	GATC	76	78.014	Fundulus_heteroclitus
ENSOMEG00000002280	gatc	76	66.434	ENSGMOG00000008742	gatc	88	66.434	Gadus_morhua
ENSOMEG00000002280	gatc	57	62.264	ENSGALG00000007195	-	80	61.607	Gallus_gallus
ENSOMEG00000002280	gatc	66	76.423	ENSGAFG00000012801	gatc	78	76.423	Gambusia_affinis
ENSOMEG00000002280	gatc	100	63.590	ENSGACG00000008973	gatc	100	63.590	Gasterosteus_aculeatus
ENSOMEG00000002280	gatc	68	62.500	ENSGAGG00000016018	-	70	62.500	Gopherus_agassizii
ENSOMEG00000002280	gatc	100	65.657	ENSHBUG00000006827	gatc	100	65.657	Haplochromis_burtoni
ENSOMEG00000002280	gatc	57	58.879	ENSHGLG00000011394	GATC	78	58.879	Heterocephalus_glaber_female
ENSOMEG00000002280	gatc	57	57.009	ENSHGLG00100018850	-	77	57.009	Heterocephalus_glaber_male
ENSOMEG00000002280	gatc	68	74.219	ENSHCOG00000009209	gatc	100	74.219	Hippocampus_comes
ENSOMEG00000002280	gatc	69	75.969	ENSIPUG00000023072	gatc	99	52.792	Ictalurus_punctatus
ENSOMEG00000002280	gatc	53	59.000	ENSSTOG00000025740	-	65	59.000	Ictidomys_tridecemlineatus
ENSOMEG00000002280	gatc	51	60.417	ENSJJAG00000000369	Gatc	61	60.417	Jaculus_jaculus
ENSOMEG00000002280	gatc	70	74.615	ENSKMAG00000016476	gatc	100	74.615	Kryptolebias_marmoratus
ENSOMEG00000002280	gatc	100	60.963	ENSLBEG00000007603	gatc	100	60.963	Labrus_bergylta
ENSOMEG00000002280	gatc	70	56.923	ENSLACG00000018239	-	67	56.923	Latimeria_chalumnae
ENSOMEG00000002280	gatc	88	59.394	ENSLOCG00000004056	gatc	85	59.394	Lepisosteus_oculatus
ENSOMEG00000002280	gatc	53	59.000	ENSMFAG00000034197	GATC	74	59.000	Macaca_fascicularis
ENSOMEG00000002280	gatc	53	59.000	ENSMMUG00000046665	GATC	74	59.000	Macaca_mulatta
ENSOMEG00000002280	gatc	53	59.000	ENSMNEG00000034653	GATC	74	59.000	Macaca_nemestrina
ENSOMEG00000002280	gatc	53	60.000	ENSMLEG00000039862	GATC	74	60.000	Mandrillus_leucophaeus
ENSOMEG00000002280	gatc	75	73.759	ENSMAMG00000015851	gatc	77	73.759	Mastacembelus_armatus
ENSOMEG00000002280	gatc	100	65.152	ENSMZEG00005016072	gatc	100	65.152	Maylandia_zebra
ENSOMEG00000002280	gatc	57	62.264	ENSMGAG00000008733	-	100	62.264	Meleagris_gallopavo
ENSOMEG00000002280	gatc	51	58.947	ENSMAUG00000012756	Gatc	61	58.947	Mesocricetus_auratus
ENSOMEG00000002280	gatc	53	59.000	ENSMICG00000008669	-	74	59.000	Microcebus_murinus
ENSOMEG00000002280	gatc	73	47.826	ENSMOCG00000005051	Gatc	87	47.826	Microtus_ochrogaster
ENSOMEG00000002280	gatc	59	77.477	ENSMMOG00000017695	gatc	94	73.451	Mola_mola
ENSOMEG00000002280	gatc	55	58.252	ENSMODG00000003152	-	78	58.252	Monodelphis_domestica
ENSOMEG00000002280	gatc	51	62.105	MGP_CAROLIEiJ_G0027623	Gatc	61	62.105	Mus_caroli
ENSOMEG00000002280	gatc	51	62.105	ENSMUSG00000029536	Gatc	61	62.105	Mus_musculus
ENSOMEG00000002280	gatc	51	61.458	MGP_PahariEiJ_G0024203	Gatc	62	61.458	Mus_pahari
ENSOMEG00000002280	gatc	51	61.053	MGP_SPRETEiJ_G0028621	Gatc	61	61.053	Mus_spretus
ENSOMEG00000002280	gatc	53	61.000	ENSMPUG00000003183	-	74	61.000	Mustela_putorius_furo
ENSOMEG00000002280	gatc	51	56.842	ENSMLUG00000010341	-	94	56.842	Myotis_lucifugus
ENSOMEG00000002280	gatc	50	60.215	ENSNGAG00000004734	Gatc	61	60.215	Nannospalax_galili
ENSOMEG00000002280	gatc	100	65.657	ENSNBRG00000007810	gatc	100	65.657	Neolamprologus_brichardi
ENSOMEG00000002280	gatc	59	56.364	ENSNLEG00000015651	GATC	81	56.364	Nomascus_leucogenys
ENSOMEG00000002280	gatc	56	58.654	ENSMEUG00000004064	-	84	58.654	Notamacropus_eugenii
ENSOMEG00000002280	gatc	54	58.416	ENSOPRG00000004226	-	74	58.416	Ochotona_princeps
ENSOMEG00000002280	gatc	76	72.917	ENSONIG00000013444	gatc	99	72.917	Oreochromis_niloticus
ENSOMEG00000002280	gatc	55	60.194	ENSOCUG00000009867	-	76	60.194	Oryctolagus_cuniculus
ENSOMEG00000002280	gatc	65	92.562	ENSORLG00000007156	gatc	100	92.562	Oryzias_latipes
ENSOMEG00000002280	gatc	100	82.199	ENSORLG00020014991	gatc	100	82.199	Oryzias_latipes_hni
ENSOMEG00000002280	gatc	100	80.628	ENSORLG00015003450	gatc	100	80.628	Oryzias_latipes_hsok
ENSOMEG00000002280	gatc	56	58.095	ENSOGAG00000003850	-	96	58.095	Otolemur_garnettii
ENSOMEG00000002280	gatc	59	53.043	ENSOARG00000012338	-	89	53.043	Ovis_aries
ENSOMEG00000002280	gatc	53	59.000	ENSPPAG00000029164	GATC	74	59.000	Pan_paniscus
ENSOMEG00000002280	gatc	53	60.000	ENSPPRG00000000929	-	74	60.000	Panthera_pardus
ENSOMEG00000002280	gatc	53	60.000	ENSPTIG00000009889	-	74	60.000	Panthera_tigris_altaica
ENSOMEG00000002280	gatc	53	59.000	ENSPTRG00000049887	GATC	74	59.000	Pan_troglodytes
ENSOMEG00000002280	gatc	53	58.000	ENSPANG00000033975	GATC	74	58.000	Papio_anubis
ENSOMEG00000002280	gatc	80	61.333	ENSPKIG00000024856	gatc	77	61.333	Paramormyrops_kingsleyae
ENSOMEG00000002280	gatc	59	64.865	ENSPSIG00000011112	-	95	64.865	Pelodiscus_sinensis
ENSOMEG00000002280	gatc	66	79.032	ENSPMGG00000018829	gatc	79	79.032	Periophthalmus_magnuspinnatus
ENSOMEG00000002280	gatc	50	61.702	ENSPEMG00000000665	Gatc	61	61.702	Peromyscus_maniculatus_bairdii
ENSOMEG00000002280	gatc	50	59.140	ENSPCIG00000025999	-	60	59.140	Phascolarctos_cinereus
ENSOMEG00000002280	gatc	76	77.465	ENSPFOG00000011603	gatc	77	77.465	Poecilia_formosa
ENSOMEG00000002280	gatc	76	76.761	ENSPLAG00000002471	gatc	77	76.761	Poecilia_latipinna
ENSOMEG00000002280	gatc	75	77.305	ENSPMEG00000020958	gatc	76	77.305	Poecilia_mexicana
ENSOMEG00000002280	gatc	59	82.883	ENSPREG00000022256	gatc	75	82.883	Poecilia_reticulata
ENSOMEG00000002280	gatc	57	58.879	ENSPPYG00000005030	GATC	78	58.879	Pongo_abelii
ENSOMEG00000002280	gatc	60	55.263	ENSPCAG00000013864	-	84	55.263	Procavia_capensis
ENSOMEG00000002280	gatc	60	48.214	ENSPCOG00000015558	-	87	48.214	Propithecus_coquereli
ENSOMEG00000002280	gatc	51	62.500	ENSPVAG00000002228	-	71	62.500	Pteropus_vampyrus
ENSOMEG00000002280	gatc	100	64.646	ENSPNYG00000016015	gatc	100	64.646	Pundamilia_nyererei
ENSOMEG00000002280	gatc	69	72.868	ENSPNAG00000001239	gatc	58	72.868	Pygocentrus_nattereri
ENSOMEG00000002280	gatc	50	60.215	ENSRNOG00000045621	Gatc	61	60.215	Rattus_norvegicus
ENSOMEG00000002280	gatc	51	63.158	ENSRNOG00000001161	Gatc	61	63.158	Rattus_norvegicus
ENSOMEG00000002280	gatc	53	59.000	ENSRBIG00000033363	GATC	74	59.000	Rhinopithecus_bieti
ENSOMEG00000002280	gatc	53	59.000	ENSRROG00000042802	GATC	74	59.000	Rhinopithecus_roxellana
ENSOMEG00000002280	gatc	59	55.455	ENSSBOG00000033750	-	81	55.455	Saimiri_boliviensis_boliviensis
ENSOMEG00000002280	gatc	57	57.547	ENSSHAG00000005745	-	100	57.547	Sarcophilus_harrisii
ENSOMEG00000002280	gatc	65	68.033	ENSSFOG00015002508	gatc	73	69.828	Scleropages_formosus
ENSOMEG00000002280	gatc	100	66.667	ENSSMAG00000014280	gatc	100	66.667	Scophthalmus_maximus
ENSOMEG00000002280	gatc	100	62.944	ENSSDUG00000012206	gatc	100	62.944	Seriola_dumerili
ENSOMEG00000002280	gatc	100	63.452	ENSSLDG00000025159	gatc	98	63.452	Seriola_lalandi_dorsalis
ENSOMEG00000002280	gatc	64	59.664	ENSSPUG00000015693	-	91	58.730	Sphenodon_punctatus
ENSOMEG00000002280	gatc	100	66.154	ENSSPAG00000011860	gatc	100	66.154	Stegastes_partitus
ENSOMEG00000002280	gatc	63	55.932	ENSSSCG00000032747	-	83	55.932	Sus_scrofa
ENSOMEG00000002280	gatc	57	64.486	ENSTGUG00000009561	-	99	64.486	Taeniopygia_guttata
ENSOMEG00000002280	gatc	73	73.723	ENSTRUG00000021596	gatc	96	60.204	Takifugu_rubripes
ENSOMEG00000002280	gatc	77	74.306	ENSTNIG00000015879	gatc	70	74.306	Tetraodon_nigroviridis
ENSOMEG00000002280	gatc	53	60.000	ENSTTRG00000000144	GATC	74	60.000	Tursiops_truncatus
ENSOMEG00000002280	gatc	53	61.000	ENSUAMG00000015523	-	74	61.000	Ursus_americanus
ENSOMEG00000002280	gatc	53	60.000	ENSVVUG00000021055	-	74	60.000	Vulpes_vulpes
ENSOMEG00000002280	gatc	73	67.883	ENSXCOG00000017087	gatc	100	67.883	Xiphophorus_couchianus
ENSOMEG00000002280	gatc	75	74.468	ENSXMAG00000018267	gatc	76	74.468	Xiphophorus_maculatus