EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000002388 (Gene tree)
Gene ID: 112145393
Gene Symbol: stau1
Alias: -
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 13530 bases
Position: chrNVQA01000009.1:8334321-8347850
Accession: 112145393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000001491	dsrm	PF00035.26	1.2e-45	1	4
ENSOMEP00000001491	dsrm	PF00035.26	1.2e-45	2	4
ENSOMEP00000001491	dsrm	PF00035.26	1.2e-45	3	4
ENSOMEP00000001491	dsrm	PF00035.26	1.2e-45	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000014087	-	4552	-	ENSOMEP00000001491	690 (aa)	XP_024126350	UPI000CF7F502

Gene Model

Click here to download ENSOMEG00000002388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000002388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000002388	stau1	84	49.521	ENSOMEG00000010542	stau2	99	45.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000002388	stau1	96	70.225	ENSG00000124214	STAU1	99	72.545	Homo_sapiens
ENSOMEG00000002388	stau1	99	88.406	ENSAPOG00000017260	stau1	99	88.406	Acanthochromis_polyacanthus
ENSOMEG00000002388	stau1	96	69.391	ENSAMEG00000013681	STAU1	95	69.391	Ailuropoda_melanoleuca
ENSOMEG00000002388	stau1	99	85.652	ENSACIG00000015918	stau1	99	86.667	Amphilophus_citrinellus
ENSOMEG00000002388	stau1	99	89.275	ENSAOCG00000012224	stau1	99	89.275	Amphiprion_ocellaris
ENSOMEG00000002388	stau1	99	89.565	ENSAPEG00000012308	stau1	99	89.565	Amphiprion_percula
ENSOMEG00000002388	stau1	99	88.473	ENSATEG00000024600	stau1	100	89.671	Anabas_testudineus
ENSOMEG00000002388	stau1	100	69.199	ENSAPLG00000010527	STAU1	100	69.199	Anas_platyrhynchos
ENSOMEG00000002388	stau1	100	70.339	ENSACAG00000015909	STAU1	99	70.339	Anolis_carolinensis
ENSOMEG00000002388	stau1	96	69.259	ENSANAG00000032714	STAU1	99	69.259	Aotus_nancymaae
ENSOMEG00000002388	stau1	99	86.599	ENSACLG00000012270	stau1	99	86.599	Astatotilapia_calliptera
ENSOMEG00000002388	stau1	89	76.636	ENSAMXG00000016812	stau1	99	77.196	Astyanax_mexicanus
ENSOMEG00000002388	stau1	96	69.663	ENSBTAG00000000241	STAU1	99	69.663	Bos_taurus
ENSOMEG00000002388	stau1	98	68.784	ENSCJAG00000016233	STAU1	99	70.037	Callithrix_jacchus
ENSOMEG00000002388	stau1	96	69.663	ENSCAFG00000011347	STAU1	99	68.778	Canis_familiaris
ENSOMEG00000002388	stau1	96	68.778	ENSCAFG00020017123	STAU1	99	71.829	Canis_lupus_dingo
ENSOMEG00000002388	stau1	96	69.288	ENSCHIG00000001799	-	99	69.288	Capra_hircus
ENSOMEG00000002388	stau1	96	69.450	ENSTSYG00000036179	-	99	69.450	Carlito_syrichta
ENSOMEG00000002388	stau1	72	71.142	ENSCAPG00000017041	STAU1	99	70.942	Cavia_aperea
ENSOMEG00000002388	stau1	71	69.076	ENSCPOG00000005566	STAU1	99	69.076	Cavia_porcellus
ENSOMEG00000002388	stau1	96	69.259	ENSCCAG00000034339	STAU1	99	69.259	Cebus_capucinus
ENSOMEG00000002388	stau1	96	73.922	ENSCATG00000028474	STAU1	99	73.922	Cercocebus_atys
ENSOMEG00000002388	stau1	72	59.400	ENSCLAG00000002784	-	99	59.400	Chinchilla_lanigera
ENSOMEG00000002388	stau1	71	72.289	ENSCLAG00000006516	-	99	72.289	Chinchilla_lanigera
ENSOMEG00000002388	stau1	72	72.345	ENSCSAG00000014986	STAU1	99	72.345	Chlorocebus_sabaeus
ENSOMEG00000002388	stau1	96	70.093	ENSCHOG00000001511	STAU1	99	70.093	Choloepus_hoffmanni
ENSOMEG00000002388	stau1	100	70.721	ENSCPBG00000026741	STAU1	100	70.721	Chrysemys_picta_bellii
ENSOMEG00000002388	stau1	96	70.412	ENSCANG00000039220	STAU1	99	70.412	Colobus_angolensis_palliatus
ENSOMEG00000002388	stau1	71	68.876	ENSCGRG00001013453	Stau1	99	68.876	Cricetulus_griseus_chok1gshd
ENSOMEG00000002388	stau1	71	68.876	ENSCGRG00000007216	Stau1	99	68.876	Cricetulus_griseus_crigri
ENSOMEG00000002388	stau1	99	75.740	ENSCSEG00000000792	stau1	99	76.728	Cynoglossus_semilaevis
ENSOMEG00000002388	stau1	96	77.715	ENSCVAG00000005906	stau1	100	78.652	Cyprinodon_variegatus
ENSOMEG00000002388	stau1	100	78.386	ENSDARG00000044182	stau1	100	78.386	Danio_rerio
ENSOMEG00000002388	stau1	96	70.356	ENSDNOG00000014933	STAU1	96	70.169	Dasypus_novemcinctus
ENSOMEG00000002388	stau1	71	71.020	ENSDORG00000030220	Stau1	99	71.020	Dipodomys_ordii
ENSOMEG00000002388	stau1	66	75.338	ENSETEG00000018235	STAU1	79	75.338	Echinops_telfairi
ENSOMEG00000002388	stau1	96	69.259	ENSEASG00005023343	STAU1	99	69.259	Equus_asinus_asinus
ENSOMEG00000002388	stau1	96	70.037	ENSECAG00000012894	STAU1	99	70.037	Equus_caballus
ENSOMEG00000002388	stau1	56	76.667	ENSEEUG00000014344	STAU1	68	76.667	Erinaceus_europaeus
ENSOMEG00000002388	stau1	99	79.772	ENSELUG00000002529	stau1	99	81.034	Esox_lucius
ENSOMEG00000002388	stau1	96	70.225	ENSFCAG00000001447	STAU1	99	70.225	Felis_catus
ENSOMEG00000002388	stau1	100	70.798	ENSFALG00000012940	STAU1	100	70.798	Ficedula_albicollis
ENSOMEG00000002388	stau1	71	55.061	ENSFDAG00000020837	-	98	54.251	Fukomys_damarensis
ENSOMEG00000002388	stau1	71	71.486	ENSFDAG00000014119	-	99	71.486	Fukomys_damarensis
ENSOMEG00000002388	stau1	100	84.914	ENSFHEG00000013517	stau1	100	84.914	Fundulus_heteroclitus
ENSOMEG00000002388	stau1	100	71.989	ENSGMOG00000016850	stau1	100	71.989	Gadus_morhua
ENSOMEG00000002388	stau1	100	71.368	ENSGALG00000004736	STAU1	100	71.368	Gallus_gallus
ENSOMEG00000002388	stau1	100	85.920	ENSGAFG00000010437	stau1	100	85.920	Gambusia_affinis
ENSOMEG00000002388	stau1	99	85.962	ENSGACG00000001352	stau1	99	85.962	Gasterosteus_aculeatus
ENSOMEG00000002388	stau1	100	71.469	ENSGAGG00000009825	STAU1	100	71.469	Gopherus_agassizii
ENSOMEG00000002388	stau1	96	64.880	ENSGGOG00000025351	STAU1	99	76.111	Gorilla_gorilla
ENSOMEG00000002388	stau1	99	86.455	ENSHBUG00000023668	stau1	99	86.455	Haplochromis_burtoni
ENSOMEG00000002388	stau1	71	72.967	ENSHGLG00000008730	STAU1	99	72.967	Heterocephalus_glaber_female
ENSOMEG00000002388	stau1	71	72.967	ENSHGLG00100000098	STAU1	99	72.967	Heterocephalus_glaber_male
ENSOMEG00000002388	stau1	99	81.727	ENSHCOG00000018461	stau1	99	81.727	Hippocampus_comes
ENSOMEG00000002388	stau1	99	75.652	ENSIPUG00000023725	stau1	99	75.652	Ictalurus_punctatus
ENSOMEG00000002388	stau1	71	71.951	ENSSTOG00000003634	STAU1	99	71.951	Ictidomys_tridecemlineatus
ENSOMEG00000002388	stau1	71	70.935	ENSJJAG00000020032	Stau1	99	70.935	Jaculus_jaculus
ENSOMEG00000002388	stau1	99	82.853	ENSKMAG00000007135	stau1	99	83.862	Kryptolebias_marmoratus
ENSOMEG00000002388	stau1	99	86.667	ENSLBEG00000020172	stau1	99	86.667	Labrus_bergylta
ENSOMEG00000002388	stau1	98	71.571	ENSLACG00000016157	STAU1	97	71.571	Latimeria_chalumnae
ENSOMEG00000002388	stau1	100	74.569	ENSLOCG00000003134	stau1	100	75.575	Lepisosteus_oculatus
ENSOMEG00000002388	stau1	74	72.461	ENSLAFG00000003238	STAU1	99	72.745	Loxodonta_africana
ENSOMEG00000002388	stau1	96	73.922	ENSMFAG00000040931	STAU1	98	75.188	Macaca_fascicularis
ENSOMEG00000002388	stau1	96	64.880	ENSMMUG00000002302	STAU1	98	75.188	Macaca_mulatta
ENSOMEG00000002388	stau1	96	72.979	ENSMNEG00000033821	STAU1	99	72.979	Macaca_nemestrina
ENSOMEG00000002388	stau1	96	70.037	ENSMLEG00000031383	STAU1	99	70.037	Mandrillus_leucophaeus
ENSOMEG00000002388	stau1	99	88.406	ENSMAMG00000017586	stau1	100	89.759	Mastacembelus_armatus
ENSOMEG00000002388	stau1	99	86.724	ENSMZEG00005015605	stau1	99	86.724	Maylandia_zebra
ENSOMEG00000002388	stau1	100	69.337	ENSMGAG00000004719	STAU1	100	69.337	Meleagris_gallopavo
ENSOMEG00000002388	stau1	71	68.876	ENSMAUG00000013846	Stau1	99	68.876	Mesocricetus_auratus
ENSOMEG00000002388	stau1	96	68.148	ENSMICG00000001995	STAU1	99	68.148	Microcebus_murinus
ENSOMEG00000002388	stau1	71	69.857	ENSMOCG00000018743	Stau1	99	69.277	Microtus_ochrogaster
ENSOMEG00000002388	stau1	99	84.949	ENSMMOG00000015455	stau1	99	85.484	Mola_mola
ENSOMEG00000002388	stau1	96	71.875	ENSMODG00000016276	STAU1	99	71.875	Monodelphis_domestica
ENSOMEG00000002388	stau1	99	87.826	ENSMALG00000000045	stau1	99	87.826	Monopterus_albus
ENSOMEG00000002388	stau1	71	69.512	MGP_CAROLIEiJ_G0024699	Stau1	99	69.512	Mus_caroli
ENSOMEG00000002388	stau1	71	69.309	ENSMUSG00000039536	Stau1	99	69.309	Mus_musculus
ENSOMEG00000002388	stau1	71	68.902	MGP_PahariEiJ_G0026141	Stau1	99	68.902	Mus_pahari
ENSOMEG00000002388	stau1	71	69.309	MGP_SPRETEiJ_G0025619	Stau1	99	69.309	Mus_spretus
ENSOMEG00000002388	stau1	96	69.436	ENSMPUG00000017581	STAU1	99	69.436	Mustela_putorius_furo
ENSOMEG00000002388	stau1	96	68.914	ENSMLUG00000008407	STAU1	97	68.914	Myotis_lucifugus
ENSOMEG00000002388	stau1	71	70.884	ENSNGAG00000007108	Stau1	99	70.884	Nannospalax_galili
ENSOMEG00000002388	stau1	99	86.455	ENSNBRG00000017596	stau1	99	86.455	Neolamprologus_brichardi
ENSOMEG00000002388	stau1	96	70.037	ENSNLEG00000006955	STAU1	99	71.485	Nomascus_leucogenys
ENSOMEG00000002388	stau1	66	76.906	ENSMEUG00000003263	STAU1	79	76.906	Notamacropus_eugenii
ENSOMEG00000002388	stau1	91	67.790	ENSOPRG00000014569	STAU1	92	67.790	Ochotona_princeps
ENSOMEG00000002388	stau1	72	72.946	ENSODEG00000006523	STAU1	99	72.946	Octodon_degus
ENSOMEG00000002388	stau1	99	84.034	ENSONIG00000004152	stau1	98	84.034	Oreochromis_niloticus
ENSOMEG00000002388	stau1	100	69.958	ENSOANG00000006394	STAU1	100	69.958	Ornithorhynchus_anatinus
ENSOMEG00000002388	stau1	96	69.533	ENSOCUG00000006214	STAU1	99	69.533	Oryctolagus_cuniculus
ENSOMEG00000002388	stau1	71	50.707	ENSOGAG00000028222	-	97	50.202	Otolemur_garnettii
ENSOMEG00000002388	stau1	96	70.968	ENSOGAG00000002127	STAU1	97	70.968	Otolemur_garnettii
ENSOMEG00000002388	stau1	96	69.288	ENSOARG00000012204	STAU1	99	68.843	Ovis_aries
ENSOMEG00000002388	stau1	96	64.880	ENSPPAG00000032023	STAU1	99	76.111	Pan_paniscus
ENSOMEG00000002388	stau1	96	70.225	ENSPPRG00000003436	STAU1	99	72.745	Panthera_pardus
ENSOMEG00000002388	stau1	96	70.225	ENSPTIG00000011768	STAU1	99	72.024	Panthera_tigris_altaica
ENSOMEG00000002388	stau1	96	64.880	ENSPTRG00000023130	STAU1	99	76.111	Pan_troglodytes
ENSOMEG00000002388	stau1	96	73.922	ENSPANG00000020560	STAU1	99	73.922	Papio_anubis
ENSOMEG00000002388	stau1	99	76.791	ENSPKIG00000024588	stau1	99	77.794	Paramormyrops_kingsleyae
ENSOMEG00000002388	stau1	100	71.612	ENSPSIG00000010731	STAU1	99	71.612	Pelodiscus_sinensis
ENSOMEG00000002388	stau1	100	81.089	ENSPMGG00000018553	stau1	100	80.946	Periophthalmus_magnuspinnatus
ENSOMEG00000002388	stau1	71	69.076	ENSPEMG00000022045	Stau1	99	69.076	Peromyscus_maniculatus_bairdii
ENSOMEG00000002388	stau1	97	70.925	ENSPCIG00000023269	STAU1	99	71.343	Phascolarctos_cinereus
ENSOMEG00000002388	stau1	100	85.079	ENSPFOG00000017253	stau1	100	85.079	Poecilia_formosa
ENSOMEG00000002388	stau1	58	85.323	ENSPLAG00000014829	stau1	96	80.928	Poecilia_latipinna
ENSOMEG00000002388	stau1	100	82.066	ENSPMEG00000007495	stau1	100	82.066	Poecilia_mexicana
ENSOMEG00000002388	stau1	100	85.509	ENSPREG00000003477	stau1	100	85.509	Poecilia_reticulata
ENSOMEG00000002388	stau1	96	69.963	ENSPPYG00000011111	STAU1	99	69.963	Pongo_abelii
ENSOMEG00000002388	stau1	73	64.427	ENSPCAG00000002459	STAU1	100	64.427	Procavia_capensis
ENSOMEG00000002388	stau1	96	69.101	ENSPCOG00000027746	STAU1	99	70.495	Propithecus_coquereli
ENSOMEG00000002388	stau1	66	75.839	ENSPVAG00000015019	STAU1	86	75.839	Pteropus_vampyrus
ENSOMEG00000002388	stau1	99	86.455	ENSPNYG00000014436	stau1	99	86.455	Pundamilia_nyererei
ENSOMEG00000002388	stau1	99	78.530	ENSPNAG00000011323	stau1	99	78.963	Pygocentrus_nattereri
ENSOMEG00000002388	stau1	71	68.474	ENSRNOG00000007781	Stau1	99	68.474	Rattus_norvegicus
ENSOMEG00000002388	stau1	72	71.912	ENSRBIG00000037345	STAU1	99	71.713	Rhinopithecus_bieti
ENSOMEG00000002388	stau1	96	72.979	ENSRROG00000039008	STAU1	99	72.979	Rhinopithecus_roxellana
ENSOMEG00000002388	stau1	96	69.259	ENSSBOG00000034448	STAU1	99	70.060	Saimiri_boliviensis_boliviensis
ENSOMEG00000002388	stau1	96	71.857	ENSSHAG00000009492	STAU1	99	71.726	Sarcophilus_harrisii
ENSOMEG00000002388	stau1	99	78.530	ENSSFOG00015021497	stau1	99	78.530	Scleropages_formosus
ENSOMEG00000002388	stau1	99	87.826	ENSSMAG00000017410	stau1	99	87.826	Scophthalmus_maximus
ENSOMEG00000002388	stau1	99	89.275	ENSSDUG00000019439	stau1	99	89.275	Seriola_dumerili
ENSOMEG00000002388	stau1	99	89.420	ENSSLDG00000025040	stau1	99	89.420	Seriola_lalandi_dorsalis
ENSOMEG00000002388	stau1	100	69.774	ENSSPUG00000017983	STAU1	99	70.987	Sphenodon_punctatus
ENSOMEG00000002388	stau1	99	89.565	ENSSPAG00000019275	stau1	99	89.565	Stegastes_partitus
ENSOMEG00000002388	stau1	96	69.850	ENSSSCG00000027444	STAU1	99	72.425	Sus_scrofa
ENSOMEG00000002388	stau1	100	68.871	ENSTGUG00000008784	STAU1	100	68.871	Taeniopygia_guttata
ENSOMEG00000002388	stau1	99	83.573	ENSTRUG00000005837	stau1	99	84.006	Takifugu_rubripes
ENSOMEG00000002388	stau1	97	83.383	ENSTNIG00000014732	stau1	99	83.383	Tetraodon_nigroviridis
ENSOMEG00000002388	stau1	92	62.722	ENSTBEG00000009404	STAU1	94	62.722	Tupaia_belangeri
ENSOMEG00000002388	stau1	66	72.331	ENSTTRG00000004285	STAU1	79	72.331	Tursiops_truncatus
ENSOMEG00000002388	stau1	72	71.429	ENSUAMG00000025449	STAU1	99	71.429	Ursus_americanus
ENSOMEG00000002388	stau1	55	69.531	ENSUMAG00000024475	STAU1	89	69.531	Ursus_maritimus
ENSOMEG00000002388	stau1	96	69.663	ENSVPAG00000001313	STAU1	99	69.663	Vicugna_pacos
ENSOMEG00000002388	stau1	96	68.925	ENSVVUG00000022325	STAU1	99	68.925	Vulpes_vulpes
ENSOMEG00000002388	stau1	97	69.822	ENSXETG00000001783	stau1	96	69.527	Xenopus_tropicalis
ENSOMEG00000002388	stau1	54	85.027	ENSXCOG00000008804	stau1	99	83.690	Xiphophorus_couchianus
ENSOMEG00000002388	stau1	100	85.345	ENSXMAG00000016175	stau1	100	85.345	Xiphophorus_maculatus