EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000002538 (Gene tree)
Gene ID: 112152893
Gene Symbol: pop4
Alias: -
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 3735 bases
Position: chrNVQA01000016.1:30133058-30136792
Accession: 112152893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000001628	UPF0086	PF01868.16	1.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000013855	-	1022	-	ENSOMEP00000001628	223 (aa)	XP_024138512	UPI000CF7F8A5

Gene Model

Click here to download ENSOMEG00000002538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000002538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000002538	pop4	91	60.784	ENSG00000105171	POP4	100	73.958	Homo_sapiens
ENSOMEG00000002538	pop4	93	52.857	ENSAMEG00000003172	-	94	52.857	Ailuropoda_melanoleuca
ENSOMEG00000002538	pop4	93	58.654	ENSAMEG00000018329	-	94	59.615	Ailuropoda_melanoleuca
ENSOMEG00000002538	pop4	99	73.756	ENSACIG00000008358	pop4	99	73.756	Amphilophus_citrinellus
ENSOMEG00000002538	pop4	91	77.723	ENSAOCG00000010116	pop4	98	77.723	Amphiprion_ocellaris
ENSOMEG00000002538	pop4	99	77.376	ENSAPEG00000002829	pop4	93	77.376	Amphiprion_percula
ENSOMEG00000002538	pop4	99	73.756	ENSATEG00000013028	pop4	99	73.756	Anabas_testudineus
ENSOMEG00000002538	pop4	91	60.294	ENSAPLG00000014051	POP4	98	60.294	Anas_platyrhynchos
ENSOMEG00000002538	pop4	91	61.275	ENSANAG00000020295	POP4	92	62.439	Aotus_nancymaae
ENSOMEG00000002538	pop4	100	75.336	ENSACLG00000000526	pop4	100	75.336	Astatotilapia_calliptera
ENSOMEG00000002538	pop4	96	63.551	ENSAMXG00000002899	pop4	96	63.551	Astyanax_mexicanus
ENSOMEG00000002538	pop4	93	61.058	ENSBTAG00000002223	POP4	94	62.019	Bos_taurus
ENSOMEG00000002538	pop4	67	30.872	WBGene00007603	C15C6.4	69	30.872	Caenorhabditis_elegans
ENSOMEG00000002538	pop4	91	60.784	ENSCJAG00000046750	POP4	95	66.860	Callithrix_jacchus
ENSOMEG00000002538	pop4	80	62.921	ENSCAFG00000007630	POP4	97	63.687	Canis_familiaris
ENSOMEG00000002538	pop4	93	59.615	ENSCHIG00000016743	POP4	90	62.312	Capra_hircus
ENSOMEG00000002538	pop4	92	59.223	ENSTSYG00000003488	POP4	93	60.870	Carlito_syrichta
ENSOMEG00000002538	pop4	93	43.269	ENSCAPG00000011105	POP4	93	43.269	Cavia_aperea
ENSOMEG00000002538	pop4	93	60.096	ENSCPOG00000002992	POP4	94	60.096	Cavia_porcellus
ENSOMEG00000002538	pop4	86	55.729	ENSCCAG00000034244	-	87	55.729	Cebus_capucinus
ENSOMEG00000002538	pop4	91	60.784	ENSCCAG00000020285	-	92	61.951	Cebus_capucinus
ENSOMEG00000002538	pop4	91	62.927	ENSCATG00000036022	POP4	100	75.000	Cercocebus_atys
ENSOMEG00000002538	pop4	89	62.814	ENSCLAG00000013162	POP4	90	63.317	Chinchilla_lanigera
ENSOMEG00000002538	pop4	91	61.275	ENSCSAG00000004868	POP4	93	62.439	Chlorocebus_sabaeus
ENSOMEG00000002538	pop4	93	42.308	ENSCHOG00000002071	POP4	91	43.719	Choloepus_hoffmanni
ENSOMEG00000002538	pop4	99	56.109	ENSCPBG00000016132	POP4	99	55.656	Chrysemys_picta_bellii
ENSOMEG00000002538	pop4	55	36.585	ENSCING00000023871	-	96	30.102	Ciona_intestinalis
ENSOMEG00000002538	pop4	91	60.784	ENSCANG00000005924	POP4	100	61.951	Colobus_angolensis_palliatus
ENSOMEG00000002538	pop4	89	61.500	ENSCGRG00001017185	Pop4	89	61.386	Cricetulus_griseus_chok1gshd
ENSOMEG00000002538	pop4	89	61.500	ENSCGRG00000008155	Pop4	89	61.386	Cricetulus_griseus_crigri
ENSOMEG00000002538	pop4	98	64.840	ENSCSEG00000002946	pop4	99	64.840	Cynoglossus_semilaevis
ENSOMEG00000002538	pop4	99	56.561	ENSCVAG00000018602	POP4	95	56.561	Cyprinodon_variegatus
ENSOMEG00000002538	pop4	99	59.729	ENSDARG00000101472	pop4	99	60.633	Danio_rerio
ENSOMEG00000002538	pop4	88	62.437	ENSDNOG00000047663	POP4	78	62.944	Dasypus_novemcinctus
ENSOMEG00000002538	pop4	69	57.792	ENSDORG00000008577	Pop4	88	60.390	Dipodomys_ordii
ENSOMEG00000002538	pop4	72	34.524	FBgn0035831	CG8038	82	34.524	Drosophila_melanogaster
ENSOMEG00000002538	pop4	93	50.481	ENSETEG00000003607	POP4	95	51.923	Echinops_telfairi
ENSOMEG00000002538	pop4	98	36.522	ENSEBUG00000004305	pop4	100	37.391	Eptatretus_burgeri
ENSOMEG00000002538	pop4	92	39.806	ENSEBUG00000008575	pop4	92	39.806	Eptatretus_burgeri
ENSOMEG00000002538	pop4	67	53.020	ENSEBUG00000010447	pop4	82	43.602	Eptatretus_burgeri
ENSOMEG00000002538	pop4	93	67.308	ENSECAG00000020206	POP4	77	67.308	Equus_caballus
ENSOMEG00000002538	pop4	90	43.500	ENSEEUG00000013109	POP4	99	44.000	Erinaceus_europaeus
ENSOMEG00000002538	pop4	99	61.991	ENSELUG00000019812	pop4	99	62.896	Esox_lucius
ENSOMEG00000002538	pop4	89	60.302	ENSFCAG00000001619	POP4	90	60.804	Felis_catus
ENSOMEG00000002538	pop4	92	59.709	ENSFALG00000000206	POP4	91	60.680	Ficedula_albicollis
ENSOMEG00000002538	pop4	89	61.307	ENSFDAG00000017859	POP4	90	61.809	Fukomys_damarensis
ENSOMEG00000002538	pop4	99	63.229	ENSFHEG00000012745	pop4	99	63.229	Fundulus_heteroclitus
ENSOMEG00000002538	pop4	89	65.327	ENSGMOG00000000335	pop4	98	65.327	Gadus_morhua
ENSOMEG00000002538	pop4	99	56.561	ENSGALG00000041972	POP4	92	57.014	Gallus_gallus
ENSOMEG00000002538	pop4	80	67.598	ENSGAFG00000003571	pop4	99	67.598	Gambusia_affinis
ENSOMEG00000002538	pop4	100	72.197	ENSGACG00000014510	pop4	100	75.000	Gasterosteus_aculeatus
ENSOMEG00000002538	pop4	99	56.561	ENSGAGG00000024544	POP4	79	56.561	Gopherus_agassizii
ENSOMEG00000002538	pop4	91	60.784	ENSGGOG00000038346	POP4	92	61.951	Gorilla_gorilla
ENSOMEG00000002538	pop4	100	75.785	ENSHBUG00000021821	pop4	100	75.785	Haplochromis_burtoni
ENSOMEG00000002538	pop4	89	61.307	ENSHGLG00000015798	POP4	90	61.809	Heterocephalus_glaber_female
ENSOMEG00000002538	pop4	89	61.307	ENSHGLG00100009737	POP4	90	61.809	Heterocephalus_glaber_male
ENSOMEG00000002538	pop4	100	68.161	ENSHCOG00000020937	pop4	100	68.161	Hippocampus_comes
ENSOMEG00000002538	pop4	99	61.086	ENSIPUG00000013652	pop4	99	61.086	Ictalurus_punctatus
ENSOMEG00000002538	pop4	93	60.577	ENSSTOG00000011016	POP4	94	61.058	Ictidomys_tridecemlineatus
ENSOMEG00000002538	pop4	88	61.929	ENSJJAG00000013376	Pop4	89	62.944	Jaculus_jaculus
ENSOMEG00000002538	pop4	100	74.888	ENSKMAG00000012250	pop4	100	74.888	Kryptolebias_marmoratus
ENSOMEG00000002538	pop4	100	66.816	ENSLBEG00000018846	-	100	66.816	Labrus_bergylta
ENSOMEG00000002538	pop4	100	66.816	ENSLBEG00000014139	pop4	100	66.816	Labrus_bergylta
ENSOMEG00000002538	pop4	98	55.251	ENSLACG00000008581	POP4	98	56.164	Latimeria_chalumnae
ENSOMEG00000002538	pop4	98	61.468	ENSLOCG00000005597	pop4	98	61.927	Lepisosteus_oculatus
ENSOMEG00000002538	pop4	93	60.096	ENSLAFG00000000084	POP4	94	60.096	Loxodonta_africana
ENSOMEG00000002538	pop4	91	61.275	ENSMFAG00000029606	POP4	92	62.439	Macaca_fascicularis
ENSOMEG00000002538	pop4	91	60.784	ENSMMUG00000017424	POP4	92	61.951	Macaca_mulatta
ENSOMEG00000002538	pop4	91	61.275	ENSMNEG00000031374	POP4	92	62.439	Macaca_nemestrina
ENSOMEG00000002538	pop4	91	61.275	ENSMLEG00000043454	POP4	92	62.927	Mandrillus_leucophaeus
ENSOMEG00000002538	pop4	99	74.661	ENSMAMG00000011716	pop4	99	74.661	Mastacembelus_armatus
ENSOMEG00000002538	pop4	100	75.336	ENSMZEG00005002360	pop4	100	75.336	Maylandia_zebra
ENSOMEG00000002538	pop4	96	57.009	ENSMGAG00000005337	POP4	95	57.944	Meleagris_gallopavo
ENSOMEG00000002538	pop4	89	62.000	ENSMAUG00000020110	Pop4	90	61.809	Mesocricetus_auratus
ENSOMEG00000002538	pop4	93	58.654	ENSMICG00000035730	POP4	92	60.096	Microcebus_murinus
ENSOMEG00000002538	pop4	99	69.683	ENSMMOG00000015321	pop4	99	70.136	Mola_mola
ENSOMEG00000002538	pop4	93	59.135	ENSMODG00000029406	POP4	89	60.096	Monodelphis_domestica
ENSOMEG00000002538	pop4	100	73.094	ENSMALG00000012571	pop4	100	73.991	Monopterus_albus
ENSOMEG00000002538	pop4	89	61.809	MGP_CAROLIEiJ_G0029600	Pop4	90	63.000	Mus_caroli
ENSOMEG00000002538	pop4	89	62.814	ENSMUSG00000030423	Pop4	90	62.814	Mus_musculus
ENSOMEG00000002538	pop4	89	61.809	MGP_SPRETEiJ_G0030699	Pop4	89	63.500	Mus_spretus
ENSOMEG00000002538	pop4	93	58.173	ENSMPUG00000008041	-	94	59.135	Mustela_putorius_furo
ENSOMEG00000002538	pop4	93	53.110	ENSMPUG00000008063	-	94	53.589	Mustela_putorius_furo
ENSOMEG00000002538	pop4	93	47.368	ENSMLUG00000010774	POP4	94	47.368	Myotis_lucifugus
ENSOMEG00000002538	pop4	56	68.000	ENSMEUG00000003636	-	100	68.000	Notamacropus_eugenii
ENSOMEG00000002538	pop4	89	61.809	ENSOPRG00000004736	POP4	99	63.317	Ochotona_princeps
ENSOMEG00000002538	pop4	89	61.809	ENSODEG00000013025	POP4	93	62.312	Octodon_degus
ENSOMEG00000002538	pop4	99	74.208	ENSONIG00000003458	pop4	97	74.208	Oreochromis_niloticus
ENSOMEG00000002538	pop4	89	61.809	ENSOCUG00000015974	POP4	90	62.312	Oryctolagus_cuniculus
ENSOMEG00000002538	pop4	99	87.330	ENSORLG00000020317	pop4	99	87.330	Oryzias_latipes
ENSOMEG00000002538	pop4	100	88.789	ENSORLG00015011624	pop4	100	88.789	Oryzias_latipes_hsok
ENSOMEG00000002538	pop4	93	60.096	ENSOGAG00000011168	POP4	94	62.679	Otolemur_garnettii
ENSOMEG00000002538	pop4	89	61.307	ENSOARG00000004041	POP4	89	62.312	Ovis_aries
ENSOMEG00000002538	pop4	91	60.784	ENSPPAG00000040372	POP4	92	61.951	Pan_paniscus
ENSOMEG00000002538	pop4	89	60.302	ENSPPRG00000010502	POP4	90	60.804	Panthera_pardus
ENSOMEG00000002538	pop4	89	60.302	ENSPTIG00000016598	POP4	90	60.804	Panthera_tigris_altaica
ENSOMEG00000002538	pop4	91	60.784	ENSPTRG00000010779	POP4	92	61.951	Pan_troglodytes
ENSOMEG00000002538	pop4	91	61.275	ENSPANG00000008546	POP4	92	62.439	Papio_anubis
ENSOMEG00000002538	pop4	90	61.194	ENSPKIG00000004468	pop4	88	61.194	Paramormyrops_kingsleyae
ENSOMEG00000002538	pop4	98	57.078	ENSPSIG00000015690	POP4	100	60.294	Pelodiscus_sinensis
ENSOMEG00000002538	pop4	91	63.902	ENSPMGG00000008608	pop4	98	64.878	Periophthalmus_magnuspinnatus
ENSOMEG00000002538	pop4	98	57.534	ENSPEMG00000014034	-	96	57.534	Peromyscus_maniculatus_bairdii
ENSOMEG00000002538	pop4	91	51.471	ENSPEMG00000019982	-	89	52.261	Peromyscus_maniculatus_bairdii
ENSOMEG00000002538	pop4	65	62.759	ENSPMAG00000006265	pop4	73	62.759	Petromyzon_marinus
ENSOMEG00000002538	pop4	99	57.919	ENSPCIG00000024738	POP4	95	57.919	Phascolarctos_cinereus
ENSOMEG00000002538	pop4	100	69.955	ENSPFOG00000000925	pop4	100	69.955	Poecilia_formosa
ENSOMEG00000002538	pop4	100	69.955	ENSPLAG00000003161	pop4	100	69.955	Poecilia_latipinna
ENSOMEG00000002538	pop4	100	69.955	ENSPMEG00000002475	pop4	100	69.955	Poecilia_mexicana
ENSOMEG00000002538	pop4	99	69.683	ENSPREG00000022403	pop4	93	69.683	Poecilia_reticulata
ENSOMEG00000002538	pop4	91	61.275	ENSPPYG00000009805	POP4	92	62.439	Pongo_abelii
ENSOMEG00000002538	pop4	91	61.576	ENSPCAG00000007737	POP4	91	62.069	Procavia_capensis
ENSOMEG00000002538	pop4	93	58.173	ENSPCOG00000018055	POP4	94	58.654	Propithecus_coquereli
ENSOMEG00000002538	pop4	93	60.000	ENSPVAG00000006069	POP4	94	60.000	Pteropus_vampyrus
ENSOMEG00000002538	pop4	100	75.336	ENSPNYG00000020038	pop4	100	75.336	Pundamilia_nyererei
ENSOMEG00000002538	pop4	99	61.991	ENSPNAG00000005591	pop4	99	61.991	Pygocentrus_nattereri
ENSOMEG00000002538	pop4	89	61.307	ENSRNOG00000027646	Pop4	90	62.500	Rattus_norvegicus
ENSOMEG00000002538	pop4	72	57.764	ENSRBIG00000044769	POP4	82	65.385	Rhinopithecus_bieti
ENSOMEG00000002538	pop4	91	61.275	ENSRROG00000028903	POP4	92	62.439	Rhinopithecus_roxellana
ENSOMEG00000002538	pop4	57	30.216	YBR257W	-	50	30.216	Saccharomyces_cerevisiae
ENSOMEG00000002538	pop4	91	62.439	ENSSBOG00000032445	POP4	92	62.439	Saimiri_boliviensis_boliviensis
ENSOMEG00000002538	pop4	93	59.135	ENSSHAG00000016888	POP4	94	59.135	Sarcophilus_harrisii
ENSOMEG00000002538	pop4	99	59.729	ENSSFOG00015014556	pop4	98	59.729	Scleropages_formosus
ENSOMEG00000002538	pop4	100	74.439	ENSSMAG00000016611	pop4	100	74.439	Scophthalmus_maximus
ENSOMEG00000002538	pop4	99	76.923	ENSSDUG00000019865	pop4	89	76.923	Seriola_dumerili
ENSOMEG00000002538	pop4	99	76.923	ENSSLDG00000001763	pop4	99	76.923	Seriola_lalandi_dorsalis
ENSOMEG00000002538	pop4	93	59.135	ENSSARG00000004748	POP4	95	60.096	Sorex_araneus
ENSOMEG00000002538	pop4	99	77.828	ENSSPAG00000014364	pop4	99	77.828	Stegastes_partitus
ENSOMEG00000002538	pop4	93	60.096	ENSSSCG00000002854	POP4	94	60.577	Sus_scrofa
ENSOMEG00000002538	pop4	91	59.901	ENSTGUG00000008953	POP4	100	60.891	Taeniopygia_guttata
ENSOMEG00000002538	pop4	91	66.667	ENSTNIG00000006401	pop4	100	66.667	Tetraodon_nigroviridis
ENSOMEG00000002538	pop4	89	63.131	ENSTBEG00000002194	POP4	89	64.322	Tupaia_belangeri
ENSOMEG00000002538	pop4	89	61.307	ENSTTRG00000005882	POP4	90	61.809	Tursiops_truncatus
ENSOMEG00000002538	pop4	93	57.692	ENSUAMG00000003049	-	94	58.173	Ursus_americanus
ENSOMEG00000002538	pop4	93	57.692	ENSUMAG00000007522	-	94	58.173	Ursus_maritimus
ENSOMEG00000002538	pop4	89	59.799	ENSVVUG00000016876	-	69	60.804	Vulpes_vulpes
ENSOMEG00000002538	pop4	92	59.223	ENSXETG00000017598	pop4	93	59.223	Xenopus_tropicalis
ENSOMEG00000002538	pop4	99	68.919	ENSXCOG00000017695	pop4	93	68.919	Xiphophorus_couchianus
ENSOMEG00000002538	pop4	99	68.919	ENSXMAG00000013862	pop4	93	68.919	Xiphophorus_maculatus