EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000002609 (Gene tree)
Gene ID: 112162070
Gene Symbol: rrp12
Alias: -
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 12548 bases
Position: chrNVQA01000028.1:22048089-22060636
Accession: ZDB-GENE-050706-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000022841	NUC173	PF08161.12	2.1e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000013748	-	4431	-	ENSOMEP00000022841	1273 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000002609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000002609's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000002609	rrp12	99	64.720	ENSG00000052749	RRP12	100	78.125	Homo_sapiens
ENSOMEG00000002609	rrp12	99	85.329	ENSAPOG00000013355	rrp12	97	85.329	Acanthochromis_polyacanthus
ENSOMEG00000002609	rrp12	99	64.224	ENSAMEG00000000134	RRP12	97	64.145	Ailuropoda_melanoleuca
ENSOMEG00000002609	rrp12	99	86.783	ENSACIG00000022673	rrp12	97	86.783	Amphilophus_citrinellus
ENSOMEG00000002609	rrp12	99	88.226	ENSAOCG00000016149	rrp12	97	88.305	Amphiprion_ocellaris
ENSOMEG00000002609	rrp12	99	86.519	ENSAPEG00000016023	rrp12	97	86.598	Amphiprion_percula
ENSOMEG00000002609	rrp12	99	86.736	ENSATEG00000022627	rrp12	97	86.736	Anabas_testudineus
ENSOMEG00000002609	rrp12	95	60.131	ENSAPLG00000014387	RRP12	97	60.490	Anas_platyrhynchos
ENSOMEG00000002609	rrp12	99	60.142	ENSACAG00000002175	RRP12	97	60.000	Anolis_carolinensis
ENSOMEG00000002609	rrp12	91	74.342	ENSANAG00000037485	RRP12	97	74.342	Aotus_nancymaae
ENSOMEG00000002609	rrp12	99	85.998	ENSACLG00000007354	rrp12	97	85.998	Astatotilapia_calliptera
ENSOMEG00000002609	rrp12	99	75.179	ENSAMXG00000012852	rrp12	98	75.259	Astyanax_mexicanus
ENSOMEG00000002609	rrp12	99	63.299	ENSBTAG00000002191	RRP12	97	63.299	Bos_taurus
ENSOMEG00000002609	rrp12	83	62.465	ENSCJAG00000016549	-	97	62.372	Callithrix_jacchus
ENSOMEG00000002609	rrp12	99	64.460	ENSCAFG00000009043	RRP12	97	64.145	Canis_familiaris
ENSOMEG00000002609	rrp12	99	64.460	ENSCAFG00020005991	RRP12	97	64.145	Canis_lupus_dingo
ENSOMEG00000002609	rrp12	97	61.496	ENSCHIG00000011876	RRP12	96	61.694	Capra_hircus
ENSOMEG00000002609	rrp12	51	55.689	ENSTSYG00000030210	-	95	56.456	Carlito_syrichta
ENSOMEG00000002609	rrp12	95	57.506	ENSCAPG00000008991	RRP12	95	57.436	Cavia_aperea
ENSOMEG00000002609	rrp12	99	63.133	ENSCPOG00000004215	RRP12	97	62.995	Cavia_porcellus
ENSOMEG00000002609	rrp12	79	67.540	ENSCCAG00000024088	RRP12	97	69.895	Cebus_capucinus
ENSOMEG00000002609	rrp12	68	58.636	ENSCCAG00000033123	-	80	58.390	Cebus_capucinus
ENSOMEG00000002609	rrp12	99	60.221	ENSCATG00000045310	RRP12	97	60.410	Cercocebus_atys
ENSOMEG00000002609	rrp12	99	63.241	ENSCLAG00000003753	RRP12	97	62.816	Chinchilla_lanigera
ENSOMEG00000002609	rrp12	87	63.229	ENSCSAG00000005877	RRP12	97	63.498	Chlorocebus_sabaeus
ENSOMEG00000002609	rrp12	52	71.761	ENSCHOG00000003095	-	53	71.714	Choloepus_hoffmanni
ENSOMEG00000002609	rrp12	92	64.268	ENSCPBG00000011935	RRP12	95	64.243	Chrysemys_picta_bellii
ENSOMEG00000002609	rrp12	62	39.975	ENSCSAVG00000006059	-	96	39.852	Ciona_savignyi
ENSOMEG00000002609	rrp12	91	74.342	ENSCANG00000031653	RRP12	97	74.342	Colobus_angolensis_palliatus
ENSOMEG00000002609	rrp12	89	63.573	ENSCGRG00001004338	Rrp12	97	64.011	Cricetulus_griseus_chok1gshd
ENSOMEG00000002609	rrp12	99	63.162	ENSCGRG00000011965	Rrp12	97	63.557	Cricetulus_griseus_crigri
ENSOMEG00000002609	rrp12	99	83.241	ENSCSEG00000007799	rrp12	98	83.479	Cynoglossus_semilaevis
ENSOMEG00000002609	rrp12	99	86.158	ENSCVAG00000003418	rrp12	97	86.476	Cyprinodon_variegatus
ENSOMEG00000002609	rrp12	99	73.175	ENSDARG00000022410	rrp12	98	73.349	Danio_rerio
ENSOMEG00000002609	rrp12	99	63.378	ENSDNOG00000005120	RRP12	97	63.091	Dasypus_novemcinctus
ENSOMEG00000002609	rrp12	99	63.801	ENSDORG00000009199	Rrp12	97	64.353	Dipodomys_ordii
ENSOMEG00000002609	rrp12	99	30.535	FBgn0030504	CG2691	98	30.558	Drosophila_melanogaster
ENSOMEG00000002609	rrp12	90	70.000	ENSETEG00000002455	RRP12	90	70.000	Echinops_telfairi
ENSOMEG00000002609	rrp12	89	53.750	ENSEBUG00000006555	rrp12	93	53.086	Eptatretus_burgeri
ENSOMEG00000002609	rrp12	99	64.297	ENSEASG00005008693	RRP12	97	64.534	Equus_asinus_asinus
ENSOMEG00000002609	rrp12	96	61.874	ENSECAG00000010892	RRP12	97	64.394	Equus_caballus
ENSOMEG00000002609	rrp12	64	59.412	ENSEEUG00000005447	-	63	59.412	Erinaceus_europaeus
ENSOMEG00000002609	rrp12	99	77.601	ENSELUG00000010510	rrp12	100	77.307	Esox_lucius
ENSOMEG00000002609	rrp12	91	74.342	ENSFCAG00000028639	RRP12	97	74.342	Felis_catus
ENSOMEG00000002609	rrp12	92	63.997	ENSFALG00000008458	RRP12	97	63.629	Ficedula_albicollis
ENSOMEG00000002609	rrp12	99	63.478	ENSFDAG00000019108	RRP12	93	63.183	Fukomys_damarensis
ENSOMEG00000002609	rrp12	99	77.883	ENSFHEG00000004148	rrp12	98	77.409	Fundulus_heteroclitus
ENSOMEG00000002609	rrp12	98	71.040	ENSGMOG00000004188	rrp12	96	70.952	Gadus_morhua
ENSOMEG00000002609	rrp12	99	64.082	ENSGALG00000041331	RRP12	96	64.237	Gallus_gallus
ENSOMEG00000002609	rrp12	99	86.169	ENSGAFG00000009038	rrp12	97	86.169	Gambusia_affinis
ENSOMEG00000002609	rrp12	99	82.896	ENSGACG00000007175	rrp12	97	82.896	Gasterosteus_aculeatus
ENSOMEG00000002609	rrp12	68	67.089	ENSGAGG00000019169	RRP12	99	64.452	Gopherus_agassizii
ENSOMEG00000002609	rrp12	99	64.957	ENSGGOG00000014850	RRP12	97	64.799	Gorilla_gorilla
ENSOMEG00000002609	rrp12	99	86.237	ENSHBUG00000023527	rrp12	97	86.237	Haplochromis_burtoni
ENSOMEG00000002609	rrp12	99	63.528	ENSHGLG00000016772	RRP12	97	63.500	Heterocephalus_glaber_female
ENSOMEG00000002609	rrp12	99	63.528	ENSHGLG00100015110	RRP12	97	63.500	Heterocephalus_glaber_male
ENSOMEG00000002609	rrp12	99	80.319	ENSHCOG00000019519	rrp12	97	80.319	Hippocampus_comes
ENSOMEG00000002609	rrp12	99	72.893	ENSIPUG00000000311	RRP12	97	73.529	Ictalurus_punctatus
ENSOMEG00000002609	rrp12	99	64.478	ENSSTOG00000006515	RRP12	97	64.371	Ictidomys_tridecemlineatus
ENSOMEG00000002609	rrp12	95	63.331	ENSJJAG00000000110	Rrp12	96	62.561	Jaculus_jaculus
ENSOMEG00000002609	rrp12	99	85.998	ENSKMAG00000020621	rrp12	97	86.396	Kryptolebias_marmoratus
ENSOMEG00000002609	rrp12	99	81.688	ENSLBEG00000015335	rrp12	97	81.688	Labrus_bergylta
ENSOMEG00000002609	rrp12	73	64.419	ENSLACG00000016633	RRP12	80	64.419	Latimeria_chalumnae
ENSOMEG00000002609	rrp12	99	69.890	ENSLOCG00000003846	rrp12	97	69.890	Lepisosteus_oculatus
ENSOMEG00000002609	rrp12	99	64.094	ENSLAFG00000015965	RRP12	97	63.751	Loxodonta_africana
ENSOMEG00000002609	rrp12	91	73.684	ENSMFAG00000041558	RRP12	97	73.684	Macaca_fascicularis
ENSOMEG00000002609	rrp12	91	73.684	ENSMMUG00000019634	RRP12	97	73.684	Macaca_mulatta
ENSOMEG00000002609	rrp12	91	73.684	ENSMNEG00000036759	RRP12	97	73.684	Macaca_nemestrina
ENSOMEG00000002609	rrp12	91	74.342	ENSMLEG00000041317	RRP12	97	74.342	Mandrillus_leucophaeus
ENSOMEG00000002609	rrp12	99	83.758	ENSMAMG00000002964	rrp12	97	86.175	Mastacembelus_armatus
ENSOMEG00000002609	rrp12	99	86.078	ENSMZEG00005003241	rrp12	97	86.078	Maylandia_zebra
ENSOMEG00000002609	rrp12	99	62.461	ENSMGAG00000009829	RRP12	98	62.648	Meleagris_gallopavo
ENSOMEG00000002609	rrp12	94	64.103	ENSMAUG00000020743	Rrp12	95	64.185	Mesocricetus_auratus
ENSOMEG00000002609	rrp12	99	64.534	ENSMICG00000007624	RRP12	97	75.817	Microcebus_murinus
ENSOMEG00000002609	rrp12	99	64.692	ENSMOCG00000006753	Rrp12	97	64.455	Microtus_ochrogaster
ENSOMEG00000002609	rrp12	99	82.180	ENSMMOG00000010708	rrp12	97	82.180	Mola_mola
ENSOMEG00000002609	rrp12	99	64.212	ENSMODG00000004315	RRP12	97	64.105	Monodelphis_domestica
ENSOMEG00000002609	rrp12	99	79.428	ENSMALG00000016560	rrp12	99	84.987	Monopterus_albus
ENSOMEG00000002609	rrp12	99	64.476	MGP_CAROLIEiJ_G0022957	Rrp12	97	64.163	Mus_caroli
ENSOMEG00000002609	rrp12	99	65.087	ENSMUSG00000035049	Rrp12	97	64.692	Mus_musculus
ENSOMEG00000002609	rrp12	99	65.166	MGP_PahariEiJ_G0014447	Rrp12	97	64.771	Mus_pahari
ENSOMEG00000002609	rrp12	99	65.324	MGP_SPRETEiJ_G0023878	Rrp12	97	64.929	Mus_spretus
ENSOMEG00000002609	rrp12	99	63.931	ENSMPUG00000017046	RRP12	97	63.931	Mustela_putorius_furo
ENSOMEG00000002609	rrp12	99	64.409	ENSMLUG00000017160	RRP12	97	64.567	Myotis_lucifugus
ENSOMEG00000002609	rrp12	99	64.585	ENSNGAG00000024144	Rrp12	97	64.269	Nannospalax_galili
ENSOMEG00000002609	rrp12	99	84.487	ENSNBRG00000009987	rrp12	97	84.407	Neolamprologus_brichardi
ENSOMEG00000002609	rrp12	99	56.580	ENSNLEG00000013762	RRP12	97	74.342	Nomascus_leucogenys
ENSOMEG00000002609	rrp12	99	59.033	ENSMEUG00000003185	RRP12	97	59.015	Notamacropus_eugenii
ENSOMEG00000002609	rrp12	92	67.554	ENSOPRG00000005001	RRP12	91	67.554	Ochotona_princeps
ENSOMEG00000002609	rrp12	99	62.719	ENSODEG00000016439	RRP12	97	62.291	Octodon_degus
ENSOMEG00000002609	rrp12	99	86.635	ENSONIG00000009528	rrp12	97	86.714	Oreochromis_niloticus
ENSOMEG00000002609	rrp12	99	60.331	ENSOANG00000006560	RRP12	97	60.331	Ornithorhynchus_anatinus
ENSOMEG00000002609	rrp12	99	63.766	ENSOCUG00000005662	RRP12	97	63.816	Oryctolagus_cuniculus
ENSOMEG00000002609	rrp12	99	95.458	ENSORLG00000008688	rrp12	99	95.420	Oryzias_latipes
ENSOMEG00000002609	rrp12	99	95.462	ENSORLG00020002355	rrp12	100	95.462	Oryzias_latipes_hni
ENSOMEG00000002609	rrp12	99	95.299	ENSORLG00015006709	rrp12	97	95.299	Oryzias_latipes_hsok
ENSOMEG00000002609	rrp12	99	63.436	ENSOGAG00000001626	RRP12	97	63.121	Otolemur_garnettii
ENSOMEG00000002609	rrp12	99	62.175	ENSOARG00000009681	RRP12	97	62.175	Ovis_aries
ENSOMEG00000002609	rrp12	99	62.904	ENSPPAG00000043885	RRP12	98	62.657	Pan_paniscus
ENSOMEG00000002609	rrp12	91	74.342	ENSPPRG00000002029	RRP12	97	74.342	Panthera_pardus
ENSOMEG00000002609	rrp12	91	74.342	ENSPTIG00000004428	RRP12	97	74.342	Panthera_tigris_altaica
ENSOMEG00000002609	rrp12	99	62.983	ENSPTRG00000002806	RRP12	98	62.736	Pan_troglodytes
ENSOMEG00000002609	rrp12	91	74.342	ENSPANG00000021360	RRP12	97	74.342	Papio_anubis
ENSOMEG00000002609	rrp12	99	73.872	ENSPKIG00000016516	rrp12	97	73.872	Paramormyrops_kingsleyae
ENSOMEG00000002609	rrp12	99	80.016	ENSPMGG00000020217	rrp12	98	79.937	Periophthalmus_magnuspinnatus
ENSOMEG00000002609	rrp12	99	65.036	ENSPEMG00000008437	Rrp12	97	64.799	Peromyscus_maniculatus_bairdii
ENSOMEG00000002609	rrp12	86	52.614	ENSPMAG00000007493	rrp12	97	46.846	Petromyzon_marinus
ENSOMEG00000002609	rrp12	99	63.946	ENSPCIG00000002157	RRP12	98	63.701	Phascolarctos_cinereus
ENSOMEG00000002609	rrp12	99	86.248	ENSPFOG00000014975	rrp12	97	86.248	Poecilia_formosa
ENSOMEG00000002609	rrp12	99	86.010	ENSPLAG00000009840	rrp12	97	86.010	Poecilia_latipinna
ENSOMEG00000002609	rrp12	99	86.248	ENSPMEG00000021871	rrp12	97	86.248	Poecilia_mexicana
ENSOMEG00000002609	rrp12	99	82.756	ENSPREG00000020950	rrp12	97	82.756	Poecilia_reticulata
ENSOMEG00000002609	rrp12	99	63.457	ENSPPYG00000002528	RRP12	97	63.299	Pongo_abelii
ENSOMEG00000002609	rrp12	93	76.271	ENSPCAG00000008967	RRP12	92	76.271	Procavia_capensis
ENSOMEG00000002609	rrp12	91	75.658	ENSPCOG00000014009	RRP12	97	75.658	Propithecus_coquereli
ENSOMEG00000002609	rrp12	99	61.611	ENSPVAG00000003370	RRP12	98	61.453	Pteropus_vampyrus
ENSOMEG00000002609	rrp12	99	86.555	ENSPNYG00000009451	rrp12	97	86.555	Pundamilia_nyererei
ENSOMEG00000002609	rrp12	99	75.299	ENSPNAG00000007658	rrp12	97	75.458	Pygocentrus_nattereri
ENSOMEG00000002609	rrp12	99	64.111	ENSRNOG00000048495	Rrp12	97	64.060	Rattus_norvegicus
ENSOMEG00000002609	rrp12	91	74.342	ENSRBIG00000021296	RRP12	97	74.342	Rhinopithecus_bieti
ENSOMEG00000002609	rrp12	91	74.342	ENSRROG00000032482	RRP12	97	74.342	Rhinopithecus_roxellana
ENSOMEG00000002609	rrp12	91	73.684	ENSSBOG00000030992	RRP12	98	73.684	Saimiri_boliviensis_boliviensis
ENSOMEG00000002609	rrp12	99	63.651	ENSSHAG00000018275	RRP12	97	63.651	Sarcophilus_harrisii
ENSOMEG00000002609	rrp12	99	75.338	ENSSFOG00015016400	rrp12	98	75.020	Scleropages_formosus
ENSOMEG00000002609	rrp12	99	85.044	ENSSMAG00000004047	rrp12	97	85.362	Scophthalmus_maximus
ENSOMEG00000002609	rrp12	99	87.192	ENSSDUG00000022871	rrp12	97	87.192	Seriola_dumerili
ENSOMEG00000002609	rrp12	99	86.874	ENSSLDG00000003038	rrp12	97	86.953	Seriola_lalandi_dorsalis
ENSOMEG00000002609	rrp12	99	61.502	ENSSPUG00000012221	RRP12	98	61.818	Sphenodon_punctatus
ENSOMEG00000002609	rrp12	99	87.908	ENSSPAG00000002261	rrp12	97	88.146	Stegastes_partitus
ENSOMEG00000002609	rrp12	99	63.033	ENSSSCG00000010514	RRP12	97	63.112	Sus_scrofa
ENSOMEG00000002609	rrp12	87	60.592	ENSTGUG00000009711	RRP12	97	60.628	Taeniopygia_guttata
ENSOMEG00000002609	rrp12	99	77.566	ENSTRUG00000012017	rrp12	98	77.240	Takifugu_rubripes
ENSOMEG00000002609	rrp12	99	83.373	ENSTNIG00000016522	rrp12	97	83.373	Tetraodon_nigroviridis
ENSOMEG00000002609	rrp12	76	75.490	ENSTBEG00000004907	RRP12	77	75.490	Tupaia_belangeri
ENSOMEG00000002609	rrp12	99	61.788	ENSTTRG00000009878	RRP12	97	61.709	Tursiops_truncatus
ENSOMEG00000002609	rrp12	99	64.409	ENSUAMG00000009092	RRP12	97	64.331	Ursus_americanus
ENSOMEG00000002609	rrp12	99	62.490	ENSUMAG00000021621	RRP12	97	62.579	Ursus_maritimus
ENSOMEG00000002609	rrp12	99	64.460	ENSVVUG00000023168	RRP12	98	64.145	Vulpes_vulpes
ENSOMEG00000002609	rrp12	99	65.848	ENSXETG00000003430	rrp12	98	65.794	Xenopus_tropicalis
ENSOMEG00000002609	rrp12	91	84.880	ENSXCOG00000012082	rrp12	97	84.629	Xiphophorus_couchianus
ENSOMEG00000002609	rrp12	99	86.248	ENSXMAG00000013498	rrp12	97	86.328	Xiphophorus_maculatus