EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000002661 (Gene tree)
Gene ID: 112158997
Gene Symbol: scrt2
Alias: -
Full Name: transcriptional repressor scratch 1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 4518 bases
Position: chrNVQA01000024.1:23311883-23316400
Accession: 112158997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000001744	zf-C2H2	PF00096.26	4.5e-26	1	5
ENSOMEP00000001744	zf-C2H2	PF00096.26	4.5e-26	2	5
ENSOMEP00000001744	zf-C2H2	PF00096.26	4.5e-26	3	5
ENSOMEP00000001744	zf-C2H2	PF00096.26	4.5e-26	4	5
ENSOMEP00000001744	zf-C2H2	PF00096.26	4.5e-26	5	5
ENSOMEP00000001744	zf-met	PF12874.7	6.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000013657	-	1427	-	ENSOMEP00000001744	319 (aa)	XP_024148514	UPI000CF80E7C

Gene Model

Click here to download ENSOMEG00000002661's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000002661's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000002661	scrt2	54	36.434	ENSOMEG00000017245	-	80	36.538
ENSOMEG00000002661	scrt2	99	59.394	ENSOMEG00000000286	-	100	59.394
ENSOMEG00000002661	scrt2	63	41.000	ENSOMEG00000023773	snai1a	77	41.000
ENSOMEG00000002661	scrt2	50	36.842	ENSOMEG00000005143	prdm5	61	36.842
ENSOMEG00000002661	scrt2	97	65.049	ENSOMEG00000003925	scrt1b	96	65.049
ENSOMEG00000002661	scrt2	50	38.333	ENSOMEG00000019149	-	58	38.333
ENSOMEG00000002661	scrt2	55	35.338	ENSOMEG00000013894	-	52	35.338

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000002661	scrt2	97	65.372	ENSAPOG00000009279	scrt1b	96	65.372	Acanthochromis_polyacanthus
ENSOMEG00000002661	scrt2	100	96.238	ENSAPOG00000003680	scrt2	100	96.238	Acanthochromis_polyacanthus
ENSOMEG00000002661	scrt2	97	60.645	ENSAPOG00000015197	-	97	60.645	Acanthochromis_polyacanthus
ENSOMEG00000002661	scrt2	100	83.386	ENSACIG00000012604	scrt2	100	83.386	Amphilophus_citrinellus
ENSOMEG00000002661	scrt2	97	63.430	ENSACIG00000013613	scrt1b	96	63.430	Amphilophus_citrinellus
ENSOMEG00000002661	scrt2	100	62.346	ENSACIG00000001296	-	100	63.077	Amphilophus_citrinellus
ENSOMEG00000002661	scrt2	97	60.815	ENSACIG00000006586	-	97	60.815	Amphilophus_citrinellus
ENSOMEG00000002661	scrt2	100	96.238	ENSAOCG00000021557	scrt2	100	96.238	Amphiprion_ocellaris
ENSOMEG00000002661	scrt2	97	60.188	ENSAOCG00000023304	-	97	60.188	Amphiprion_ocellaris
ENSOMEG00000002661	scrt2	97	65.372	ENSAOCG00000003910	scrt1b	96	65.372	Amphiprion_ocellaris
ENSOMEG00000002661	scrt2	97	65.372	ENSAPEG00000000869	scrt1b	96	65.372	Amphiprion_percula
ENSOMEG00000002661	scrt2	97	60.188	ENSAPEG00000005677	-	97	60.188	Amphiprion_percula
ENSOMEG00000002661	scrt2	100	96.238	ENSAPEG00000022558	scrt2	100	96.238	Amphiprion_percula
ENSOMEG00000002661	scrt2	100	93.730	ENSATEG00000023998	scrt2	100	93.730	Anabas_testudineus
ENSOMEG00000002661	scrt2	100	62.424	ENSATEG00000003195	-	100	62.424	Anabas_testudineus
ENSOMEG00000002661	scrt2	97	61.093	ENSATEG00000011660	-	97	61.093	Anabas_testudineus
ENSOMEG00000002661	scrt2	97	66.019	ENSATEG00000002302	scrt1b	96	66.019	Anabas_testudineus
ENSOMEG00000002661	scrt2	74	70.213	ENSACAG00000016109	SCRT2	95	70.213	Anolis_carolinensis
ENSOMEG00000002661	scrt2	97	60.372	ENSACLG00000012046	-	97	60.372	Astatotilapia_calliptera
ENSOMEG00000002661	scrt2	97	65.049	ENSACLG00000007162	scrt1b	96	65.049	Astatotilapia_calliptera
ENSOMEG00000002661	scrt2	89	77.544	ENSAMXG00000034158	scrt2	97	77.544	Astyanax_mexicanus
ENSOMEG00000002661	scrt2	97	66.343	ENSAMXG00000038085	scrt1a	97	66.343	Astyanax_mexicanus
ENSOMEG00000002661	scrt2	97	64.103	ENSAMXG00000042624	SCRT1	98	64.103	Astyanax_mexicanus
ENSOMEG00000002661	scrt2	56	55.801	WBGene00000468	ces-1	59	55.801	Caenorhabditis_elegans
ENSOMEG00000002661	scrt2	97	65.372	ENSCPBG00000018899	SCRT1	97	65.372	Chrysemys_picta_bellii
ENSOMEG00000002661	scrt2	88	61.071	ENSCPBG00000027613	SCRT2	100	61.786	Chrysemys_picta_bellii
ENSOMEG00000002661	scrt2	56	90.826	ENSCGRG00000001380	Scrt2	98	90.826	Cricetulus_griseus_crigri
ENSOMEG00000002661	scrt2	97	65.049	ENSCSEG00000008596	scrt1b	96	65.049	Cynoglossus_semilaevis
ENSOMEG00000002661	scrt2	100	90.282	ENSCSEG00000021542	scrt2	100	90.282	Cynoglossus_semilaevis
ENSOMEG00000002661	scrt2	97	60.125	ENSCSEG00000014892	-	97	60.125	Cynoglossus_semilaevis
ENSOMEG00000002661	scrt2	99	60.671	ENSCVAG00000003190	-	100	60.671	Cyprinodon_variegatus
ENSOMEG00000002661	scrt2	97	65.049	ENSCVAG00000009561	scrt1b	96	65.049	Cyprinodon_variegatus
ENSOMEG00000002661	scrt2	100	96.238	ENSCVAG00000021038	scrt2	100	96.238	Cyprinodon_variegatus
ENSOMEG00000002661	scrt2	97	66.667	ENSDARG00000040214	scrt1b	97	66.667	Danio_rerio
ENSOMEG00000002661	scrt2	97	65.372	ENSDARG00000100821	scrt1a	97	65.372	Danio_rerio
ENSOMEG00000002661	scrt2	100	87.730	ENSELUG00000023883	scrt2	100	88.037	Esox_lucius
ENSOMEG00000002661	scrt2	97	66.667	ENSELUG00000005435	scrt1b	96	66.667	Esox_lucius
ENSOMEG00000002661	scrt2	97	66.558	ENSELUG00000022228	scrt1a	96	66.558	Esox_lucius
ENSOMEG00000002661	scrt2	80	64.981	ENSFALG00000005718	SCRT2	97	66.926	Ficedula_albicollis
ENSOMEG00000002661	scrt2	97	65.049	ENSFHEG00000014820	scrt1b	96	65.049	Fundulus_heteroclitus
ENSOMEG00000002661	scrt2	97	60.502	ENSFHEG00000009794	-	97	60.502	Fundulus_heteroclitus
ENSOMEG00000002661	scrt2	100	85.266	ENSFHEG00000005732	scrt2	100	85.266	Fundulus_heteroclitus
ENSOMEG00000002661	scrt2	99	78.723	ENSGMOG00000019519	scrt2	99	78.723	Gadus_morhua
ENSOMEG00000002661	scrt2	96	64.935	ENSGMOG00000000629	scrt1b	96	64.935	Gadus_morhua
ENSOMEG00000002661	scrt2	97	59.223	ENSGALG00000028912	SCRT2	97	61.165	Gallus_gallus
ENSOMEG00000002661	scrt2	100	90.282	ENSGAFG00000003093	scrt2	100	90.282	Gambusia_affinis
ENSOMEG00000002661	scrt2	97	65.049	ENSGAFG00000007636	scrt1b	96	65.049	Gambusia_affinis
ENSOMEG00000002661	scrt2	99	58.934	ENSGAFG00000009650	-	100	58.934	Gambusia_affinis
ENSOMEG00000002661	scrt2	96	62.987	ENSGACG00000008982	scrt1b	96	62.987	Gasterosteus_aculeatus
ENSOMEG00000002661	scrt2	97	60.312	ENSGACG00000004072	-	97	60.312	Gasterosteus_aculeatus
ENSOMEG00000002661	scrt2	66	70.142	ENSGAGG00000020760	-	74	72.986	Gopherus_agassizii
ENSOMEG00000002661	scrt2	100	61.442	ENSGAGG00000020761	SCRT2	100	61.755	Gopherus_agassizii
ENSOMEG00000002661	scrt2	97	64.725	ENSGAGG00000011736	SCRT1	98	64.725	Gopherus_agassizii
ENSOMEG00000002661	scrt2	97	60.502	ENSHBUG00000019101	-	97	60.502	Haplochromis_burtoni
ENSOMEG00000002661	scrt2	100	95.611	ENSHBUG00000012492	scrt2	100	95.611	Haplochromis_burtoni
ENSOMEG00000002661	scrt2	97	65.049	ENSHBUG00000016621	scrt1b	96	65.049	Haplochromis_burtoni
ENSOMEG00000002661	scrt2	97	58.974	ENSHCOG00000016179	-	97	59.936	Hippocampus_comes
ENSOMEG00000002661	scrt2	97	65.372	ENSHCOG00000016704	scrt1b	96	65.372	Hippocampus_comes
ENSOMEG00000002661	scrt2	100	84.688	ENSHCOG00000008116	scrt2	100	84.688	Hippocampus_comes
ENSOMEG00000002661	scrt2	97	65.273	ENSIPUG00000004551	scrt1a	97	65.273	Ictalurus_punctatus
ENSOMEG00000002661	scrt2	97	62.136	ENSIPUG00000005547	-	98	62.136	Ictalurus_punctatus
ENSOMEG00000002661	scrt2	97	60.815	ENSKMAG00000009489	-	97	60.815	Kryptolebias_marmoratus
ENSOMEG00000002661	scrt2	97	65.049	ENSKMAG00000005484	scrt1b	96	65.049	Kryptolebias_marmoratus
ENSOMEG00000002661	scrt2	100	96.238	ENSKMAG00000018087	scrt2	100	96.238	Kryptolebias_marmoratus
ENSOMEG00000002661	scrt2	100	94.688	ENSLBEG00000015419	scrt2	100	94.688	Labrus_bergylta
ENSOMEG00000002661	scrt2	97	58.621	ENSLBEG00000023388	-	97	59.561	Labrus_bergylta
ENSOMEG00000002661	scrt2	97	66.990	ENSLACG00000003588	SCRT1	96	66.990	Latimeria_chalumnae
ENSOMEG00000002661	scrt2	100	65.432	ENSLOCG00000002246	scrt2	100	65.741	Lepisosteus_oculatus
ENSOMEG00000002661	scrt2	97	68.608	ENSLOCG00000007573	scrt1b	97	68.608	Lepisosteus_oculatus
ENSOMEG00000002661	scrt2	100	95.298	ENSMAMG00000001291	scrt2	100	95.298	Mastacembelus_armatus
ENSOMEG00000002661	scrt2	97	65.372	ENSMAMG00000011698	scrt1b	96	65.372	Mastacembelus_armatus
ENSOMEG00000002661	scrt2	97	65.049	ENSMZEG00005005627	scrt1b	96	65.049	Maylandia_zebra
ENSOMEG00000002661	scrt2	100	95.611	ENSMZEG00005026445	scrt2	100	95.611	Maylandia_zebra
ENSOMEG00000002661	scrt2	97	60.502	ENSMZEG00005026702	-	97	60.502	Maylandia_zebra
ENSOMEG00000002661	scrt2	80	66.406	ENSMGAG00000016579	SCRT2	97	67.188	Meleagris_gallopavo
ENSOMEG00000002661	scrt2	97	64.078	ENSMMOG00000003327	scrt1b	96	64.078	Mola_mola
ENSOMEG00000002661	scrt2	97	59.938	ENSMMOG00000018345	-	97	59.938	Mola_mola
ENSOMEG00000002661	scrt2	99	91.824	ENSMMOG00000009272	scrt2	99	94.025	Mola_mola
ENSOMEG00000002661	scrt2	100	78.997	ENSMALG00000013656	scrt2	100	78.997	Monopterus_albus
ENSOMEG00000002661	scrt2	97	65.696	ENSMALG00000012704	scrt1b	96	65.696	Monopterus_albus
ENSOMEG00000002661	scrt2	50	78.616	ENSNGAG00000020815	Scrt2	82	75.000	Nannospalax_galili
ENSOMEG00000002661	scrt2	97	65.372	ENSNBRG00000013983	scrt1b	96	65.372	Neolamprologus_brichardi
ENSOMEG00000002661	scrt2	97	60.502	ENSNBRG00000014882	-	97	60.502	Neolamprologus_brichardi
ENSOMEG00000002661	scrt2	100	83.072	ENSNBRG00000007221	scrt2	100	83.072	Neolamprologus_brichardi
ENSOMEG00000002661	scrt2	97	60.870	ENSONIG00000019809	-	100	60.870	Oreochromis_niloticus
ENSOMEG00000002661	scrt2	100	61.631	ENSONIG00000003152	-	100	61.129	Oreochromis_niloticus
ENSOMEG00000002661	scrt2	97	65.049	ENSONIG00000006007	scrt1b	100	64.610	Oreochromis_niloticus
ENSOMEG00000002661	scrt2	100	95.925	ENSONIG00000016758	scrt2	100	95.925	Oreochromis_niloticus
ENSOMEG00000002661	scrt2	97	59.133	ENSORLG00000022825	-	97	59.133	Oryzias_latipes
ENSOMEG00000002661	scrt2	97	65.049	ENSORLG00000025651	scrt1b	96	65.049	Oryzias_latipes
ENSOMEG00000002661	scrt2	100	98.119	ENSORLG00000024051	scrt2	100	98.119	Oryzias_latipes
ENSOMEG00000002661	scrt2	97	65.049	ENSORLG00020012967	scrt1b	96	65.049	Oryzias_latipes_hni
ENSOMEG00000002661	scrt2	100	98.119	ENSORLG00020011478	scrt2	100	98.119	Oryzias_latipes_hni
ENSOMEG00000002661	scrt2	100	98.119	ENSORLG00015005524	scrt2	100	98.119	Oryzias_latipes_hsok
ENSOMEG00000002661	scrt2	97	59.133	ENSORLG00015010104	-	97	59.133	Oryzias_latipes_hsok
ENSOMEG00000002661	scrt2	97	65.049	ENSORLG00015019165	scrt1b	96	65.049	Oryzias_latipes_hsok
ENSOMEG00000002661	scrt2	97	66.990	ENSPKIG00000020085	scrt1a	97	66.990	Paramormyrops_kingsleyae
ENSOMEG00000002661	scrt2	97	66.667	ENSPKIG00000022303	SCRT1	97	66.667	Paramormyrops_kingsleyae
ENSOMEG00000002661	scrt2	100	77.812	ENSPMGG00000016561	scrt2	100	77.812	Periophthalmus_magnuspinnatus
ENSOMEG00000002661	scrt2	97	60.568	ENSPMGG00000021402	-	97	60.568	Periophthalmus_magnuspinnatus
ENSOMEG00000002661	scrt2	97	64.286	ENSPMGG00000002260	scrt1b	96	64.286	Periophthalmus_magnuspinnatus
ENSOMEG00000002661	scrt2	97	65.049	ENSPFOG00000017719	scrt1b	96	65.049	Poecilia_formosa
ENSOMEG00000002661	scrt2	99	59.756	ENSPFOG00000005616	-	100	59.756	Poecilia_formosa
ENSOMEG00000002661	scrt2	100	96.552	ENSPFOG00000007738	scrt2	100	96.552	Poecilia_formosa
ENSOMEG00000002661	scrt2	100	87.147	ENSPLAG00000005765	scrt2	100	87.147	Poecilia_latipinna
ENSOMEG00000002661	scrt2	97	65.049	ENSPLAG00000009876	scrt1b	96	65.049	Poecilia_latipinna
ENSOMEG00000002661	scrt2	99	59.756	ENSPLAG00000011718	-	100	59.756	Poecilia_latipinna
ENSOMEG00000002661	scrt2	100	87.147	ENSPMEG00000001538	scrt2	100	87.147	Poecilia_mexicana
ENSOMEG00000002661	scrt2	97	65.049	ENSPMEG00000013274	scrt1b	96	65.049	Poecilia_mexicana
ENSOMEG00000002661	scrt2	99	59.756	ENSPMEG00000011706	-	100	59.756	Poecilia_mexicana
ENSOMEG00000002661	scrt2	97	65.049	ENSPREG00000018985	scrt1b	96	65.049	Poecilia_reticulata
ENSOMEG00000002661	scrt2	99	59.451	ENSPREG00000012166	-	100	59.451	Poecilia_reticulata
ENSOMEG00000002661	scrt2	100	96.238	ENSPREG00000001147	scrt2	100	96.238	Poecilia_reticulata
ENSOMEG00000002661	scrt2	100	83.072	ENSPNYG00000013109	scrt2	100	83.072	Pundamilia_nyererei
ENSOMEG00000002661	scrt2	97	65.049	ENSPNYG00000017733	scrt1b	96	65.049	Pundamilia_nyererei
ENSOMEG00000002661	scrt2	97	60.502	ENSPNYG00000008865	-	97	60.502	Pundamilia_nyererei
ENSOMEG00000002661	scrt2	97	66.667	ENSPNAG00000017415	scrt1a	97	66.667	Pygocentrus_nattereri
ENSOMEG00000002661	scrt2	97	61.935	ENSPNAG00000027880	-	98	64.516	Pygocentrus_nattereri
ENSOMEG00000002661	scrt2	97	66.019	ENSSFOG00015001195	SCRT1	97	66.019	Scleropages_formosus
ENSOMEG00000002661	scrt2	97	58.824	ENSSMAG00000005122	-	97	58.824	Scophthalmus_maximus
ENSOMEG00000002661	scrt2	97	64.725	ENSSMAG00000019207	scrt1b	96	64.725	Scophthalmus_maximus
ENSOMEG00000002661	scrt2	97	90.584	ENSSDUG00000001637	scrt2	95	90.584	Seriola_dumerili
ENSOMEG00000002661	scrt2	97	65.696	ENSSDUG00000007752	scrt1b	96	65.696	Seriola_dumerili
ENSOMEG00000002661	scrt2	97	60.188	ENSSDUG00000013215	-	97	60.188	Seriola_dumerili
ENSOMEG00000002661	scrt2	100	95.611	ENSSLDG00000013565	scrt2	100	95.611	Seriola_lalandi_dorsalis
ENSOMEG00000002661	scrt2	97	65.696	ENSSLDG00000017166	scrt1b	96	65.696	Seriola_lalandi_dorsalis
ENSOMEG00000002661	scrt2	97	60.188	ENSSLDG00000016454	-	97	60.188	Seriola_lalandi_dorsalis
ENSOMEG00000002661	scrt2	97	62.903	ENSSPUG00000018637	SCRT2	97	63.548	Sphenodon_punctatus
ENSOMEG00000002661	scrt2	97	60.815	ENSSPAG00000006788	-	97	60.815	Stegastes_partitus
ENSOMEG00000002661	scrt2	97	65.696	ENSSPAG00000002200	scrt1b	96	65.696	Stegastes_partitus
ENSOMEG00000002661	scrt2	100	84.013	ENSSPAG00000014018	scrt2	100	84.013	Stegastes_partitus
ENSOMEG00000002661	scrt2	80	64.844	ENSTGUG00000006801	SCRT2	99	66.797	Taeniopygia_guttata
ENSOMEG00000002661	scrt2	97	60.815	ENSTRUG00000012719	-	97	61.129	Takifugu_rubripes
ENSOMEG00000002661	scrt2	99	87.421	ENSTRUG00000007620	scrt2	99	87.421	Takifugu_rubripes
ENSOMEG00000002661	scrt2	96	63.312	ENSTRUG00000011637	scrt1b	97	63.312	Takifugu_rubripes
ENSOMEG00000002661	scrt2	81	64.202	ENSTRUG00000019558	-	79	64.591	Takifugu_rubripes
ENSOMEG00000002661	scrt2	96	63.636	ENSTNIG00000018384	scrt1b	96	63.636	Tetraodon_nigroviridis
ENSOMEG00000002661	scrt2	99	91.824	ENSTNIG00000012473	scrt2	99	91.824	Tetraodon_nigroviridis
ENSOMEG00000002661	scrt2	100	89.969	ENSXCOG00000014367	scrt2	100	89.969	Xiphophorus_couchianus
ENSOMEG00000002661	scrt2	99	57.994	ENSXCOG00000019861	-	100	57.994	Xiphophorus_couchianus
ENSOMEG00000002661	scrt2	97	65.049	ENSXCOG00000019675	scrt1b	96	65.049	Xiphophorus_couchianus
ENSOMEG00000002661	scrt2	99	59.451	ENSXMAG00000015353	-	100	59.451	Xiphophorus_maculatus
ENSOMEG00000002661	scrt2	97	65.049	ENSXMAG00000027885	scrt1b	96	65.049	Xiphophorus_maculatus
ENSOMEG00000002661	scrt2	100	95.925	ENSXMAG00000028567	scrt2	100	95.925	Xiphophorus_maculatus