EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000002727 (Gene tree)
Gene ID: 112162009
Gene Symbol: pprc1
Alias: -
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator-related 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 10581 bases
Position: chrNVQA01000028.1:21972780-21983360
Accession: 112162009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000022913	RRM_1	PF00076.22	7.7e-09	1	1
ENSOMEP00000022909	RRM_1	PF00076.22	8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000013568	-	4715	XM_024297615	ENSOMEP00000022909	1271 (aa)	XP_024153383	UPI000CF815FC
ENSOMET00000013555	-	5327	-	ENSOMEP00000022913	1240 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000002727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000002727's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000002727	pprc1	61	76.744	ENSACIG00000022532	pprc1	100	74.390	Amphilophus_citrinellus
ENSOMEG00000002727	pprc1	100	57.922	ENSAOCG00000009477	pprc1	100	59.248	Amphiprion_ocellaris
ENSOMEG00000002727	pprc1	100	54.808	ENSACLG00000007927	pprc1	100	54.698	Astatotilapia_calliptera
ENSOMEG00000002727	pprc1	100	51.276	ENSFHEG00000003893	pprc1	79	47.500	Fundulus_heteroclitus
ENSOMEG00000002727	pprc1	100	55.339	ENSHBUG00000001258	pprc1	100	55.069	Haplochromis_burtoni
ENSOMEG00000002727	pprc1	100	49.887	ENSHCOG00000019171	pprc1	100	49.399	Hippocampus_comes
ENSOMEG00000002727	pprc1	62	67.516	ENSIPUG00000007999	pprc1	57	68.627	Ictalurus_punctatus
ENSOMEG00000002727	pprc1	50	34.158	ENSIPUG00000021651	si:dkey-93h22.8	53	32.618	Ictalurus_punctatus
ENSOMEG00000002727	pprc1	84	71.212	ENSLBEG00000015862	pprc1	100	70.909	Labrus_bergylta
ENSOMEG00000002727	pprc1	100	54.631	ENSMZEG00005002989	pprc1	100	54.519	Maylandia_zebra
ENSOMEG00000002727	pprc1	100	81.710	ENSORLG00000008410	pprc1	99	82.344	Oryzias_latipes
ENSOMEG00000002727	pprc1	100	81.502	ENSORLG00020002550	pprc1	99	82.134	Oryzias_latipes_hni
ENSOMEG00000002727	pprc1	100	81.706	ENSORLG00015000733	pprc1	100	82.321	Oryzias_latipes_hsok
ENSOMEG00000002727	pprc1	100	53.788	ENSPFOG00000014566	pprc1	100	54.607	Poecilia_formosa
ENSOMEG00000002727	pprc1	100	53.494	ENSPLAG00000010056	pprc1	100	54.498	Poecilia_latipinna
ENSOMEG00000002727	pprc1	100	53.214	ENSPMEG00000008399	pprc1	100	53.846	Poecilia_mexicana
ENSOMEG00000002727	pprc1	89	70.732	ENSPREG00000020657	pprc1	92	73.780	Poecilia_reticulata
ENSOMEG00000002727	pprc1	99	57.294	ENSSPAG00000002730	pprc1	100	59.322	Stegastes_partitus
ENSOMEG00000002727	pprc1	100	55.004	ENSXMAG00000013470	pprc1	100	54.682	Xiphophorus_maculatus