EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000002941 (Gene tree)
Gene ID
112159536
Gene Symbol
YTHDF1 (1 of many)
Alias
-
Full Name
YTH domain-containing family protein 1-like
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Plus strand
Length
11384 bases
Position
chrNVQA01000024.1:22946928-22958311
Accession
112159536
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000002008YTHPF04146.153.5e-4111
ENSOMEP00000002013YTHPF04146.153.9e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000013208YTHDF1 (1 of many)-2014981-ENSOMEP00000002013606 (aa)XP_024149440UPI000CF7F1DE
ENSOMET00000013217YTHDF1 (1 of many)-2021692-ENSOMEP00000002008563 (aa)--
Gene Model
Click here to download ENSOMEG00000002941's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000002941's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000002941YTHDF19976.006ENSOMEG00000011843YTHDF19976.823
ENSOMEG00000002941YTHDF19662.044ENSOMEG00000008212ythdf39462.523
ENSOMEG00000002941YTHDF19758.047ENSOMEG00000011398ythdf29457.492
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000002941YTHDF19872.906ENSG00000149658YTHDF19672.613Homo_sapiens
ENSOMEG00000002941YTHDF19777.641ENSAPOG00000010796YTHDF19779.107Acanthochromis_polyacanthus
ENSOMEG00000002941YTHDF110086.656ENSAPOG00000004358ythdf110090.088Acanthochromis_polyacanthus
ENSOMEG00000002941YTHDF19572.356ENSAMEG00000017323YTHDF19373.234Ailuropoda_melanoleuca
ENSOMEG00000002941YTHDF19778.919ENSACIG00000020083YTHDF19679.640Amphilophus_citrinellus
ENSOMEG00000002941YTHDF19783.066ENSACIG00000011264ythdf19685.383Amphilophus_citrinellus
ENSOMEG00000002941YTHDF110086.957ENSAOCG00000022251ythdf110090.016Amphiprion_ocellaris
ENSOMEG00000002941YTHDF19778.300ENSAOCG00000012567YTHDF19976.726Amphiprion_ocellaris
ENSOMEG00000002941YTHDF19778.481ENSAPEG00000008750YTHDF19976.886Amphiprion_percula
ENSOMEG00000002941YTHDF110086.957ENSAPEG00000021878ythdf110090.016Amphiprion_percula
ENSOMEG00000002941YTHDF110089.286ENSATEG00000023840ythdf110090.097Anabas_testudineus
ENSOMEG00000002941YTHDF19779.928ENSATEG00000005996YTHDF19976.960Anabas_testudineus
ENSOMEG00000002941YTHDF19573.346ENSAPLG00000005985YTHDF19473.616Anas_platyrhynchos
ENSOMEG00000002941YTHDF19872.500ENSACAG00000005560YTHDF19673.153Anolis_carolinensis
ENSOMEG00000002941YTHDF19961.239ENSANAG00000021022-9660.753Aotus_nancymaae
ENSOMEG00000002941YTHDF19873.488ENSANAG00000034786-9673.465Aotus_nancymaae
ENSOMEG00000002941YTHDF19977.456ENSACLG00000025518YTHDF19977.939Astatotilapia_calliptera
ENSOMEG00000002941YTHDF19770.996ENSBTAG00000010383YTHDF19671.230Bos_taurus
ENSOMEG00000002941YTHDF19873.084ENSCJAG00000010056YTHDF19672.793Callithrix_jacchus
ENSOMEG00000002941YTHDF19072.387ENSCAFG00000012772YTHDF19672.673Canis_familiaris
ENSOMEG00000002941YTHDF19072.387ENSCAFG00020001214YTHDF19672.673Canis_lupus_dingo
ENSOMEG00000002941YTHDF19769.805ENSCHIG00000026494YTHDF19670.758Capra_hircus
ENSOMEG00000002941YTHDF19673.626ENSTSYG00000033436YTHDF19473.985Carlito_syrichta
ENSOMEG00000002941YTHDF19872.193ENSCAPG00000002544YTHDF19172.810Cavia_aperea
ENSOMEG00000002941YTHDF19872.711ENSCPOG00000010202YTHDF19673.056Cavia_porcellus
ENSOMEG00000002941YTHDF19971.605ENSCCAG00000024650YTHDF19672.842Cebus_capucinus
ENSOMEG00000002941YTHDF19873.393ENSCATG00000033272YTHDF19673.333Cercocebus_atys
ENSOMEG00000002941YTHDF19872.727ENSCLAG00000005989YTHDF19672.973Chinchilla_lanigera
ENSOMEG00000002941YTHDF19873.393ENSCSAG00000016266YTHDF19673.333Chlorocebus_sabaeus
ENSOMEG00000002941YTHDF19873.132ENSCPBG00000027183YTHDF19673.333Chrysemys_picta_bellii
ENSOMEG00000002941YTHDF19574.217ENSCANG00000029082YTHDF19374.164Colobus_angolensis_palliatus
ENSOMEG00000002941YTHDF19973.451ENSCGRG00001016568Ythdf19672.973Cricetulus_griseus_chok1gshd
ENSOMEG00000002941YTHDF19574.033ENSCGRG00000009207Ythdf19573.792Cricetulus_griseus_crigri
ENSOMEG00000002941YTHDF19783.333ENSCSEG00000020623YTHDF19783.877Cynoglossus_semilaevis
ENSOMEG00000002941YTHDF110088.780ENSCVAG00000017940ythdf110089.106Cyprinodon_variegatus
ENSOMEG00000002941YTHDF19976.527ENSCVAG00000014378YTHDF19680.370Cyprinodon_variegatus
ENSOMEG00000002941YTHDF19979.200ENSDARG00000016447ythdf19981.199Danio_rerio
ENSOMEG00000002941YTHDF19871.252ENSDNOG00000043590YTHDF19672.093Dasypus_novemcinctus
ENSOMEG00000002941YTHDF19770.545ENSDORG00000002879Ythdf19270.985Dipodomys_ordii
ENSOMEG00000002941YTHDF18258.503ENSETEG00000017860-9556.463Echinops_telfairi
ENSOMEG00000002941YTHDF19972.281ENSEASG00005023186YTHDF19672.432Equus_asinus_asinus
ENSOMEG00000002941YTHDF19972.968ENSECAG00000019475YTHDF19672.871Equus_caballus
ENSOMEG00000002941YTHDF19073.398ENSEEUG00000007461YTHDF19672.941Erinaceus_europaeus
ENSOMEG00000002941YTHDF19971.406ENSELUG00000001906YTHDF19676.493Esox_lucius
ENSOMEG00000002941YTHDF19982.305ENSELUG00000022768ythdf19984.142Esox_lucius
ENSOMEG00000002941YTHDF19771.971ENSFCAG00000008917YTHDF19672.890Felis_catus
ENSOMEG00000002941YTHDF19871.103ENSFALG00000010463YTHDF19672.924Ficedula_albicollis
ENSOMEG00000002941YTHDF19871.403ENSFDAG00000019602YTHDF19672.645Fukomys_damarensis
ENSOMEG00000002941YTHDF110088.762ENSFHEG00000023218ythdf110089.577Fundulus_heteroclitus
ENSOMEG00000002941YTHDF19976.923ENSFHEG00000002540YTHDF19679.852Fundulus_heteroclitus
ENSOMEG00000002941YTHDF19096.809ENSGMOG00000019610ythdf18296.648Gadus_morhua
ENSOMEG00000002941YTHDF19872.193ENSGALG00000005745YTHDF19673.320Gallus_gallus
ENSOMEG00000002941YTHDF19974.722ENSGAFG00000021100YTHDF19976.923Gambusia_affinis
ENSOMEG00000002941YTHDF19877.241ENSGACG00000002613YTHDF19776.910Gasterosteus_aculeatus
ENSOMEG00000002941YTHDF19988.614ENSGACG00000012014ythdf19988.614Gasterosteus_aculeatus
ENSOMEG00000002941YTHDF19873.929ENSGAGG00000003007YTHDF19673.333Gopherus_agassizii
ENSOMEG00000002941YTHDF19873.084ENSGGOG00000008340YTHDF19672.793Gorilla_gorilla
ENSOMEG00000002941YTHDF19977.295ENSHBUG00000004875YTHDF19977.778Haplochromis_burtoni
ENSOMEG00000002941YTHDF19990.939ENSHBUG00000011284ythdf19791.433Haplochromis_burtoni
ENSOMEG00000002941YTHDF19871.936ENSHGLG00000006585YTHDF19673.188Heterocephalus_glaber_female
ENSOMEG00000002941YTHDF19871.936ENSHGLG00100004683YTHDF19673.188Heterocephalus_glaber_male
ENSOMEG00000002941YTHDF19976.006ENSHCOG00000011303YTHDF19679.383Hippocampus_comes
ENSOMEG00000002941YTHDF19784.925ENSHCOG00000008866ythdf19785.641Hippocampus_comes
ENSOMEG00000002941YTHDF19978.571ENSIPUG00000000425Ythdf19978.479Ictalurus_punctatus
ENSOMEG00000002941YTHDF19572.643ENSSTOG00000023001YTHDF19573.420Ictidomys_tridecemlineatus
ENSOMEG00000002941YTHDF19673.333ENSJJAG00000013589Ythdf19573.606Jaculus_jaculus
ENSOMEG00000002941YTHDF110089.362ENSKMAG00000005595ythdf110088.707Kryptolebias_marmoratus
ENSOMEG00000002941YTHDF19976.206ENSKMAG00000017472YTHDF19977.134Kryptolebias_marmoratus
ENSOMEG00000002941YTHDF19778.369ENSLBEG00000012068YTHDF19976.565Labrus_bergylta
ENSOMEG00000002941YTHDF110089.902ENSLBEG00000014105ythdf110090.717Labrus_bergylta
ENSOMEG00000002941YTHDF19772.252ENSLACG00000014195YTHDF19573.985Latimeria_chalumnae
ENSOMEG00000002941YTHDF19976.232ENSLOCG00000005020ythdf19974.338Lepisosteus_oculatus
ENSOMEG00000002941YTHDF19872.500ENSLAFG00000008884YTHDF19672.482Loxodonta_africana
ENSOMEG00000002941YTHDF19873.393ENSMFAG00000042868YTHDF19673.333Macaca_fascicularis
ENSOMEG00000002941YTHDF19873.393ENSMMUG00000009227YTHDF19673.333Macaca_mulatta
ENSOMEG00000002941YTHDF19873.393ENSMNEG00000030851YTHDF19673.333Macaca_nemestrina
ENSOMEG00000002941YTHDF19674.635ENSMLEG00000009252YTHDF19574.349Mandrillus_leucophaeus
ENSOMEG00000002941YTHDF19778.919ENSMAMG00000011072YTHDF19976.518Mastacembelus_armatus
ENSOMEG00000002941YTHDF110085.971ENSMAMG00000024255ythdf110087.928Mastacembelus_armatus
ENSOMEG00000002941YTHDF19977.295ENSMZEG00005023596YTHDF19977.778Maylandia_zebra
ENSOMEG00000002941YTHDF110090.998ENSMZEG00005026397ythdf110091.489Maylandia_zebra
ENSOMEG00000002941YTHDF19573.162ENSMGAG00000006139YTHDF19373.840Meleagris_gallopavo
ENSOMEG00000002941YTHDF19973.050ENSMAUG00000017660Ythdf19773.091Mesocricetus_auratus
ENSOMEG00000002941YTHDF19871.555ENSMICG00000032266YTHDF19672.252Microcebus_murinus
ENSOMEG00000002941YTHDF19873.214ENSMOCG00000013573Ythdf19673.153Microtus_ochrogaster
ENSOMEG00000002941YTHDF19876.844ENSMMOG00000020467YTHDF19975.040Mola_mola
ENSOMEG00000002941YTHDF19585.279ENSMMOG00000017500ythdf19585.835Mola_mola
ENSOMEG00000002941YTHDF19073.386ENSMODG00000016842YTHDF19673.674Monodelphis_domestica
ENSOMEG00000002941YTHDF19778.919ENSMALG00000022209YTHDF19976.414Monopterus_albus
ENSOMEG00000002941YTHDF110087.742ENSMALG00000015672ythdf110088.387Monopterus_albus
ENSOMEG00000002941YTHDF19873.310MGP_CAROLIEiJ_G0024790Ythdf19673.153Mus_caroli
ENSOMEG00000002941YTHDF19873.310ENSMUSG00000038848Ythdf19673.153Mus_musculus
ENSOMEG00000002941YTHDF19873.310MGP_PahariEiJ_G0026237Ythdf19673.153Mus_pahari
ENSOMEG00000002941YTHDF19873.310MGP_SPRETEiJ_G0025715Ythdf19673.153Mus_spretus
ENSOMEG00000002941YTHDF19069.822ENSMPUG00000008111YTHDF19671.287Mustela_putorius_furo
ENSOMEG00000002941YTHDF19673.857ENSMLUG00000002241YTHDF19373.840Myotis_lucifugus
ENSOMEG00000002941YTHDF19873.619ENSNGAG00000000334Ythdf19673.333Nannospalax_galili
ENSOMEG00000002941YTHDF19590.223ENSNBRG00000008213ythdf19691.081Neolamprologus_brichardi
ENSOMEG00000002941YTHDF19779.024ENSNBRG00000015321YTHDF19679.385Neolamprologus_brichardi
ENSOMEG00000002941YTHDF19567.718ENSOPRG00000001758-9868.302Ochotona_princeps
ENSOMEG00000002941YTHDF19759.571ENSODEG00000000074-9560.823Octodon_degus
ENSOMEG00000002941YTHDF19871.735ENSODEG00000004380-9672.679Octodon_degus
ENSOMEG00000002941YTHDF19589.329ENSONIG00000016799ythdf19991.637Oreochromis_niloticus
ENSOMEG00000002941YTHDF19872.968ENSOANG00000003723YTHDF19673.036Ornithorhynchus_anatinus
ENSOMEG00000002941YTHDF110097.213ENSORLG00000014665YTHDF110097.213Oryzias_latipes
ENSOMEG00000002941YTHDF19976.613ENSORLG00000009739YTHDF19976.252Oryzias_latipes
ENSOMEG00000002941YTHDF19976.414ENSORLG00020001332YTHDF19976.786Oryzias_latipes_hni
ENSOMEG00000002941YTHDF110097.701ENSORLG00020000307ythdf110097.701Oryzias_latipes_hni
ENSOMEG00000002941YTHDF110097.537ENSORLG00015006302ythdf110097.537Oryzias_latipes_hsok
ENSOMEG00000002941YTHDF19976.290ENSORLG00015018321YTHDF19975.929Oryzias_latipes_hsok
ENSOMEG00000002941YTHDF19870.996ENSOGAG00000000480YTHDF19670.968Otolemur_garnettii
ENSOMEG00000002941YTHDF19570.654ENSOARG00000011639YTHDF19369.888Ovis_aries
ENSOMEG00000002941YTHDF19773.779ENSPPAG00000023277YTHDF19573.792Pan_paniscus
ENSOMEG00000002941YTHDF19772.464ENSPPRG00000020805YTHDF19673.561Panthera_pardus
ENSOMEG00000002941YTHDF17980.543ENSPTIG00000017355YTHDF19470.169Panthera_tigris_altaica
ENSOMEG00000002941YTHDF19873.084ENSPTRG00000013730YTHDF19672.793Pan_troglodytes
ENSOMEG00000002941YTHDF19873.393ENSPANG00000021472YTHDF19673.333Papio_anubis
ENSOMEG00000002941YTHDF19970.819ENSPKIG00000005427ythdf19670.599Paramormyrops_kingsleyae
ENSOMEG00000002941YTHDF19973.509ENSPKIG00000005026YTHDF19673.619Paramormyrops_kingsleyae
ENSOMEG00000002941YTHDF19673.874ENSPSIG00000005529YTHDF19373.897Pelodiscus_sinensis
ENSOMEG00000002941YTHDF19576.977ENSPMGG00000009101YTHDF19679.718Periophthalmus_magnuspinnatus
ENSOMEG00000002941YTHDF19683.779ENSPMGG00000015328ythdf19984.549Periophthalmus_magnuspinnatus
ENSOMEG00000002941YTHDF19674.270ENSPEMG00000020199Ythdf19673.792Peromyscus_maniculatus_bairdii
ENSOMEG00000002941YTHDF19973.462ENSPCIG00000017170YTHDF19673.870Phascolarctos_cinereus
ENSOMEG00000002941YTHDF110088.361ENSPFOG00000005405ythdf110089.344Poecilia_formosa
ENSOMEG00000002941YTHDF110088.361ENSPLAG00000006653ythdf110089.344Poecilia_latipinna
ENSOMEG00000002941YTHDF19975.159ENSPLAG00000006298YTHDF19976.726Poecilia_latipinna
ENSOMEG00000002941YTHDF19777.698ENSPMEG00000020969-9976.726Poecilia_mexicana
ENSOMEG00000002941YTHDF110087.889ENSPMEG00000023753ythdf110089.525Poecilia_mexicana
ENSOMEG00000002941YTHDF19675.952ENSPREG00000017662YTHDF19877.114Poecilia_reticulata
ENSOMEG00000002941YTHDF110089.016ENSPREG00000002173ythdf110090.000Poecilia_reticulata
ENSOMEG00000002941YTHDF18487.895ENSPPYG00000011226YTHDF19689.071Pongo_abelii
ENSOMEG00000002941YTHDF19069.903ENSPCAG00000002452YTHDF19869.903Procavia_capensis
ENSOMEG00000002941YTHDF19871.731ENSPCOG00000025969YTHDF19672.613Propithecus_coquereli
ENSOMEG00000002941YTHDF19669.245ENSPVAG00000017568YTHDF19767.190Pteropus_vampyrus
ENSOMEG00000002941YTHDF19990.939ENSPNYG00000014007ythdf19791.433Pundamilia_nyererei
ENSOMEG00000002941YTHDF19977.295ENSPNYG00000002266YTHDF19977.778Pundamilia_nyererei
ENSOMEG00000002941YTHDF19981.107ENSPNAG00000012447ythdf19982.410Pygocentrus_nattereri
ENSOMEG00000002941YTHDF19873.132ENSRNOG00000027015Ythdf19673.153Rattus_norvegicus
ENSOMEG00000002941YTHDF19872.064ENSRBIG00000044959YTHDF19672.613Rhinopithecus_bieti
ENSOMEG00000002941YTHDF19872.064ENSRROG00000033014YTHDF19672.613Rhinopithecus_roxellana
ENSOMEG00000002941YTHDF19672.477ENSSBOG00000027278YTHDF19671.344Saimiri_boliviensis_boliviensis
ENSOMEG00000002941YTHDF19573.761ENSSHAG00000010430YTHDF18374.354Sarcophilus_harrisii
ENSOMEG00000002941YTHDF19974.055ENSSFOG00015000284ythdf19975.163Scleropages_formosus
ENSOMEG00000002941YTHDF19878.284ENSSMAG00000007635YTHDF19776.393Scophthalmus_maximus
ENSOMEG00000002941YTHDF16995.541ENSSMAG00000013715ythdf19388.722Scophthalmus_maximus
ENSOMEG00000002941YTHDF19579.664ENSSDUG00000015823YTHDF19974.531Seriola_dumerili
ENSOMEG00000002941YTHDF110089.338ENSSDUG00000000435ythdf110090.630Seriola_dumerili
ENSOMEG00000002941YTHDF19974.290ENSSLDG00000001054YTHDF19294.972Seriola_lalandi_dorsalis
ENSOMEG00000002941YTHDF19989.286ENSSLDG00000024948ythdf19990.584Seriola_lalandi_dorsalis
ENSOMEG00000002941YTHDF19072.941ENSSPUG00000015143YTHDF19673.320Sphenodon_punctatus
ENSOMEG00000002941YTHDF19777.005ENSSPAG00000003666YTHDF19976.122Stegastes_partitus
ENSOMEG00000002941YTHDF110088.320ENSSPAG00000014989ythdf110089.280Stegastes_partitus
ENSOMEG00000002941YTHDF19870.683ENSSSCG00000040086YTHDF19670.939Sus_scrofa
ENSOMEG00000002941YTHDF19573.346ENSTGUG00000007565YTHDF19574.026Taeniopygia_guttata
ENSOMEG00000002941YTHDF19588.851ENSTRUG00000004288ythdf19789.365Takifugu_rubripes
ENSOMEG00000002941YTHDF19773.187ENSTRUG00000005049YTHDF19776.000Takifugu_rubripes
ENSOMEG00000002941YTHDF19775.224ENSTNIG00000003975YTHDF19674.597Tetraodon_nigroviridis
ENSOMEG00000002941YTHDF19778.957ENSTNIG00000012490ythdf19680.829Tetraodon_nigroviridis
ENSOMEG00000002941YTHDF19970.945ENSTTRG00000001804YTHDF19771.300Tursiops_truncatus
ENSOMEG00000002941YTHDF19672.376ENSUAMG00000011021YTHDF19672.871Ursus_americanus
ENSOMEG00000002941YTHDF19071.233ENSUMAG00000022290YTHDF19672.475Ursus_maritimus
ENSOMEG00000002941YTHDF19072.584ENSVVUG00000015275YTHDF19672.475Vulpes_vulpes
ENSOMEG00000002941YTHDF19773.118ENSXETG00000027086ythdf19473.358Xenopus_tropicalis
ENSOMEG00000002941YTHDF19984.348ENSXCOG00000002490ythdf19386.879Xiphophorus_couchianus
ENSOMEG00000002941YTHDF19675.779ENSXCOG00000008115YTHDF19976.949Xiphophorus_couchianus
ENSOMEG00000002941YTHDF19579.006ENSXMAG00000015644YTHDF19679.926Xiphophorus_maculatus
ENSOMEG00000002941YTHDF110089.327ENSXMAG00000008525ythdf110090.148Xiphophorus_maculatus

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