EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000003134 (Gene tree)
Gene ID: 112142443
Gene Symbol: larp1
Alias: -
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 48214 bases
Position: chrNVQA01000005.1:20889887-20938100
Accession: 112142443
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000002211	La	PF05383.17	2e-21	1	1
ENSOMEP00000002197	La	PF05383.17	2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000012898	-	3661	-	ENSOMEP00000002197	1048 (aa)	XP_024121596	UPI000CF7D70C
ENSOMET00000012872	-	3733	-	ENSOMEP00000002211	1072 (aa)	XP_024121595	UPI000CF8198C

Gene Model

Click here to download ENSOMEG00000003134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000003134's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000003134	larp1	93	51.373	ENSOMEG00000004210	larp1b	91	51.891

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000003134	larp1	87	65.078	ENSG00000155506	LARP1	90	80.000	Homo_sapiens
ENSOMEG00000003134	larp1	89	89.333	ENSAPOG00000020685	larp1	99	89.333	Acanthochromis_polyacanthus
ENSOMEG00000003134	larp1	86	66.808	ENSAMEG00000016673	LARP1	96	66.702	Ailuropoda_melanoleuca
ENSOMEG00000003134	larp1	100	74.907	ENSACIG00000012994	larp1	100	74.537	Amphilophus_citrinellus
ENSOMEG00000003134	larp1	79	88.521	ENSAOCG00000007792	larp1	100	86.864	Amphiprion_ocellaris
ENSOMEG00000003134	larp1	100	85.902	ENSAPEG00000022246	larp1	100	84.789	Amphiprion_percula
ENSOMEG00000003134	larp1	97	85.421	ENSATEG00000013523	larp1	100	83.813	Anabas_testudineus
ENSOMEG00000003134	larp1	83	71.476	ENSAPLG00000007559	LARP1	99	69.737	Anas_platyrhynchos
ENSOMEG00000003134	larp1	89	69.057	ENSACAG00000004071	LARP1	97	71.285	Anolis_carolinensis
ENSOMEG00000003134	larp1	86	66.139	ENSANAG00000029949	LARP1	96	65.295	Aotus_nancymaae
ENSOMEG00000003134	larp1	100	83.303	ENSACLG00000015256	larp1	99	85.743	Astatotilapia_calliptera
ENSOMEG00000003134	larp1	98	74.674	ENSAMXG00000000859	larp1	99	73.856	Astyanax_mexicanus
ENSOMEG00000003134	larp1	97	62.626	ENSBTAG00000008443	LARP1	97	62.362	Bos_taurus
ENSOMEG00000003134	larp1	97	62.031	ENSCJAG00000004454	LARP1	97	61.927	Callithrix_jacchus
ENSOMEG00000003134	larp1	86	67.020	ENSCAFG00000017639	LARP1	97	66.915	Canis_familiaris
ENSOMEG00000003134	larp1	80	68.427	ENSCAFG00020023860	LARP1	95	68.318	Canis_lupus_dingo
ENSOMEG00000003134	larp1	97	65.009	ENSCHIG00000014414	LARP1	97	62.956	Capra_hircus
ENSOMEG00000003134	larp1	86	67.126	ENSTSYG00000013732	LARP1	97	64.859	Carlito_syrichta
ENSOMEG00000003134	larp1	78	65.808	ENSCAPG00000013865	LARP1	85	65.452	Cavia_aperea
ENSOMEG00000003134	larp1	86	66.249	ENSCPOG00000003377	LARP1	96	66.809	Cavia_porcellus
ENSOMEG00000003134	larp1	97	61.848	ENSCCAG00000025201	LARP1	97	61.835	Cebus_capucinus
ENSOMEG00000003134	larp1	97	61.270	ENSCATG00000030675	LARP1	97	61.353	Cercocebus_atys
ENSOMEG00000003134	larp1	88	65.806	ENSCLAG00000012755	LARP1	96	66.809	Chinchilla_lanigera
ENSOMEG00000003134	larp1	79	67.323	ENSCSAG00000010800	LARP1	95	67.207	Chlorocebus_sabaeus
ENSOMEG00000003134	larp1	82	66.265	ENSCHOG00000012716	LARP1	89	66.265	Choloepus_hoffmanni
ENSOMEG00000003134	larp1	89	71.099	ENSCPBG00000002173	LARP1	91	70.860	Chrysemys_picta_bellii
ENSOMEG00000003134	larp1	87	66.212	ENSCANG00000037418	LARP1	91	66.000	Colobus_angolensis_palliatus
ENSOMEG00000003134	larp1	97	63.128	ENSCGRG00001016913	Larp1	97	62.546	Cricetulus_griseus_chok1gshd
ENSOMEG00000003134	larp1	85	64.882	ENSCGRG00000009916	Larp1	99	63.907	Cricetulus_griseus_crigri
ENSOMEG00000003134	larp1	100	82.336	ENSCSEG00000016431	larp1	100	80.855	Cynoglossus_semilaevis
ENSOMEG00000003134	larp1	99	84.434	ENSCVAG00000022687	larp1	100	84.308	Cyprinodon_variegatus
ENSOMEG00000003134	larp1	99	68.696	ENSDARG00000101722	larp1	99	68.506	Danio_rerio
ENSOMEG00000003134	larp1	97	61.974	ENSDNOG00000012073	LARP1	97	61.935	Dasypus_novemcinctus
ENSOMEG00000003134	larp1	87	63.684	ENSDORG00000002897	Larp1	96	65.148	Dipodomys_ordii
ENSOMEG00000003134	larp1	82	67.259	ENSETEG00000020251	LARP1	100	67.149	Echinops_telfairi
ENSOMEG00000003134	larp1	97	61.722	ENSEASG00005001070	LARP1	97	62.028	Equus_asinus_asinus
ENSOMEG00000003134	larp1	97	61.722	ENSECAG00000017002	LARP1	78	62.190	Equus_caballus
ENSOMEG00000003134	larp1	84	64.309	ENSEEUG00000001065	LARP1	96	65.066	Erinaceus_europaeus
ENSOMEG00000003134	larp1	99	75.856	ENSELUG00000019403	larp1	99	74.235	Esox_lucius
ENSOMEG00000003134	larp1	97	61.974	ENSFCAG00000000592	LARP1	97	62.132	Felis_catus
ENSOMEG00000003134	larp1	78	73.565	ENSFALG00000008335	LARP1	99	73.095	Ficedula_albicollis
ENSOMEG00000003134	larp1	85	67.199	ENSFDAG00000021125	LARP1	96	66.880	Fukomys_damarensis
ENSOMEG00000003134	larp1	63	74.780	ENSFHEG00000020307	larp1	97	77.419	Fundulus_heteroclitus
ENSOMEG00000003134	larp1	99	67.227	ENSGALG00000040109	LARP1	97	71.577	Gallus_gallus
ENSOMEG00000003134	larp1	97	67.331	ENSGAGG00000025113	LARP1	95	71.429	Gopherus_agassizii
ENSOMEG00000003134	larp1	87	65.828	ENSGGOG00000006048	LARP1	91	65.931	Gorilla_gorilla
ENSOMEG00000003134	larp1	100	83.685	ENSHBUG00000020762	larp1	99	86.182	Haplochromis_burtoni
ENSOMEG00000003134	larp1	97	62.059	ENSHGLG00000006267	LARP1	97	61.767	Heterocephalus_glaber_female
ENSOMEG00000003134	larp1	85	66.809	ENSHGLG00100014230	-	96	66.489	Heterocephalus_glaber_male
ENSOMEG00000003134	larp1	88	57.773	ENSHGLG00100003395	-	88	57.413	Heterocephalus_glaber_male
ENSOMEG00000003134	larp1	88	91.162	ENSHCOG00000010786	larp1	99	89.242	Hippocampus_comes
ENSOMEG00000003134	larp1	99	73.073	ENSIPUG00000019105	Larp1	99	72.693	Ictalurus_punctatus
ENSOMEG00000003134	larp1	86	66.170	ENSSTOG00000005678	LARP1	96	65.851	Ictidomys_tridecemlineatus
ENSOMEG00000003134	larp1	97	60.301	ENSJJAG00000016950	Larp1	97	60.376	Jaculus_jaculus
ENSOMEG00000003134	larp1	100	84.049	ENSKMAG00000018468	larp1	99	85.832	Kryptolebias_marmoratus
ENSOMEG00000003134	larp1	99	81.061	ENSLBEG00000027172	larp1	100	79.982	Labrus_bergylta
ENSOMEG00000003134	larp1	94	76.000	ENSLOCG00000012457	larp1	99	74.229	Lepisosteus_oculatus
ENSOMEG00000003134	larp1	97	62.547	ENSLAFG00000008991	LARP1	97	62.804	Loxodonta_africana
ENSOMEG00000003134	larp1	85	66.454	ENSMFAG00000031651	LARP1	90	66.453	Macaca_fascicularis
ENSOMEG00000003134	larp1	85	65.665	ENSMMUG00000009411	LARP1	96	65.773	Macaca_mulatta
ENSOMEG00000003134	larp1	81	66.929	ENSMNEG00000039294	LARP1	95	67.746	Macaca_nemestrina
ENSOMEG00000003134	larp1	85	66.667	ENSMLEG00000035142	LARP1	90	66.667	Mandrillus_leucophaeus
ENSOMEG00000003134	larp1	100	85.178	ENSMAMG00000021788	larp1	100	83.989	Mastacembelus_armatus
ENSOMEG00000003134	larp1	100	83.303	ENSMZEG00005009345	larp1	99	85.743	Maylandia_zebra
ENSOMEG00000003134	larp1	88	70.724	ENSMGAG00000005696	LARP1	99	70.951	Meleagris_gallopavo
ENSOMEG00000003134	larp1	99	62.329	ENSMAUG00000001385	Larp1	99	61.685	Mesocricetus_auratus
ENSOMEG00000003134	larp1	86	67.412	ENSMICG00000000837	LARP1	95	67.935	Microcebus_murinus
ENSOMEG00000003134	larp1	97	63.060	ENSMOCG00000008920	Larp1	97	62.921	Microtus_ochrogaster
ENSOMEG00000003134	larp1	95	62.405	ENSMMOG00000013364	larp1	99	62.082	Mola_mola
ENSOMEG00000003134	larp1	88	67.427	ENSMODG00000008663	LARP1	98	65.535	Monodelphis_domestica
ENSOMEG00000003134	larp1	100	83.960	ENSMALG00000017180	larp1	100	82.676	Monopterus_albus
ENSOMEG00000003134	larp1	97	63.197	MGP_CAROLIEiJ_G0016383	Larp1	97	63.390	Mus_caroli
ENSOMEG00000003134	larp1	97	63.290	ENSMUSG00000037331	Larp1	97	63.483	Mus_musculus
ENSOMEG00000003134	larp1	97	63.080	MGP_PahariEiJ_G0017518	Larp1	97	62.767	Mus_pahari
ENSOMEG00000003134	larp1	97	63.231	MGP_SPRETEiJ_G0017225	Larp1	97	63.483	Mus_spretus
ENSOMEG00000003134	larp1	82	58.798	ENSMPUG00000013564	LARP1	99	58.613	Mustela_putorius_furo
ENSOMEG00000003134	larp1	86	63.464	ENSMLUG00000002608	LARP1	97	63.665	Myotis_lucifugus
ENSOMEG00000003134	larp1	86	66.132	ENSNGAG00000001098	Larp1	95	66.026	Nannospalax_galili
ENSOMEG00000003134	larp1	92	84.592	ENSNBRG00000008963	larp1	98	83.555	Neolamprologus_brichardi
ENSOMEG00000003134	larp1	86	67.022	ENSNLEG00000016588	LARP1	96	66.127	Nomascus_leucogenys
ENSOMEG00000003134	larp1	87	62.487	ENSMEUG00000002957	LARP1	99	62.696	Notamacropus_eugenii
ENSOMEG00000003134	larp1	85	67.128	ENSOPRG00000013014	LARP1	96	66.916	Ochotona_princeps
ENSOMEG00000003134	larp1	87	66.038	ENSODEG00000010824	LARP1	96	66.489	Octodon_degus
ENSOMEG00000003134	larp1	99	80.199	ENSONIG00000017308	larp1	100	80.182	Oreochromis_niloticus
ENSOMEG00000003134	larp1	91	68.373	ENSOANG00000005096	LARP1	99	66.700	Ornithorhynchus_anatinus
ENSOMEG00000003134	larp1	97	63.138	ENSOCUG00000013066	LARP1	97	62.849	Oryctolagus_cuniculus
ENSOMEG00000003134	larp1	100	93.370	ENSORLG00000000824	larp1	100	92.541	Oryzias_latipes
ENSOMEG00000003134	larp1	100	93.450	ENSORLG00020022241	larp1	100	92.712	Oryzias_latipes_hni
ENSOMEG00000003134	larp1	100	94.625	ENSORLG00015007538	larp1	100	94.815	Oryzias_latipes_hsok
ENSOMEG00000003134	larp1	86	65.935	ENSOGAG00000016750	LARP1	96	66.489	Otolemur_garnettii
ENSOMEG00000003134	larp1	86	67.380	ENSOARG00000009893	LARP1	97	66.773	Ovis_aries
ENSOMEG00000003134	larp1	86	66.034	ENSPPAG00000042993	LARP1	91	66.138	Pan_paniscus
ENSOMEG00000003134	larp1	86	66.737	ENSPPRG00000009780	LARP1	92	66.103	Panthera_pardus
ENSOMEG00000003134	larp1	86	67.019	ENSPTIG00000007013	LARP1	91	67.019	Panthera_tigris_altaica
ENSOMEG00000003134	larp1	97	61.121	ENSPTRG00000017447	LARP1	97	61.213	Pan_troglodytes
ENSOMEG00000003134	larp1	97	61.270	ENSPANG00000008080	LARP1	97	61.353	Papio_anubis
ENSOMEG00000003134	larp1	100	74.352	ENSPKIG00000010096	larp1	100	74.006	Paramormyrops_kingsleyae
ENSOMEG00000003134	larp1	99	66.977	ENSPKIG00000017153	-	99	68.083	Paramormyrops_kingsleyae
ENSOMEG00000003134	larp1	95	78.022	ENSPMGG00000011599	larp1	97	78.821	Periophthalmus_magnuspinnatus
ENSOMEG00000003134	larp1	88	64.536	ENSPEMG00000022523	Larp1	96	64.879	Peromyscus_maniculatus_bairdii
ENSOMEG00000003134	larp1	97	65.042	ENSPCIG00000019242	LARP1	89	63.212	Phascolarctos_cinereus
ENSOMEG00000003134	larp1	100	81.596	ENSPFOG00000005836	larp1	100	80.581	Poecilia_formosa
ENSOMEG00000003134	larp1	100	80.798	ENSPLAG00000008936	larp1	100	82.358	Poecilia_latipinna
ENSOMEG00000003134	larp1	100	81.596	ENSPMEG00000013656	larp1	100	80.581	Poecilia_mexicana
ENSOMEG00000003134	larp1	89	84.600	ENSPREG00000005726	larp1	99	83.265	Poecilia_reticulata
ENSOMEG00000003134	larp1	85	64.894	ENSPCAG00000006407	LARP1	97	64.781	Procavia_capensis
ENSOMEG00000003134	larp1	85	59.362	ENSPCOG00000016949	LARP1	96	61.686	Propithecus_coquereli
ENSOMEG00000003134	larp1	97	61.927	ENSPVAG00000002262	LARP1	97	62.018	Pteropus_vampyrus
ENSOMEG00000003134	larp1	100	83.394	ENSPNYG00000007938	larp1	99	85.845	Pundamilia_nyererei
ENSOMEG00000003134	larp1	97	75.315	ENSPNAG00000021427	larp1	98	75.508	Pygocentrus_nattereri
ENSOMEG00000003134	larp1	88	65.317	ENSRNOG00000031544	Larp1	98	64.573	Rattus_norvegicus
ENSOMEG00000003134	larp1	86	66.209	ENSRBIG00000038005	LARP1	91	66.208	Rhinopithecus_bieti
ENSOMEG00000003134	larp1	86	66.209	ENSRROG00000034073	LARP1	95	67.977	Rhinopithecus_roxellana
ENSOMEG00000003134	larp1	86	65.705	ENSSBOG00000019816	LARP1	96	65.812	Saimiri_boliviensis_boliviensis
ENSOMEG00000003134	larp1	88	68.619	ENSSHAG00000011115	LARP1	99	66.701	Sarcophilus_harrisii
ENSOMEG00000003134	larp1	97	74.013	ENSSFOG00015018058	-	98	72.571	Scleropages_formosus
ENSOMEG00000003134	larp1	87	78.059	ENSSFOG00015020304	larp1	95	75.887	Scleropages_formosus
ENSOMEG00000003134	larp1	94	83.086	ENSSMAG00000007468	larp1	98	82.987	Scophthalmus_maximus
ENSOMEG00000003134	larp1	100	84.229	ENSSDUG00000000268	larp1	100	83.874	Seriola_dumerili
ENSOMEG00000003134	larp1	83	81.033	ENSSLDG00000016505	larp1	99	80.112	Seriola_lalandi_dorsalis
ENSOMEG00000003134	larp1	55	82.731	ENSSARG00000013907	-	83	82.800	Sorex_araneus
ENSOMEG00000003134	larp1	99	63.417	ENSSPUG00000012179	-	99	64.171	Sphenodon_punctatus
ENSOMEG00000003134	larp1	100	85.622	ENSSPAG00000003910	larp1	100	84.332	Stegastes_partitus
ENSOMEG00000003134	larp1	97	61.609	ENSSSCG00000017069	LARP1	97	66.705	Sus_scrofa
ENSOMEG00000003134	larp1	85	71.321	ENSTGUG00000000704	LARP1	100	68.538	Taeniopygia_guttata
ENSOMEG00000003134	larp1	99	81.423	ENSTRUG00000009470	larp1	99	80.591	Takifugu_rubripes
ENSOMEG00000003134	larp1	83	65.525	ENSTBEG00000003381	LARP1	99	65.188	Tupaia_belangeri
ENSOMEG00000003134	larp1	87	65.344	ENSTTRG00000015934	LARP1	97	66.136	Tursiops_truncatus
ENSOMEG00000003134	larp1	97	61.905	ENSUAMG00000019334	LARP1	97	61.735	Ursus_americanus
ENSOMEG00000003134	larp1	85	66.667	ENSUMAG00000002934	LARP1	96	68.100	Ursus_maritimus
ENSOMEG00000003134	larp1	80	68.427	ENSVVUG00000004644	LARP1	95	68.318	Vulpes_vulpes
ENSOMEG00000003134	larp1	94	67.195	ENSXETG00000008413	larp1	97	67.031	Xenopus_tropicalis
ENSOMEG00000003134	larp1	88	80.362	ENSXCOG00000004022	larp1	99	81.530	Xiphophorus_couchianus
ENSOMEG00000003134	larp1	100	81.488	ENSXMAG00000018780	larp1	100	80.654	Xiphophorus_maculatus