EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000003155 (Gene tree)
Gene ID: 112142472
Gene Symbol: srrt
Alias: -
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 11934 bases
Position: chrNVQA01000005.1:8869911-8881844
Accession: 112142472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000002206	ARS2	PF04959.13	2.8e-87	1	1
ENSOMEP00000002216	ARS2	PF04959.13	3e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000012888	-	2409	-	ENSOMEP00000002206	802 (aa)	-	-
ENSOMET00000012858	-	6820	-	ENSOMEP00000002216	872 (aa)	XP_024121658	UPI000CF7C49F

Gene Model

Click here to download ENSOMEG00000003155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000003155's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000003155	srrt	87	67.249	ENSOMEG00000006963	-	96	58.404

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000003155	srrt	90	74.459	ENSG00000087087	SRRT	98	87.097	Homo_sapiens
ENSOMEG00000003155	srrt	89	92.341	ENSAPOG00000002304	srrt	98	87.007	Acanthochromis_polyacanthus
ENSOMEG00000003155	srrt	85	75.604	ENSAMEG00000014506	SRRT	96	65.517	Ailuropoda_melanoleuca
ENSOMEG00000003155	srrt	95	86.849	ENSACIG00000015795	srrt	98	87.326	Amphilophus_citrinellus
ENSOMEG00000003155	srrt	90	92.560	ENSAOCG00000009693	srrt	98	87.442	Amphiprion_ocellaris
ENSOMEG00000003155	srrt	93	54.684	ENSAOCG00000009189	-	96	57.621	Amphiprion_ocellaris
ENSOMEG00000003155	srrt	90	92.123	ENSAPEG00000003646	srrt	97	92.050	Amphiprion_percula
ENSOMEG00000003155	srrt	93	54.684	ENSAPEG00000020016	-	96	57.621	Amphiprion_percula
ENSOMEG00000003155	srrt	90	90.570	ENSATEG00000014425	srrt	93	90.985	Anabas_testudineus
ENSOMEG00000003155	srrt	58	61.711	ENSATEG00000003652	-	91	62.846	Anabas_testudineus
ENSOMEG00000003155	srrt	91	75.000	ENSACAG00000001014	SRRT	98	65.868	Anolis_carolinensis
ENSOMEG00000003155	srrt	88	74.194	ENSANAG00000031718	SRRT	96	65.473	Aotus_nancymaae
ENSOMEG00000003155	srrt	83	65.245	ENSACLG00000009423	-	96	56.517	Astatotilapia_calliptera
ENSOMEG00000003155	srrt	90	91.209	ENSACLG00000013156	srrt	94	86.845	Astatotilapia_calliptera
ENSOMEG00000003155	srrt	90	81.473	ENSAMXG00000016671	srrt	95	70.704	Astyanax_mexicanus
ENSOMEG00000003155	srrt	56	73.763	ENSBTAG00000001134	SRRT	96	65.167	Bos_taurus
ENSOMEG00000003155	srrt	76	39.567	WBGene00017085	E01A2.2	88	42.675	Caenorhabditis_elegans
ENSOMEG00000003155	srrt	90	74.194	ENSCJAG00000014917	SRRT	96	65.473	Callithrix_jacchus
ENSOMEG00000003155	srrt	96	63.731	ENSCAFG00000023538	SRRT	96	65.621	Canis_familiaris
ENSOMEG00000003155	srrt	98	63.345	ENSCAFG00020013358	SRRT	99	63.139	Canis_lupus_dingo
ENSOMEG00000003155	srrt	93	74.242	ENSCHIG00000010495	SRRT	96	65.283	Capra_hircus
ENSOMEG00000003155	srrt	96	62.907	ENSTSYG00000036426	SRRT	99	63.795	Carlito_syrichta
ENSOMEG00000003155	srrt	91	75.165	ENSCAPG00000013586	SRRT	100	66.156	Cavia_aperea
ENSOMEG00000003155	srrt	89	73.233	ENSCPOG00000001739	SRRT	96	65.545	Cavia_porcellus
ENSOMEG00000003155	srrt	85	74.194	ENSCCAG00000015877	SRRT	96	65.581	Cebus_capucinus
ENSOMEG00000003155	srrt	90	74.459	ENSCATG00000036306	SRRT	96	65.854	Cercocebus_atys
ENSOMEG00000003155	srrt	96	64.933	ENSCLAG00000007568	SRRT	96	65.978	Chinchilla_lanigera
ENSOMEG00000003155	srrt	90	74.194	ENSCSAG00000017996	SRRT	96	65.505	Chlorocebus_sabaeus
ENSOMEG00000003155	srrt	56	74.815	ENSCHOG00000007815	SRRT	68	69.132	Choloepus_hoffmanni
ENSOMEG00000003155	srrt	95	53.826	ENSCPBG00000011553	SRRT	97	55.682	Chrysemys_picta_bellii
ENSOMEG00000003155	srrt	100	41.730	ENSCING00000003506	-	71	51.250	Ciona_intestinalis
ENSOMEG00000003155	srrt	95	48.703	ENSCSAVG00000008394	-	91	47.148	Ciona_savignyi
ENSOMEG00000003155	srrt	56	74.459	ENSCANG00000034556	SRRT	96	65.618	Colobus_angolensis_palliatus
ENSOMEG00000003155	srrt	96	64.028	ENSCGRG00001001594	Srrt	96	65.665	Cricetulus_griseus_chok1gshd
ENSOMEG00000003155	srrt	91	81.699	ENSCGRG00000007292	Srrt	89	70.450	Cricetulus_griseus_crigri
ENSOMEG00000003155	srrt	98	80.568	ENSCSEG00000017878	srrt	98	75.806	Cynoglossus_semilaevis
ENSOMEG00000003155	srrt	74	64.331	ENSCSEG00000005233	-	96	55.702	Cynoglossus_semilaevis
ENSOMEG00000003155	srrt	90	55.266	ENSCVAG00000017344	-	96	56.549	Cyprinodon_variegatus
ENSOMEG00000003155	srrt	92	89.831	ENSCVAG00000019848	srrt	98	86.030	Cyprinodon_variegatus
ENSOMEG00000003155	srrt	91	84.902	ENSDARG00000017762	srrt	98	74.886	Danio_rerio
ENSOMEG00000003155	srrt	85	74.194	ENSDNOG00000003851	SRRT	96	66.086	Dasypus_novemcinctus
ENSOMEG00000003155	srrt	96	64.019	ENSDORG00000005584	Srrt	96	65.513	Dipodomys_ordii
ENSOMEG00000003155	srrt	90	52.711	FBgn0033062	Ars2	68	53.219	Drosophila_melanogaster
ENSOMEG00000003155	srrt	80	71.459	ENSETEG00000016175	SRRT	71	72.903	Echinops_telfairi
ENSOMEG00000003155	srrt	76	56.340	ENSEBUG00000008517	-	88	56.160	Eptatretus_burgeri
ENSOMEG00000003155	srrt	96	63.753	ENSEASG00005016956	SRRT	96	65.457	Equus_asinus_asinus
ENSOMEG00000003155	srrt	96	63.753	ENSECAG00000012292	SRRT	96	66.125	Equus_caballus
ENSOMEG00000003155	srrt	81	77.083	ENSEEUG00000009117	SRRT	81	71.875	Erinaceus_europaeus
ENSOMEG00000003155	srrt	91	83.913	ENSELUG00000006651	srrt	96	72.292	Esox_lucius
ENSOMEG00000003155	srrt	83	68.590	ENSELUG00000021216	-	96	58.931	Esox_lucius
ENSOMEG00000003155	srrt	96	63.986	ENSFCAG00000006855	SRRT	96	65.738	Felis_catus
ENSOMEG00000003155	srrt	56	70.796	ENSFDAG00000021347	SRRT	96	64.085	Fukomys_damarensis
ENSOMEG00000003155	srrt	57	57.557	ENSFHEG00000004105	-	99	56.287	Fundulus_heteroclitus
ENSOMEG00000003155	srrt	95	77.124	ENSFHEG00000002756	srrt	93	88.278	Fundulus_heteroclitus
ENSOMEG00000003155	srrt	90	82.040	ENSGMOG00000018619	srrt	98	74.592	Gadus_morhua
ENSOMEG00000003155	srrt	85	66.063	ENSGMOG00000018694	-	91	66.370	Gadus_morhua
ENSOMEG00000003155	srrt	90	90.132	ENSGAFG00000005423	srrt	98	85.664	Gambusia_affinis
ENSOMEG00000003155	srrt	92	55.128	ENSGAFG00000020383	-	96	56.720	Gambusia_affinis
ENSOMEG00000003155	srrt	94	86.299	ENSGACG00000020387	srrt	98	82.448	Gasterosteus_aculeatus
ENSOMEG00000003155	srrt	86	62.201	ENSGACG00000001100	-	96	55.324	Gasterosteus_aculeatus
ENSOMEG00000003155	srrt	90	74.459	ENSGGOG00000001508	SRRT	96	65.814	Gorilla_gorilla
ENSOMEG00000003155	srrt	90	90.989	ENSHBUG00000002942	srrt	94	86.380	Haplochromis_burtoni
ENSOMEG00000003155	srrt	87	73.448	ENSHGLG00000008344	Srrt	96	66.204	Heterocephalus_glaber_female
ENSOMEG00000003155	srrt	87	74.242	ENSHGLG00100018857	Srrt	96	66.705	Heterocephalus_glaber_male
ENSOMEG00000003155	srrt	92	55.921	ENSHCOG00000008904	-	95	56.705	Hippocampus_comes
ENSOMEG00000003155	srrt	95	85.169	ENSHCOG00000005403	srrt	98	81.680	Hippocampus_comes
ENSOMEG00000003155	srrt	88	82.314	ENSIPUG00000021150	srrt	98	71.986	Ictalurus_punctatus
ENSOMEG00000003155	srrt	90	74.459	ENSSTOG00000013776	SRRT	96	65.549	Ictidomys_tridecemlineatus
ENSOMEG00000003155	srrt	96	65.064	ENSJJAG00000010446	Srrt	96	66.042	Jaculus_jaculus
ENSOMEG00000003155	srrt	82	64.718	ENSKMAG00000008468	-	96	56.264	Kryptolebias_marmoratus
ENSOMEG00000003155	srrt	92	89.744	ENSKMAG00000013599	srrt	98	83.699	Kryptolebias_marmoratus
ENSOMEG00000003155	srrt	98	82.572	ENSLBEG00000016308	srrt	98	82.091	Labrus_bergylta
ENSOMEG00000003155	srrt	56	65.789	ENSLBEG00000028983	-	98	51.962	Labrus_bergylta
ENSOMEG00000003155	srrt	95	56.066	ENSLACG00000001089	SRRT	98	58.894	Latimeria_chalumnae
ENSOMEG00000003155	srrt	81	83.228	ENSLOCG00000013658	srrt	78	86.275	Lepisosteus_oculatus
ENSOMEG00000003155	srrt	85	74.194	ENSLAFG00000007725	SRRT	96	64.740	Loxodonta_africana
ENSOMEG00000003155	srrt	90	74.459	ENSMFAG00000033745	SRRT	99	64.740	Macaca_fascicularis
ENSOMEG00000003155	srrt	90	74.194	ENSMMUG00000021255	SRRT	96	65.505	Macaca_mulatta
ENSOMEG00000003155	srrt	90	74.194	ENSMNEG00000041864	SRRT	96	65.854	Macaca_nemestrina
ENSOMEG00000003155	srrt	90	74.459	ENSMLEG00000029479	SRRT	98	64.740	Mandrillus_leucophaeus
ENSOMEG00000003155	srrt	91	90.132	ENSMAMG00000014311	srrt	98	85.548	Mastacembelus_armatus
ENSOMEG00000003155	srrt	84	66.738	ENSMAMG00000010681	-	87	67.316	Mastacembelus_armatus
ENSOMEG00000003155	srrt	83	65.458	ENSMZEG00005028002	-	96	56.632	Maylandia_zebra
ENSOMEG00000003155	srrt	90	91.209	ENSMZEG00005016135	srrt	94	86.729	Maylandia_zebra
ENSOMEG00000003155	srrt	96	63.520	ENSMAUG00000011386	Srrt	97	67.578	Mesocricetus_auratus
ENSOMEG00000003155	srrt	94	72.727	ENSMICG00000009471	SRRT	98	65.017	Microcebus_murinus
ENSOMEG00000003155	srrt	85	75.000	ENSMOCG00000001971	Srrt	96	65.358	Microtus_ochrogaster
ENSOMEG00000003155	srrt	95	82.368	ENSMMOG00000016399	srrt	98	81.595	Mola_mola
ENSOMEG00000003155	srrt	83	54.762	ENSMMOG00000011137	-	88	55.132	Mola_mola
ENSOMEG00000003155	srrt	56	70.299	ENSMODG00000004862	SRRT	94	68.293	Monodelphis_domestica
ENSOMEG00000003155	srrt	68	48.639	ENSMALG00000005567	-	100	49.273	Monopterus_albus
ENSOMEG00000003155	srrt	89	85.957	ENSMALG00000018604	srrt	99	78.339	Monopterus_albus
ENSOMEG00000003155	srrt	96	65.416	MGP_CAROLIEiJ_G0027870	Srrt	99	72.388	Mus_caroli
ENSOMEG00000003155	srrt	96	65.416	ENSMUSG00000037364	Srrt	99	72.388	Mus_musculus
ENSOMEG00000003155	srrt	96	65.299	MGP_PahariEiJ_G0024456	Srrt	99	72.388	Mus_pahari
ENSOMEG00000003155	srrt	96	65.416	MGP_SPRETEiJ_G0028875	Srrt	99	72.388	Mus_spretus
ENSOMEG00000003155	srrt	96	64.219	ENSMPUG00000015839	SRRT	96	65.398	Mustela_putorius_furo
ENSOMEG00000003155	srrt	90	73.978	ENSMLUG00000009975	SRRT	96	65.970	Myotis_lucifugus
ENSOMEG00000003155	srrt	90	74.194	ENSNGAG00000023715	Srrt	100	64.503	Nannospalax_galili
ENSOMEG00000003155	srrt	92	90.308	ENSNBRG00000019100	srrt	98	84.767	Neolamprologus_brichardi
ENSOMEG00000003155	srrt	82	65.714	ENSNLEG00000011987	SRRT	99	59.533	Nomascus_leucogenys
ENSOMEG00000003155	srrt	91	61.171	ENSMEUG00000011941	SRRT	96	53.801	Notamacropus_eugenii
ENSOMEG00000003155	srrt	66	74.242	ENSOPRG00000002502	-	67	78.788	Ochotona_princeps
ENSOMEG00000003155	srrt	87	75.385	ENSODEG00000016856	SRRT	97	68.056	Octodon_degus
ENSOMEG00000003155	srrt	90	91.209	ENSONIG00000004242	srrt	98	83.560	Oreochromis_niloticus
ENSOMEG00000003155	srrt	93	57.160	ENSONIG00000016080	-	95	57.341	Oreochromis_niloticus
ENSOMEG00000003155	srrt	100	96.560	ENSORLG00000008120	srrt	100	96.560	Oryzias_latipes
ENSOMEG00000003155	srrt	100	96.101	ENSORLG00020003058	srrt	100	96.101	Oryzias_latipes_hni
ENSOMEG00000003155	srrt	100	96.216	ENSORLG00015008062	srrt	100	96.216	Oryzias_latipes_hsok
ENSOMEG00000003155	srrt	85	74.569	ENSOGAG00000017242	SRRT	96	66.086	Otolemur_garnettii
ENSOMEG00000003155	srrt	90	74.026	ENSOARG00000015645	SRRT	96	65.278	Ovis_aries
ENSOMEG00000003155	srrt	93	70.675	ENSPPAG00000041090	SRRT	96	65.585	Pan_paniscus
ENSOMEG00000003155	srrt	96	63.967	ENSPPRG00000009557	SRRT	96	65.731	Panthera_pardus
ENSOMEG00000003155	srrt	96	63.986	ENSPTIG00000014355	SRRT	96	65.854	Panthera_tigris_altaica
ENSOMEG00000003155	srrt	56	74.459	ENSPTRG00000019511	SRRT	99	62.937	Pan_troglodytes
ENSOMEG00000003155	srrt	90	72.727	ENSPANG00000020763	SRRT	97	64.740	Papio_anubis
ENSOMEG00000003155	srrt	95	79.830	ENSPKIG00000005434	srrt	98	71.932	Paramormyrops_kingsleyae
ENSOMEG00000003155	srrt	88	79.736	ENSPKIG00000022212	-	98	69.284	Paramormyrops_kingsleyae
ENSOMEG00000003155	srrt	56	74.725	ENSPSIG00000016311	SRRT	98	65.358	Pelodiscus_sinensis
ENSOMEG00000003155	srrt	98	80.669	ENSPMGG00000002841	srrt	98	82.090	Periophthalmus_magnuspinnatus
ENSOMEG00000003155	srrt	89	75.604	ENSPEMG00000010834	Srrt	97	68.254	Peromyscus_maniculatus_bairdii
ENSOMEG00000003155	srrt	96	55.942	ENSPMAG00000009614	-	95	55.301	Petromyzon_marinus
ENSOMEG00000003155	srrt	89	71.949	ENSPCIG00000000816	SRRT	96	64.877	Phascolarctos_cinereus
ENSOMEG00000003155	srrt	92	55.470	ENSPFOG00000016554	-	96	56.328	Poecilia_formosa
ENSOMEG00000003155	srrt	95	85.203	ENSPFOG00000005704	srrt	98	86.030	Poecilia_formosa
ENSOMEG00000003155	srrt	90	89.278	ENSPLAG00000021992	srrt	98	83.295	Poecilia_latipinna
ENSOMEG00000003155	srrt	92	55.627	ENSPLAG00000004526	-	96	56.110	Poecilia_latipinna
ENSOMEG00000003155	srrt	89	54.642	ENSPMEG00000001520	-	95	55.556	Poecilia_mexicana
ENSOMEG00000003155	srrt	95	85.084	ENSPMEG00000001182	srrt	98	85.797	Poecilia_mexicana
ENSOMEG00000003155	srrt	95	85.203	ENSPREG00000022308	srrt	98	85.681	Poecilia_reticulata
ENSOMEG00000003155	srrt	56	56.494	ENSPPYG00000017432	SRRT	95	56.192	Pongo_abelii
ENSOMEG00000003155	srrt	87	72.093	ENSPCAG00000001621	SRRT	96	64.376	Procavia_capensis
ENSOMEG00000003155	srrt	56	74.459	ENSPCOG00000025751	SRRT	96	65.970	Propithecus_coquereli
ENSOMEG00000003155	srrt	68	66.237	ENSPVAG00000000834	SRRT	100	57.349	Pteropus_vampyrus
ENSOMEG00000003155	srrt	90	91.209	ENSPNYG00000018710	srrt	98	86.496	Pundamilia_nyererei
ENSOMEG00000003155	srrt	92	66.809	ENSPNAG00000010629	srrt	97	60.360	Pygocentrus_nattereri
ENSOMEG00000003155	srrt	56	65.066	ENSRNOG00000048277	AABR07035787.1	100	62.200	Rattus_norvegicus
ENSOMEG00000003155	srrt	90	74.194	ENSRBIG00000035718	SRRT	97	64.740	Rhinopithecus_bieti
ENSOMEG00000003155	srrt	90	74.194	ENSRROG00000030622	SRRT	98	64.740	Rhinopithecus_roxellana
ENSOMEG00000003155	srrt	85	74.194	ENSSBOG00000033570	SRRT	97	65.533	Saimiri_boliviensis_boliviensis
ENSOMEG00000003155	srrt	72	60.526	ENSSHAG00000007349	-	99	62.462	Sarcophilus_harrisii
ENSOMEG00000003155	srrt	88	84.547	ENSSFOG00015017293	srrt	98	73.973	Scleropages_formosus
ENSOMEG00000003155	srrt	89	91.886	ENSSMAG00000015342	srrt	98	85.548	Scophthalmus_maximus
ENSOMEG00000003155	srrt	56	62.712	ENSSMAG00000018195	-	95	56.366	Scophthalmus_maximus
ENSOMEG00000003155	srrt	57	55.864	ENSSDUG00000002051	-	93	56.681	Seriola_dumerili
ENSOMEG00000003155	srrt	91	92.291	ENSSDUG00000012049	srrt	89	92.291	Seriola_dumerili
ENSOMEG00000003155	srrt	95	83.730	ENSSLDG00000017477	srrt	98	84.268	Seriola_lalandi_dorsalis
ENSOMEG00000003155	srrt	75	64.951	ENSSPAG00000018943	-	93	58.568	Stegastes_partitus
ENSOMEG00000003155	srrt	90	91.266	ENSSPAG00000005665	srrt	96	86.443	Stegastes_partitus
ENSOMEG00000003155	srrt	81	73.661	ENSSSCG00000024789	SRRT	99	63.366	Sus_scrofa
ENSOMEG00000003155	srrt	93	87.229	ENSTRUG00000016075	srrt	98	81.640	Takifugu_rubripes
ENSOMEG00000003155	srrt	90	53.885	ENSTRUG00000000023	-	93	55.290	Takifugu_rubripes
ENSOMEG00000003155	srrt	67	86.170	ENSTNIG00000011779	srrt	100	76.198	Tetraodon_nigroviridis
ENSOMEG00000003155	srrt	86	62.055	ENSTNIG00000003111	-	95	54.054	Tetraodon_nigroviridis
ENSOMEG00000003155	srrt	64	76.596	ENSTBEG00000005212	SRRT	58	76.596	Tupaia_belangeri
ENSOMEG00000003155	srrt	95	74.194	ENSTTRG00000011104	SRRT	96	65.513	Tursiops_truncatus
ENSOMEG00000003155	srrt	87	74.194	ENSUAMG00000027997	SRRT	98	65.618	Ursus_americanus
ENSOMEG00000003155	srrt	96	63.986	ENSUMAG00000011295	SRRT	96	65.621	Ursus_maritimus
ENSOMEG00000003155	srrt	96	63.731	ENSVVUG00000023572	SRRT	96	65.621	Vulpes_vulpes
ENSOMEG00000003155	srrt	78	75.843	ENSXETG00000025124	srrt	98	55.290	Xenopus_tropicalis
ENSOMEG00000003155	srrt	58	53.404	ENSXCOG00000013105	-	91	54.725	Xiphophorus_couchianus
ENSOMEG00000003155	srrt	98	85.198	ENSXMAG00000007627	srrt	98	85.781	Xiphophorus_maculatus
ENSOMEG00000003155	srrt	92	55.499	ENSXMAG00000002090	-	96	56.489	Xiphophorus_maculatus