EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000003161 (Gene tree)
Gene ID: 112149470
Gene Symbol: rrp8
Alias: -
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 4500 bases
Position: chrNVQA01000013.1:18092722-18097221
Accession: 112149470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000023226	Methyltransf_8	PF05148.15	5.4e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000012826	-	2701	-	ENSOMEP00000023226	560 (aa)	XP_024132941	UPI000CF7CEFA

Gene Model

Click here to download ENSOMEG00000003161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000003161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000003161	rrp8	100	62.912	ENSAPOG00000010798	-	98	61.979	Acanthochromis_polyacanthus
ENSOMEG00000003161	rrp8	100	62.912	ENSAPOG00000010806	rrp8	98	61.979	Acanthochromis_polyacanthus
ENSOMEG00000003161	rrp8	100	62.912	ENSAPOG00000008509	-	100	61.979	Acanthochromis_polyacanthus
ENSOMEG00000003161	rrp8	94	56.546	ENSACIG00000019896	rrp8	99	57.333	Amphilophus_citrinellus
ENSOMEG00000003161	rrp8	100	62.218	ENSAOCG00000008785	rrp8	100	61.352	Amphiprion_ocellaris
ENSOMEG00000003161	rrp8	100	62.045	ENSAPEG00000008416	rrp8	100	61.179	Amphiprion_percula
ENSOMEG00000003161	rrp8	93	59.032	ENSATEG00000014110	rrp8	98	58.659	Anabas_testudineus
ENSOMEG00000003161	rrp8	100	59.541	ENSACLG00000002746	rrp8	100	58.865	Astatotilapia_calliptera
ENSOMEG00000003161	rrp8	100	45.760	ENSAMXG00000005164	rrp8	53	63.273	Astyanax_mexicanus
ENSOMEG00000003161	rrp8	77	39.261	ENSCSAVG00000006435	-	94	39.030	Ciona_savignyi
ENSOMEG00000003161	rrp8	71	60.349	ENSCSEG00000007330	rrp8	100	59.750	Cynoglossus_semilaevis
ENSOMEG00000003161	rrp8	100	55.614	ENSCVAG00000012032	rrp8	100	55.282	Cyprinodon_variegatus
ENSOMEG00000003161	rrp8	95	48.921	ENSDARG00000071652	rrp8	80	73.874	Danio_rerio
ENSOMEG00000003161	rrp8	100	46.066	ENSELUG00000008665	rrp8	100	47.145	Esox_lucius
ENSOMEG00000003161	rrp8	87	53.239	ENSGAFG00000012331	rrp8	99	52.834	Gambusia_affinis
ENSOMEG00000003161	rrp8	78	54.691	ENSGACG00000011343	rrp8	100	54.110	Gasterosteus_aculeatus
ENSOMEG00000003161	rrp8	100	59.717	ENSHBUG00000017131	rrp8	100	59.043	Haplochromis_burtoni
ENSOMEG00000003161	rrp8	100	50.780	ENSHCOG00000001293	rrp8	100	50.436	Hippocampus_comes
ENSOMEG00000003161	rrp8	100	43.471	ENSIPUG00000017733	rrp8	100	44.346	Ictalurus_punctatus
ENSOMEG00000003161	rrp8	61	46.556	ENSSTOG00000016272	RRP8	80	45.924	Ictidomys_tridecemlineatus
ENSOMEG00000003161	rrp8	100	60.281	ENSKMAG00000009229	rrp8	100	58.025	Kryptolebias_marmoratus
ENSOMEG00000003161	rrp8	69	60.614	ENSLBEG00000019937	rrp8	100	59.850	Labrus_bergylta
ENSOMEG00000003161	rrp8	50	48.772	ENSLOCG00000013776	-	71	59.887	Lepisosteus_oculatus
ENSOMEG00000003161	rrp8	100	45.724	ENSLOCG00000009591	rrp8	100	44.774	Lepisosteus_oculatus
ENSOMEG00000003161	rrp8	100	61.419	ENSMAMG00000009679	rrp8	100	60.900	Mastacembelus_armatus
ENSOMEG00000003161	rrp8	100	59.541	ENSMZEG00005008926	rrp8	100	58.865	Maylandia_zebra
ENSOMEG00000003161	rrp8	94	55.263	ENSMMOG00000015709	rrp8	99	55.722	Mola_mola
ENSOMEG00000003161	rrp8	100	58.783	ENSMALG00000015984	rrp8	100	58.087	Monopterus_albus
ENSOMEG00000003161	rrp8	61	47.107	MGP_SPRETEiJ_G0031348	Rrp8	77	46.240	Mus_spretus
ENSOMEG00000003161	rrp8	74	61.137	ENSNBRG00000023416	rrp8	76	85.714	Neolamprologus_brichardi
ENSOMEG00000003161	rrp8	59	60.889	ENSNLEG00000017445	RRP8	50	60.889	Nomascus_leucogenys
ENSOMEG00000003161	rrp8	74	53.828	ENSONIG00000016861	rrp8	96	52.885	Oreochromis_niloticus
ENSOMEG00000003161	rrp8	100	79.359	ENSORLG00000004175	rrp8	99	79.181	Oryzias_latipes
ENSOMEG00000003161	rrp8	100	79.715	ENSORLG00020011413	rrp8	99	80.071	Oryzias_latipes_hni
ENSOMEG00000003161	rrp8	100	80.605	ENSORLG00015015410	rrp8	99	80.427	Oryzias_latipes_hsok
ENSOMEG00000003161	rrp8	100	48.097	ENSPKIG00000024217	rrp8	100	46.678	Paramormyrops_kingsleyae
ENSOMEG00000003161	rrp8	100	54.657	ENSPFOG00000007308	rrp8	100	54.466	Poecilia_formosa
ENSOMEG00000003161	rrp8	100	55.379	ENSPLAG00000011349	rrp8	100	54.833	Poecilia_latipinna
ENSOMEG00000003161	rrp8	100	54.930	ENSPMEG00000009888	rrp8	100	54.816	Poecilia_mexicana
ENSOMEG00000003161	rrp8	87	51.807	ENSPREG00000008450	rrp8	99	52.104	Poecilia_reticulata
ENSOMEG00000003161	rrp8	100	59.155	ENSPNYG00000002878	rrp8	100	58.511	Pundamilia_nyererei
ENSOMEG00000003161	rrp8	100	45.704	ENSPNAG00000024779	rrp8	100	45.660	Pygocentrus_nattereri
ENSOMEG00000003161	rrp8	100	46.978	ENSSFOG00015003917	rrp8	99	46.632	Scleropages_formosus
ENSOMEG00000003161	rrp8	100	60.771	ENSSMAG00000004859	rrp8	100	60.563	Scophthalmus_maximus
ENSOMEG00000003161	rrp8	100	61.130	ENSSDUG00000010477	rrp8	100	60.616	Seriola_dumerili
ENSOMEG00000003161	rrp8	100	61.140	ENSSLDG00000000521	rrp8	100	60.967	Seriola_lalandi_dorsalis
ENSOMEG00000003161	rrp8	69	64.428	ENSSPAG00000006664	rrp8	79	85.849	Stegastes_partitus
ENSOMEG00000003161	rrp8	100	56.918	ENSTRUG00000021812	rrp8	100	56.217	Takifugu_rubripes
ENSOMEG00000003161	rrp8	71	57.000	ENSXCOG00000006156	rrp8	100	57.000	Xiphophorus_couchianus
ENSOMEG00000003161	rrp8	100	54.657	ENSXMAG00000005011	rrp8	100	55.142	Xiphophorus_maculatus