EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000003193 (Gene tree)
Gene ID: 112155493
Gene Symbol: ssb
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 7193 bases
Position: chrNVQA01000019.1:10287184-10294376
Accession: 112155493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000002263	RRM_1	PF00076.22	1.1e-11	1	1
ENSOMEP00000002263	RRM_3	PF08777.11	1.2e-29	1	1
ENSOMEP00000002263	La	PF05383.17	1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000012784	-	3297	-	ENSOMEP00000002263	399 (aa)	XP_024142914	UPI000CF83887

Gene Model

Click here to download ENSOMEG00000003193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000003193's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000003193	ssb	100	58.578	ENSG00000138385	SSB	98	66.949	Homo_sapiens
ENSOMEG00000003193	ssb	100	83.250	ENSAPOG00000003448	ssb	100	83.000	Acanthochromis_polyacanthus
ENSOMEG00000003193	ssb	100	55.370	ENSAMEG00000010507	SSB	98	55.181	Ailuropoda_melanoleuca
ENSOMEG00000003193	ssb	93	79.570	ENSACIG00000001738	ssb	95	80.874	Amphilophus_citrinellus
ENSOMEG00000003193	ssb	100	82.750	ENSAOCG00000020398	ssb	100	83.000	Amphiprion_ocellaris
ENSOMEG00000003193	ssb	100	83.250	ENSAPEG00000020395	ssb	100	83.500	Amphiprion_percula
ENSOMEG00000003193	ssb	100	84.289	ENSATEG00000016884	ssb	100	85.037	Anabas_testudineus
ENSOMEG00000003193	ssb	100	55.687	ENSAPLG00000006109	SSB	99	55.450	Anas_platyrhynchos
ENSOMEG00000003193	ssb	100	55.366	ENSACAG00000017008	SSB	99	55.366	Anolis_carolinensis
ENSOMEG00000003193	ssb	100	51.605	ENSANAG00000027195	-	98	51.122	Aotus_nancymaae
ENSOMEG00000003193	ssb	100	75.062	ENSACLG00000010798	ssb	100	76.309	Astatotilapia_calliptera
ENSOMEG00000003193	ssb	100	62.347	ENSAMXG00000012606	ssb	100	63.325	Astyanax_mexicanus
ENSOMEG00000003193	ssb	100	59.158	ENSBTAG00000008716	SSB	98	58.250	Bos_taurus
ENSOMEG00000003193	ssb	75	34.641	WBGene00016653	C44E4.4	76	35.621	Caenorhabditis_elegans
ENSOMEG00000003193	ssb	100	58.765	ENSCJAG00000045073	SSB	98	57.855	Callithrix_jacchus
ENSOMEG00000003193	ssb	100	57.882	ENSCAFG00000012418	SSB	98	56.965	Canis_familiaris
ENSOMEG00000003193	ssb	100	57.882	ENSCAFG00020002900	SSB	98	56.965	Canis_lupus_dingo
ENSOMEG00000003193	ssb	100	54.815	ENSCHIG00000022196	-	81	60.185	Capra_hircus
ENSOMEG00000003193	ssb	100	59.012	ENSCHIG00000022624	-	98	58.105	Capra_hircus
ENSOMEG00000003193	ssb	99	58.416	ENSTSYG00000000097	SSB	98	57.500	Carlito_syrichta
ENSOMEG00000003193	ssb	100	59.012	ENSCPOG00000003338	SSB	98	58.105	Cavia_porcellus
ENSOMEG00000003193	ssb	100	59.259	ENSCCAG00000035147	SSB	98	58.354	Cebus_capucinus
ENSOMEG00000003193	ssb	72	56.897	ENSCATG00000036701	SSB	83	55.862	Cercocebus_atys
ENSOMEG00000003193	ssb	99	43.500	ENSCATG00000042909	-	98	42.643	Cercocebus_atys
ENSOMEG00000003193	ssb	100	58.272	ENSCLAG00000015617	-	98	57.357	Chinchilla_lanigera
ENSOMEG00000003193	ssb	97	54.359	ENSCSAG00000018390	-	98	51.786	Chlorocebus_sabaeus
ENSOMEG00000003193	ssb	100	59.012	ENSCSAG00000015200	SSB	88	58.272	Chlorocebus_sabaeus
ENSOMEG00000003193	ssb	100	59.012	ENSCHOG00000007763	SSB	98	58.105	Choloepus_hoffmanni
ENSOMEG00000003193	ssb	100	60.636	ENSCPBG00000006519	SSB	99	59.902	Chrysemys_picta_bellii
ENSOMEG00000003193	ssb	100	52.099	ENSCANG00000033240	-	98	50.000	Colobus_angolensis_palliatus
ENSOMEG00000003193	ssb	95	46.053	ENSCANG00000028838	-	91	44.819	Colobus_angolensis_palliatus
ENSOMEG00000003193	ssb	100	59.012	ENSCANG00000027695	SSB	98	58.105	Colobus_angolensis_palliatus
ENSOMEG00000003193	ssb	100	53.071	ENSCGRG00001024831	Ssb	98	52.854	Cricetulus_griseus_chok1gshd
ENSOMEG00000003193	ssb	100	53.071	ENSCGRG00000005387	Ssb	98	52.854	Cricetulus_griseus_crigri
ENSOMEG00000003193	ssb	100	81.000	ENSCSEG00000011599	ssb	100	81.000	Cynoglossus_semilaevis
ENSOMEG00000003193	ssb	100	79.851	ENSCVAG00000021558	ssb	100	79.602	Cyprinodon_variegatus
ENSOMEG00000003193	ssb	100	62.129	ENSDARG00000029252	ssb	100	62.162	Danio_rerio
ENSOMEG00000003193	ssb	100	59.012	ENSDNOG00000013450	SSB	98	58.105	Dasypus_novemcinctus
ENSOMEG00000003193	ssb	100	52.941	ENSDORG00000005543	Ssb	98	52.475	Dipodomys_ordii
ENSOMEG00000003193	ssb	84	35.493	FBgn0011638	La	78	36.957	Drosophila_melanogaster
ENSOMEG00000003193	ssb	51	60.396	ENSETEG00000004614	-	52	60.396	Echinops_telfairi
ENSOMEG00000003193	ssb	99	45.063	ENSEBUG00000001237	ssb	97	45.063	Eptatretus_burgeri
ENSOMEG00000003193	ssb	100	59.012	ENSEASG00005022835	SSB	98	58.105	Equus_asinus_asinus
ENSOMEG00000003193	ssb	100	59.012	ENSECAG00000018495	SSB	98	58.105	Equus_caballus
ENSOMEG00000003193	ssb	76	49.351	ENSEEUG00000008077	SSB	77	49.013	Erinaceus_europaeus
ENSOMEG00000003193	ssb	100	68.486	ENSELUG00000020929	ssb	100	68.238	Esox_lucius
ENSOMEG00000003193	ssb	100	58.867	ENSFCAG00000011601	SSB	98	57.960	Felis_catus
ENSOMEG00000003193	ssb	99	58.128	ENSFALG00000000930	SSB	99	57.635	Ficedula_albicollis
ENSOMEG00000003193	ssb	100	58.765	ENSFDAG00000000598	SSB	98	57.855	Fukomys_damarensis
ENSOMEG00000003193	ssb	74	79.402	ENSFHEG00000003268	ssb	93	79.402	Fundulus_heteroclitus
ENSOMEG00000003193	ssb	99	72.953	ENSGMOG00000002664	ssb	100	72.208	Gadus_morhua
ENSOMEG00000003193	ssb	99	59.214	ENSGALG00000009677	SSB	99	56.757	Gallus_gallus
ENSOMEG00000003193	ssb	100	81.886	ENSGAFG00000002749	ssb	100	82.134	Gambusia_affinis
ENSOMEG00000003193	ssb	100	78.133	ENSGACG00000005107	ssb	100	76.904	Gasterosteus_aculeatus
ENSOMEG00000003193	ssb	100	60.147	ENSGAGG00000007807	SSB	99	59.413	Gopherus_agassizii
ENSOMEG00000003193	ssb	100	49.877	ENSGGOG00000024891	-	99	49.136	Gorilla_gorilla
ENSOMEG00000003193	ssb	54	55.909	ENSGGOG00000023471	-	89	53.636	Gorilla_gorilla
ENSOMEG00000003193	ssb	100	75.062	ENSHBUG00000006584	ssb	100	76.309	Haplochromis_burtoni
ENSOMEG00000003193	ssb	100	57.178	ENSHGLG00000017580	-	98	56.511	Heterocephalus_glaber_female
ENSOMEG00000003193	ssb	100	52.854	ENSHGLG00000005832	-	98	51.880	Heterocephalus_glaber_female
ENSOMEG00000003193	ssb	99	52.618	ENSHGLG00000004478	-	98	52.239	Heterocephalus_glaber_female
ENSOMEG00000003193	ssb	100	57.178	ENSHGLG00100003084	-	98	56.511	Heterocephalus_glaber_male
ENSOMEG00000003193	ssb	100	52.357	ENSHGLG00100008767	-	98	51.128	Heterocephalus_glaber_male
ENSOMEG00000003193	ssb	99	77.975	ENSHCOG00000019011	ssb	99	77.975	Hippocampus_comes
ENSOMEG00000003193	ssb	100	63.325	ENSIPUG00000003681	SSB	100	62.864	Ictalurus_punctatus
ENSOMEG00000003193	ssb	100	58.272	ENSSTOG00000008416	SSB	98	57.357	Ictidomys_tridecemlineatus
ENSOMEG00000003193	ssb	89	48.324	ENSJJAG00000016250	-	94	46.927	Jaculus_jaculus
ENSOMEG00000003193	ssb	100	51.781	ENSJJAG00000023158	-	99	51.544	Jaculus_jaculus
ENSOMEG00000003193	ssb	100	82.294	ENSKMAG00000017317	ssb	100	83.042	Kryptolebias_marmoratus
ENSOMEG00000003193	ssb	100	83.000	ENSLBEG00000017345	ssb	100	82.500	Labrus_bergylta
ENSOMEG00000003193	ssb	100	54.657	ENSLACG00000014056	SSB	99	54.902	Latimeria_chalumnae
ENSOMEG00000003193	ssb	99	66.915	ENSLOCG00000007933	ssb	99	66.915	Lepisosteus_oculatus
ENSOMEG00000003193	ssb	100	54.394	ENSLAFG00000000867	-	99	54.632	Loxodonta_africana
ENSOMEG00000003193	ssb	100	50.743	ENSLAFG00000028909	-	99	50.000	Loxodonta_africana
ENSOMEG00000003193	ssb	75	43.813	ENSLAFG00000026721	-	98	43.813	Loxodonta_africana
ENSOMEG00000003193	ssb	89	51.111	ENSMFAG00000041478	-	89	53.086	Macaca_fascicularis
ENSOMEG00000003193	ssb	100	59.012	ENSMFAG00000039066	SSB	98	58.105	Macaca_fascicularis
ENSOMEG00000003193	ssb	100	59.012	ENSMMUG00000023051	SSB	98	58.105	Macaca_mulatta
ENSOMEG00000003193	ssb	100	50.493	ENSMMUG00000011724	-	96	48.379	Macaca_mulatta
ENSOMEG00000003193	ssb	99	42.750	ENSMMUG00000039889	-	98	41.895	Macaca_mulatta
ENSOMEG00000003193	ssb	89	51.111	ENSMNEG00000034698	-	89	53.086	Macaca_nemestrina
ENSOMEG00000003193	ssb	100	50.367	ENSMNEG00000028321	SSB	98	49.383	Macaca_nemestrina
ENSOMEG00000003193	ssb	100	59.012	ENSMLEG00000035717	SSB	98	58.105	Mandrillus_leucophaeus
ENSOMEG00000003193	ssb	100	42.469	ENSMLEG00000042644	-	78	44.136	Mandrillus_leucophaeus
ENSOMEG00000003193	ssb	100	83.042	ENSMAMG00000004800	ssb	100	84.040	Mastacembelus_armatus
ENSOMEG00000003193	ssb	100	75.062	ENSMZEG00005005749	ssb	100	76.309	Maylandia_zebra
ENSOMEG00000003193	ssb	99	58.722	ENSMGAG00000010328	SSB	100	62.319	Meleagris_gallopavo
ENSOMEG00000003193	ssb	100	59.012	ENSMICG00000028252	-	98	58.105	Microcebus_murinus
ENSOMEG00000003193	ssb	98	52.658	ENSMICG00000033304	-	91	55.647	Microcebus_murinus
ENSOMEG00000003193	ssb	100	42.222	ENSMODG00000019271	-	99	42.222	Monodelphis_domestica
ENSOMEG00000003193	ssb	91	54.494	ENSMODG00000007027	-	99	47.654	Monodelphis_domestica
ENSOMEG00000003193	ssb	100	55.583	ENSMODG00000008227	-	99	55.097	Monodelphis_domestica
ENSOMEG00000003193	ssb	91	82.692	ENSMALG00000008045	ssb	88	82.514	Monopterus_albus
ENSOMEG00000003193	ssb	100	53.444	MGP_CAROLIEiJ_G0023629	-	96	61.842	Mus_caroli
ENSOMEG00000003193	ssb	100	53.222	ENSMUSG00000068882	Ssb	96	61.842	Mus_musculus
ENSOMEG00000003193	ssb	100	53.110	MGP_PahariEiJ_G0025081	-	96	61.184	Mus_pahari
ENSOMEG00000003193	ssb	100	53.222	MGP_SPRETEiJ_G0024551	Ssb	96	61.842	Mus_spretus
ENSOMEG00000003193	ssb	100	58.519	ENSMPUG00000000785	SSB	98	57.606	Mustela_putorius_furo
ENSOMEG00000003193	ssb	100	56.971	ENSMLUG00000016316	SSB	99	56.250	Myotis_lucifugus
ENSOMEG00000003193	ssb	100	74.564	ENSNBRG00000012661	ssb	100	75.810	Neolamprologus_brichardi
ENSOMEG00000003193	ssb	100	42.365	ENSNLEG00000028754	-	76	47.531	Nomascus_leucogenys
ENSOMEG00000003193	ssb	100	58.765	ENSNLEG00000004958	SSB	98	57.855	Nomascus_leucogenys
ENSOMEG00000003193	ssb	62	62.400	ENSMEUG00000001650	-	100	62.400	Notamacropus_eugenii
ENSOMEG00000003193	ssb	51	59.236	ENSOPRG00000008475	-	54	59.236	Ochotona_princeps
ENSOMEG00000003193	ssb	94	56.000	ENSODEG00000004202	-	99	55.467	Octodon_degus
ENSOMEG00000003193	ssb	100	76.060	ENSONIG00000008776	ssb	100	77.057	Oreochromis_niloticus
ENSOMEG00000003193	ssb	100	57.778	ENSOANG00000008543	SSB	99	57.531	Ornithorhynchus_anatinus
ENSOMEG00000003193	ssb	100	58.272	ENSOCUG00000010396	SSB	99	57.778	Oryctolagus_cuniculus
ENSOMEG00000003193	ssb	100	87.531	ENSORLG00000017208	ssb	100	86.035	Oryzias_latipes
ENSOMEG00000003193	ssb	100	87.282	ENSORLG00020022574	ssb	100	86.284	Oryzias_latipes_hni
ENSOMEG00000003193	ssb	100	88.529	ENSORLG00015016592	ssb	100	86.284	Oryzias_latipes_hsok
ENSOMEG00000003193	ssb	100	54.976	ENSOGAG00000029768	SSB	98	54.197	Otolemur_garnettii
ENSOMEG00000003193	ssb	100	59.012	ENSOARG00000002906	SSB	98	58.105	Ovis_aries
ENSOMEG00000003193	ssb	87	50.430	ENSPPAG00000006189	-	89	48.424	Pan_paniscus
ENSOMEG00000003193	ssb	100	50.370	ENSPPAG00000032427	-	96	59.677	Pan_paniscus
ENSOMEG00000003193	ssb	100	58.578	ENSPPAG00000042673	SSB	98	57.178	Pan_paniscus
ENSOMEG00000003193	ssb	100	58.867	ENSPPRG00000006599	SSB	98	57.960	Panthera_pardus
ENSOMEG00000003193	ssb	100	58.867	ENSPTIG00000011021	SSB	96	57.960	Panthera_tigris_altaica
ENSOMEG00000003193	ssb	100	58.578	ENSPTRG00000012620	SSB	98	57.178	Pan_troglodytes
ENSOMEG00000003193	ssb	100	48.642	ENSPTRG00000042880	-	99	47.901	Pan_troglodytes
ENSOMEG00000003193	ssb	97	41.795	ENSPANG00000031877	-	74	43.038	Papio_anubis
ENSOMEG00000003193	ssb	100	59.012	ENSPANG00000007440	SSB	98	58.105	Papio_anubis
ENSOMEG00000003193	ssb	99	42.000	ENSPANG00000034126	-	98	41.397	Papio_anubis
ENSOMEG00000003193	ssb	100	67.246	ENSPKIG00000019325	ssb	99	66.998	Paramormyrops_kingsleyae
ENSOMEG00000003193	ssb	100	61.125	ENSPSIG00000002265	SSB	93	60.880	Pelodiscus_sinensis
ENSOMEG00000003193	ssb	88	69.859	ENSPMGG00000020075	ssb	90	70.029	Periophthalmus_magnuspinnatus
ENSOMEG00000003193	ssb	89	46.537	ENSPMAG00000002982	ssb	84	46.556	Petromyzon_marinus
ENSOMEG00000003193	ssb	95	58.854	ENSPCIG00000028591	-	99	58.272	Phascolarctos_cinereus
ENSOMEG00000003193	ssb	100	82.793	ENSPFOG00000009650	ssb	100	82.793	Poecilia_formosa
ENSOMEG00000003193	ssb	100	82.544	ENSPLAG00000020498	ssb	100	82.544	Poecilia_latipinna
ENSOMEG00000003193	ssb	100	82.045	ENSPMEG00000001051	ssb	100	82.045	Poecilia_mexicana
ENSOMEG00000003193	ssb	93	83.155	ENSPREG00000003708	ssb	96	83.651	Poecilia_reticulata
ENSOMEG00000003193	ssb	100	58.765	ENSPPYG00000012919	SSB	98	57.855	Pongo_abelii
ENSOMEG00000003193	ssb	95	56.397	ENSPCAG00000010276	SSB	99	56.397	Procavia_capensis
ENSOMEG00000003193	ssb	100	57.284	ENSPCOG00000015741	-	98	56.359	Propithecus_coquereli
ENSOMEG00000003193	ssb	100	52.346	ENSPCOG00000023189	-	98	51.372	Propithecus_coquereli
ENSOMEG00000003193	ssb	89	60.393	ENSPVAG00000006615	SSB	86	63.072	Pteropus_vampyrus
ENSOMEG00000003193	ssb	100	75.312	ENSPNYG00000006444	ssb	100	76.559	Pundamilia_nyererei
ENSOMEG00000003193	ssb	100	62.500	ENSPNAG00000011708	ssb	100	62.774	Pygocentrus_nattereri
ENSOMEG00000003193	ssb	99	52.369	ENSRNOG00000011606	AABR07061825.1	98	52.120	Rattus_norvegicus
ENSOMEG00000003193	ssb	100	52.153	ENSRNOG00000007998	Ssb	98	50.966	Rattus_norvegicus
ENSOMEG00000003193	ssb	94	50.265	ENSRBIG00000041232	-	98	49.206	Rhinopithecus_bieti
ENSOMEG00000003193	ssb	87	55.014	ENSRBIG00000041608	-	94	52.722	Rhinopithecus_bieti
ENSOMEG00000003193	ssb	100	50.367	ENSRBIG00000041972	SSB	85	63.964	Rhinopithecus_bieti
ENSOMEG00000003193	ssb	99	41.646	ENSRBIG00000029918	-	98	41.045	Rhinopithecus_bieti
ENSOMEG00000003193	ssb	100	59.012	ENSRROG00000040346	SSB	98	58.105	Rhinopithecus_roxellana
ENSOMEG00000003193	ssb	87	57.593	ENSRROG00000034102	-	96	52.273	Rhinopithecus_roxellana
ENSOMEG00000003193	ssb	98	51.010	ENSRROG00000031684	-	99	49.367	Rhinopithecus_roxellana
ENSOMEG00000003193	ssb	99	47.132	ENSRROG00000007149	-	98	46.269	Rhinopithecus_roxellana
ENSOMEG00000003193	ssb	100	59.012	ENSSBOG00000027204	SSB	98	58.105	Saimiri_boliviensis_boliviensis
ENSOMEG00000003193	ssb	100	57.531	ENSSHAG00000018062	SSB	99	58.025	Sarcophilus_harrisii
ENSOMEG00000003193	ssb	100	68.069	ENSSFOG00015000550	ssb	99	68.069	Scleropages_formosus
ENSOMEG00000003193	ssb	100	78.697	ENSSMAG00000013885	ssb	98	82.834	Scophthalmus_maximus
ENSOMEG00000003193	ssb	100	85.786	ENSSDUG00000020117	ssb	100	85.536	Seriola_dumerili
ENSOMEG00000003193	ssb	100	82.250	ENSSLDG00000002525	ssb	100	81.250	Seriola_lalandi_dorsalis
ENSOMEG00000003193	ssb	95	54.047	ENSSARG00000007747	SSB	99	53.003	Sorex_araneus
ENSOMEG00000003193	ssb	100	59.951	ENSSPUG00000012112	SSB	99	59.069	Sphenodon_punctatus
ENSOMEG00000003193	ssb	100	83.000	ENSSPAG00000005696	ssb	100	83.750	Stegastes_partitus
ENSOMEG00000003193	ssb	94	54.856	ENSSSCG00000015938	SSB	90	54.945	Sus_scrofa
ENSOMEG00000003193	ssb	95	58.763	ENSTGUG00000007942	SSB	99	57.843	Taeniopygia_guttata
ENSOMEG00000003193	ssb	100	82.250	ENSTRUG00000017839	ssb	100	82.500	Takifugu_rubripes
ENSOMEG00000003193	ssb	91	78.261	ENSTNIG00000000915	ssb	100	77.049	Tetraodon_nigroviridis
ENSOMEG00000003193	ssb	82	64.348	ENSTBEG00000009056	SSB	80	63.964	Tupaia_belangeri
ENSOMEG00000003193	ssb	100	58.867	ENSTTRG00000002152	SSB	98	57.960	Tursiops_truncatus
ENSOMEG00000003193	ssb	94	58.995	ENSUAMG00000027833	SSB	95	58.630	Ursus_americanus
ENSOMEG00000003193	ssb	100	57.635	ENSUMAG00000013907	SSB	98	56.716	Ursus_maritimus
ENSOMEG00000003193	ssb	100	59.057	ENSVPAG00000007183	SSB	98	58.145	Vicugna_pacos
ENSOMEG00000003193	ssb	100	57.882	ENSVVUG00000016573	SSB	76	56.965	Vulpes_vulpes
ENSOMEG00000003193	ssb	99	52.693	ENSXETG00000025402	ssb	99	52.225	Xenopus_tropicalis
ENSOMEG00000003193	ssb	93	77.540	ENSXCOG00000019109	ssb	93	81.746	Xiphophorus_couchianus
ENSOMEG00000003193	ssb	100	79.653	ENSXMAG00000004888	ssb	100	79.404	Xiphophorus_maculatus