EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000003259 (Gene tree)
Gene ID
112143334
Gene Symbol
atxn1b
Alias
-
Full Name
ataxin-1-like
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Minus strand
Length
10868 bases
Position
chrNVQA01000006.1:9765737-9776604
Accession
112143334
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000023253AXHPF08517.124.7e-4111
ENSOMEP00000023260AXHPF08517.124.7e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000012692-3442-ENSOMEP00000023253823 (aa)XP_024122985UPI000CF82BD3
ENSOMET00000012684-3221-ENSOMEP00000023260823 (aa)XP_024122985UPI000CF82BD3
Gene Model
Click here to download ENSOMEG00000003259's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000003259's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000003259atxn1b9938.266ENSOMEG00000012883atxn1a9838.605
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000003259atxn1b9937.171ENSG00000124788ATXN19937.514Homo_sapiens
ENSOMEG00000003259atxn1b9941.243ENSAPOG00000018662atxn1a9941.818Acanthochromis_polyacanthus
ENSOMEG00000003259atxn1b10082.126ENSAPOG00000005003atxn1b10082.246Acanthochromis_polyacanthus
ENSOMEG00000003259atxn1b9938.677ENSAMEG00000004299ATXN19938.876Ailuropoda_melanoleuca
ENSOMEG00000003259atxn1b8382.759ENSACIG00000016088atxn1a9982.759Amphilophus_citrinellus
ENSOMEG00000003259atxn1b10070.254ENSACIG00000014661atxn1b10070.738Amphilophus_citrinellus
ENSOMEG00000003259atxn1b10081.840ENSAOCG00000019715atxn1b10081.961Amphiprion_ocellaris
ENSOMEG00000003259atxn1b9941.023ENSAOCG00000015796atxn1a9941.250Amphiprion_ocellaris
ENSOMEG00000003259atxn1b9941.049ENSAPEG00000011313atxn1a9940.904Amphiprion_percula
ENSOMEG00000003259atxn1b10081.840ENSAPEG00000022436atxn1b10081.961Amphiprion_percula
ENSOMEG00000003259atxn1b10079.207ENSATEG00000002982atxn1b10079.207Anabas_testudineus
ENSOMEG00000003259atxn1b9940.163ENSATEG00000013601atxn1a9940.394Anabas_testudineus
ENSOMEG00000003259atxn1b9938.041ENSACAG00000003919ATXN19937.373Anolis_carolinensis
ENSOMEG00000003259atxn1b7636.429ENSANAG00000025424-9636.872Aotus_nancymaae
ENSOMEG00000003259atxn1b9838.350ENSANAG00000025206-9538.814Aotus_nancymaae
ENSOMEG00000003259atxn1b10079.376ENSACLG00000005697atxn1b10079.496Astatotilapia_calliptera
ENSOMEG00000003259atxn1b9939.612ENSACLG00000015429atxn1a9939.816Astatotilapia_calliptera
ENSOMEG00000003259atxn1b9841.950ENSAMXG00000017432atxn1b9842.134Astyanax_mexicanus
ENSOMEG00000003259atxn1b9941.204ENSAMXG00000042368atxn1a9943.135Astyanax_mexicanus
ENSOMEG00000003259atxn1b9937.874ENSBTAG00000019675ATXN19939.000Bos_taurus
ENSOMEG00000003259atxn1b9838.350ENSCJAG00000006563ATXN19338.814Callithrix_jacchus
ENSOMEG00000003259atxn1b9938.907ENSCAFG00000009934ATXN19939.330Canis_familiaris
ENSOMEG00000003259atxn1b9838.796ENSCAFG00020012647ATXN19539.218Canis_lupus_dingo
ENSOMEG00000003259atxn1b9937.904ENSCHIG00000018697ATXN19938.771Capra_hircus
ENSOMEG00000003259atxn1b5152.313ENSTSYG00000000858ATXN19945.789Carlito_syrichta
ENSOMEG00000003259atxn1b9938.556ENSCAPG00000013095ATXN19939.000Cavia_aperea
ENSOMEG00000003259atxn1b9938.901ENSCPOG00000022869ATXN19939.350Cavia_porcellus
ENSOMEG00000003259atxn1b9938.573ENSCCAG00000018590ATXN19938.926Cebus_capucinus
ENSOMEG00000003259atxn1b9937.793ENSCATG00000042777ATXN19938.324Cercocebus_atys
ENSOMEG00000003259atxn1b9939.126ENSCLAG00000002212ATXN19939.775Chinchilla_lanigera
ENSOMEG00000003259atxn1b9937.877ENSCSAG00000007589ATXN19938.410Chlorocebus_sabaeus
ENSOMEG00000003259atxn1b9938.901ENSCPBG00000022373ATXN19939.282Chrysemys_picta_bellii
ENSOMEG00000003259atxn1b9937.935ENSCANG00000033673ATXN19938.470Colobus_angolensis_palliatus
ENSOMEG00000003259atxn1b9938.004ENSCGRG00001022108Atxn19938.652Cricetulus_griseus_chok1gshd
ENSOMEG00000003259atxn1b9938.348ENSCGRG00000014084Atxn19939.002Cricetulus_griseus_crigri
ENSOMEG00000003259atxn1b9937.165ENSCSEG00000017647atxn1a9938.932Cynoglossus_semilaevis
ENSOMEG00000003259atxn1b10072.859ENSCSEG00000004666atxn1b10072.859Cynoglossus_semilaevis
ENSOMEG00000003259atxn1b10078.365ENSCVAG00000010945atxn1b10078.365Cyprinodon_variegatus
ENSOMEG00000003259atxn1b9939.721ENSCVAG00000023240atxn1a9938.636Cyprinodon_variegatus
ENSOMEG00000003259atxn1b9939.728ENSDARG00000061687atxn1a9942.546Danio_rerio
ENSOMEG00000003259atxn1b9942.441ENSDARG00000060862atxn1b9941.889Danio_rerio
ENSOMEG00000003259atxn1b5845.214ENSDNOG00000048471ATXN19145.418Dasypus_novemcinctus
ENSOMEG00000003259atxn1b9937.070ENSDORG00000005940Atxn19937.486Dipodomys_ordii
ENSOMEG00000003259atxn1b8242.029ENSETEG00000003815ATXN18743.721Echinops_telfairi
ENSOMEG00000003259atxn1b9939.198ENSEASG00005011799ATXN19939.509Equus_asinus_asinus
ENSOMEG00000003259atxn1b9939.087ENSECAG00000009251ATXN19939.574Equus_caballus
ENSOMEG00000003259atxn1b9939.043ENSEEUG00000007120ATXN19939.068Erinaceus_europaeus
ENSOMEG00000003259atxn1b8768.750ENSELUG00000001311atxn1b7468.750Esox_lucius
ENSOMEG00000003259atxn1b9837.209ENSELUG00000003691atxn1a9637.652Esox_lucius
ENSOMEG00000003259atxn1b9938.295ENSFCAG00000011298ATXN19938.497Felis_catus
ENSOMEG00000003259atxn1b9939.145ENSFALG00000013400ATXN19939.572Ficedula_albicollis
ENSOMEG00000003259atxn1b8944.372ENSFDAG00000020905ATXN19937.426Fukomys_damarensis
ENSOMEG00000003259atxn1b9938.470ENSFHEG00000019419atxn1a9938.052Fundulus_heteroclitus
ENSOMEG00000003259atxn1b10077.404ENSFHEG00000017226atxn1b10077.284Fundulus_heteroclitus
ENSOMEG00000003259atxn1b9958.123ENSGMOG00000013508atxn1b10058.123Gadus_morhua
ENSOMEG00000003259atxn1b9939.189ENSGALG00000012709ATXN19940.249Gallus_gallus
ENSOMEG00000003259atxn1b10076.591ENSGAFG00000007295atxn1b10076.951Gambusia_affinis
ENSOMEG00000003259atxn1b9939.495ENSGAFG00000010544atxn1a9938.902Gambusia_affinis
ENSOMEG00000003259atxn1b9938.425ENSGACG00000003472atxn1a9938.615Gasterosteus_aculeatus
ENSOMEG00000003259atxn1b9970.221ENSGACG00000008747atxn1b10070.221Gasterosteus_aculeatus
ENSOMEG00000003259atxn1b9938.634ENSGAGG00000006868ATXN19938.858Gopherus_agassizii
ENSOMEG00000003259atxn1b9937.389ENSGGOG00000004169ATXN19937.736Gorilla_gorilla
ENSOMEG00000003259atxn1b10079.257ENSHBUG00000016081atxn1b10079.376Haplochromis_burtoni
ENSOMEG00000003259atxn1b9939.726ENSHBUG00000002508atxn1a9939.977Haplochromis_burtoni
ENSOMEG00000003259atxn1b9939.033ENSHGLG00000009360ATXN19939.394Heterocephalus_glaber_female
ENSOMEG00000003259atxn1b9939.033ENSHGLG00100003038ATXN19939.394Heterocephalus_glaber_male
ENSOMEG00000003259atxn1b8740.429ENSHCOG00000019032atxn1a9440.426Hippocampus_comes
ENSOMEG00000003259atxn1b9972.749ENSHCOG00000014835atxn1b9972.869Hippocampus_comes
ENSOMEG00000003259atxn1b9943.522ENSIPUG00000002088atxn1b10043.315Ictalurus_punctatus
ENSOMEG00000003259atxn1b9940.736ENSIPUG00000001402atxn19941.292Ictalurus_punctatus
ENSOMEG00000003259atxn1b9939.238ENSSTOG00000025423ATXN19939.663Ictidomys_tridecemlineatus
ENSOMEG00000003259atxn1b9938.531ENSJJAG00000000377Atxn19938.757Jaculus_jaculus
ENSOMEG00000003259atxn1b9980.000ENSKMAG00000013507atxn1b9979.879Kryptolebias_marmoratus
ENSOMEG00000003259atxn1b9939.729ENSKMAG00000007216atxn1a9939.374Kryptolebias_marmoratus
ENSOMEG00000003259atxn1b8042.120ENSLBEG00000024388atxn1a9941.096Labrus_bergylta
ENSOMEG00000003259atxn1b10075.776ENSLBEG00000024264atxn1b10075.537Labrus_bergylta
ENSOMEG00000003259atxn1b9939.274ENSLACG00000005371ATXN19939.047Latimeria_chalumnae
ENSOMEG00000003259atxn1b9946.127ENSLOCG00000002910atxn1a9945.780Lepisosteus_oculatus
ENSOMEG00000003259atxn1b9938.281ENSLAFG00000015231ATXN19938.994Loxodonta_africana
ENSOMEG00000003259atxn1b9937.736ENSMFAG00000032779ATXN19938.239Macaca_fascicularis
ENSOMEG00000003259atxn1b9937.709ENSMMUG00000002940ATXN19938.239Macaca_mulatta
ENSOMEG00000003259atxn1b9937.820ENSMNEG00000036667ATXN19938.324Macaca_nemestrina
ENSOMEG00000003259atxn1b7540.516ENSMLEG00000040480ATXN19739.419Mandrillus_leucophaeus
ENSOMEG00000003259atxn1b10079.856ENSMAMG00000011503atxn1b10079.856Mastacembelus_armatus
ENSOMEG00000003259atxn1b9940.206ENSMAMG00000014004atxn1a9940.888Mastacembelus_armatus
ENSOMEG00000003259atxn1b9939.612ENSMZEG00005003602atxn1a9939.816Maylandia_zebra
ENSOMEG00000003259atxn1b10079.376ENSMZEG00005015064atxn1b10079.496Maylandia_zebra
ENSOMEG00000003259atxn1b9938.826ENSMGAG00000003028ATXN19938.889Meleagris_gallopavo
ENSOMEG00000003259atxn1b9938.401ENSMAUG00000011491Atxn19938.826Mesocricetus_auratus
ENSOMEG00000003259atxn1b9938.358ENSMICG00000011875ATXN19938.895Microcebus_murinus
ENSOMEG00000003259atxn1b9939.101ENSMOCG00000001527Atxn19939.527Microtus_ochrogaster
ENSOMEG00000003259atxn1b9940.136ENSMMOG00000018593atxn1a9940.632Mola_mola
ENSOMEG00000003259atxn1b9976.632ENSMMOG00000002884atxn1b10076.632Mola_mola
ENSOMEG00000003259atxn1b9938.667ENSMODG00000010827ATXN19938.419Monodelphis_domestica
ENSOMEG00000003259atxn1b9980.244ENSMALG00000012137atxn1b9980.244Monopterus_albus
ENSOMEG00000003259atxn1b9940.404ENSMALG00000005209atxn1a9940.565Monopterus_albus
ENSOMEG00000003259atxn1b9938.964MGP_CAROLIEiJ_G0018479Atxn19938.939Mus_caroli
ENSOMEG00000003259atxn1b9939.008ENSMUSG00000046876Atxn19938.983Mus_musculus
ENSOMEG00000003259atxn1b9939.052MGP_PahariEiJ_G0019546Atxn19939.027Mus_pahari
ENSOMEG00000003259atxn1b9939.057MGP_SPRETEiJ_G0019357Atxn19939.033Mus_spretus
ENSOMEG00000003259atxn1b9939.038ENSMPUG00000005398ATXN19939.101Mustela_putorius_furo
ENSOMEG00000003259atxn1b9939.126ENSMLUG00000000896ATXN19939.052Myotis_lucifugus
ENSOMEG00000003259atxn1b9938.444ENSNGAG00000020481Atxn19938.870Nannospalax_galili
ENSOMEG00000003259atxn1b9939.498ENSNBRG00000013216atxn1a9939.588Neolamprologus_brichardi
ENSOMEG00000003259atxn1b10073.026ENSNBRG00000014776atxn1b10073.512Neolamprologus_brichardi
ENSOMEG00000003259atxn1b9937.904ENSNLEG00000001064ATXN19938.367Nomascus_leucogenys
ENSOMEG00000003259atxn1b9937.542ENSMEUG00000014680ATXN19737.178Notamacropus_eugenii
ENSOMEG00000003259atxn1b9938.685ENSODEG00000006297ATXN19939.353Octodon_degus
ENSOMEG00000003259atxn1b10079.736ENSONIG00000003094atxn1b10079.856Oreochromis_niloticus
ENSOMEG00000003259atxn1b8933.576ENSOANG00000011866ATXN19734.303Ornithorhynchus_anatinus
ENSOMEG00000003259atxn1b9939.394ENSOCUG00000015360ATXN19939.642Oryctolagus_cuniculus
ENSOMEG00000003259atxn1b9937.140ENSORLG00000013003atxn1a9937.832Oryzias_latipes
ENSOMEG00000003259atxn1b10093.229ENSORLG00000008288atxn1b10093.229Oryzias_latipes
ENSOMEG00000003259atxn1b9937.241ENSORLG00020006722atxn1a9937.024Oryzias_latipes_hni
ENSOMEG00000003259atxn1b10092.883ENSORLG00020013514atxn1b10092.883Oryzias_latipes_hni
ENSOMEG00000003259atxn1b10093.229ENSORLG00015019876atxn1b10093.229Oryzias_latipes_hsok
ENSOMEG00000003259atxn1b9936.957ENSORLG00015014668atxn1a9936.746Oryzias_latipes_hsok
ENSOMEG00000003259atxn1b9938.298ENSOGAG00000028623ATXN110038.608Otolemur_garnettii
ENSOMEG00000003259atxn1b7040.640ENSOARG00000012141ATXN17939.880Ovis_aries
ENSOMEG00000003259atxn1b9937.294ENSPPAG00000028993ATXN19937.638Pan_paniscus
ENSOMEG00000003259atxn1b9939.724ENSPPRG00000004547ATXN19740.396Panthera_pardus
ENSOMEG00000003259atxn1b9937.445ENSPTRG00000039250ATXN19937.763Pan_troglodytes
ENSOMEG00000003259atxn1b9937.709ENSPANG00000024249ATXN19938.085Papio_anubis
ENSOMEG00000003259atxn1b9944.820ENSPKIG00000018323atxn1b9945.191Paramormyrops_kingsleyae
ENSOMEG00000003259atxn1b7335.917ENSPSIG00000007158ATXN19236.499Pelodiscus_sinensis
ENSOMEG00000003259atxn1b7240.000ENSPMGG00000022926atxn1a7340.917Periophthalmus_magnuspinnatus
ENSOMEG00000003259atxn1b9962.668ENSPMGG00000013610atxn1b9965.728Periophthalmus_magnuspinnatus
ENSOMEG00000003259atxn1b9938.713ENSPEMG00000014930Atxn19939.140Peromyscus_maniculatus_bairdii
ENSOMEG00000003259atxn1b9939.038ENSPCIG00000019413ATXN19938.926Phascolarctos_cinereus
ENSOMEG00000003259atxn1b9938.639ENSPFOG00000014422atxn1a9939.401Poecilia_formosa
ENSOMEG00000003259atxn1b8669.048ENSPLAG00000018978atxn1a9571.739Poecilia_latipinna
ENSOMEG00000003259atxn1b10078.151ENSPLAG00000018703atxn1b10078.151Poecilia_latipinna
ENSOMEG00000003259atxn1b10078.151ENSPMEG00000023723atxn1b10078.151Poecilia_mexicana
ENSOMEG00000003259atxn1b9939.489ENSPMEG00000002647atxn1a9939.605Poecilia_mexicana
ENSOMEG00000003259atxn1b10078.391ENSPREG00000020308atxn1b10078.391Poecilia_reticulata
ENSOMEG00000003259atxn1b9938.286ENSPREG00000008333atxn1a9938.927Poecilia_reticulata
ENSOMEG00000003259atxn1b9937.225ENSPPYG00000016254ATXN19937.569Pongo_abelii
ENSOMEG00000003259atxn1b6758.491ENSPCAG00000008196ATXN15950.936Procavia_capensis
ENSOMEG00000003259atxn1b9938.583ENSPCOG00000013612ATXN19939.121Propithecus_coquereli
ENSOMEG00000003259atxn1b8939.837ENSPVAG00000016937ATXN18540.650Pteropus_vampyrus
ENSOMEG00000003259atxn1b9939.498ENSPNYG00000011920atxn1a9939.816Pundamilia_nyererei
ENSOMEG00000003259atxn1b10073.269ENSPNYG00000017095atxn1b10073.755Pundamilia_nyererei
ENSOMEG00000003259atxn1b9942.603ENSPNAG00000001226atxn1b10042.175Pygocentrus_nattereri
ENSOMEG00000003259atxn1b9941.686ENSPNAG00000010587atxn1a9943.187Pygocentrus_nattereri
ENSOMEG00000003259atxn1b9939.027ENSRNOG00000016998Atxn19939.002Rattus_norvegicus
ENSOMEG00000003259atxn1b9937.514ENSRBIG00000028213ATXN19937.931Rhinopithecus_bieti
ENSOMEG00000003259atxn1b9937.696ENSRROG00000032751ATXN19938.143Rhinopithecus_roxellana
ENSOMEG00000003259atxn1b7534.125ENSSBOG00000030307-9133.921Saimiri_boliviensis_boliviensis
ENSOMEG00000003259atxn1b9938.376ENSSBOG00000017381-9938.504Saimiri_boliviensis_boliviensis
ENSOMEG00000003259atxn1b9941.913ENSSFOG00015005189atxn19943.208Scleropages_formosus
ENSOMEG00000003259atxn1b9943.864ENSSFOG00015000179atxn1b9943.375Scleropages_formosus
ENSOMEG00000003259atxn1b9739.510ENSSMAG00000007731atxn1a9439.653Scophthalmus_maximus
ENSOMEG00000003259atxn1b10078.563ENSSMAG00000019621atxn1b10078.563Scophthalmus_maximus
ENSOMEG00000003259atxn1b9941.450ENSSDUG00000011376atxn1a9941.216Seriola_dumerili
ENSOMEG00000003259atxn1b10081.894ENSSDUG00000006990atxn1b10082.134Seriola_dumerili
ENSOMEG00000003259atxn1b10082.014ENSSLDG00000016306atxn1b10082.254Seriola_lalandi_dorsalis
ENSOMEG00000003259atxn1b9941.317ENSSLDG00000013505atxn1a9941.263Seriola_lalandi_dorsalis
ENSOMEG00000003259atxn1b9938.523ENSSPUG00000016650ATXN19938.497Sphenodon_punctatus
ENSOMEG00000003259atxn1b10082.609ENSSPAG00000003388atxn1b10082.729Stegastes_partitus
ENSOMEG00000003259atxn1b9940.657ENSSPAG00000019849atxn1a9941.270Stegastes_partitus
ENSOMEG00000003259atxn1b9938.300ENSSSCG00000001065ATXN19938.521Sus_scrofa
ENSOMEG00000003259atxn1b9937.712ENSTGUG00000005986ATXN19938.235Taeniopygia_guttata
ENSOMEG00000003259atxn1b9971.170ENSTRUG00000024789atxn1b9971.773Takifugu_rubripes
ENSOMEG00000003259atxn1b9940.365ENSTRUG00000014645atxn1a9940.525Takifugu_rubripes
ENSOMEG00000003259atxn1b9970.379ENSTNIG00000018398atxn1b9970.624Tetraodon_nigroviridis
ENSOMEG00000003259atxn1b9941.020ENSTNIG00000005089atxn1a9939.931Tetraodon_nigroviridis
ENSOMEG00000003259atxn1b9838.488ENSTTRG00000014678ATXN19638.845Tursiops_truncatus
ENSOMEG00000003259atxn1b9938.410ENSUAMG00000004064ATXN19938.608Ursus_americanus
ENSOMEG00000003259atxn1b5244.161ENSUMAG00000017635-9245.223Ursus_maritimus
ENSOMEG00000003259atxn1b9938.710ENSVVUG00000003386ATXN19939.130Vulpes_vulpes
ENSOMEG00000003259atxn1b9937.915ENSXETG00000014184atxn19938.259Xenopus_tropicalis
ENSOMEG00000003259atxn1b9939.191ENSXCOG00000020061atxn1a9938.960Xiphophorus_couchianus
ENSOMEG00000003259atxn1b10072.848ENSXCOG00000019714atxn1b10073.333Xiphophorus_couchianus
ENSOMEG00000003259atxn1b10077.671ENSXMAG00000014270atxn1b10078.151Xiphophorus_maculatus
ENSOMEG00000003259atxn1b9938.266ENSXMAG00000003615atxn1a9938.832Xiphophorus_maculatus

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