EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000003331 (Gene tree)
Gene ID: 112144856
Gene Symbol: trnt1
Alias: -
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 9156 bases
Position: chrNVQA01000009.1:6516134-6525289
Accession: 112144856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000002383	PolyA_pol	PF01743.20	9.9e-34	1	1
ENSOMEP00000002384	PolyA_pol	PF01743.20	1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000012584	-	1272	-	ENSOMEP00000002384	423 (aa)	XP_024125463	UPI000CF82C50
ENSOMET00000012595	-	1287	-	ENSOMEP00000002383	428 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000003331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000003331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000003331	trnt1	97	66.019	ENSG00000072756	TRNT1	95	66.019	Homo_sapiens
ENSOMEG00000003331	trnt1	97	77.317	ENSAPOG00000013687	trnt1	96	77.317	Acanthochromis_polyacanthus
ENSOMEG00000003331	trnt1	97	64.734	ENSAMEG00000014520	TRNT1	95	64.734	Ailuropoda_melanoleuca
ENSOMEG00000003331	trnt1	99	77.647	ENSACIG00000021706	trnt1	99	77.647	Amphilophus_citrinellus
ENSOMEG00000003331	trnt1	99	77.465	ENSAOCG00000024612	trnt1	99	77.465	Amphiprion_ocellaris
ENSOMEG00000003331	trnt1	96	71.046	ENSAPEG00000022627	trnt1	95	71.046	Amphiprion_percula
ENSOMEG00000003331	trnt1	95	79.901	ENSATEG00000008928	trnt1	99	79.901	Anabas_testudineus
ENSOMEG00000003331	trnt1	91	66.057	ENSAPLG00000004258	TRNT1	95	66.057	Anas_platyrhynchos
ENSOMEG00000003331	trnt1	99	62.264	ENSACAG00000005657	TRNT1	96	62.264	Anolis_carolinensis
ENSOMEG00000003331	trnt1	97	65.534	ENSANAG00000024802	TRNT1	95	65.534	Aotus_nancymaae
ENSOMEG00000003331	trnt1	100	77.518	ENSACLG00000022227	trnt1	100	77.518	Astatotilapia_calliptera
ENSOMEG00000003331	trnt1	99	70.561	ENSAMXG00000003960	trnt1	99	70.561	Astyanax_mexicanus
ENSOMEG00000003331	trnt1	97	63.592	ENSBTAG00000019534	TRNT1	95	63.592	Bos_taurus
ENSOMEG00000003331	trnt1	96	43.614	WBGene00010089	hpo-31	94	43.614	Caenorhabditis_elegans
ENSOMEG00000003331	trnt1	97	65.291	ENSCJAG00000015466	TRNT1	95	65.291	Callithrix_jacchus
ENSOMEG00000003331	trnt1	97	65.049	ENSCAFG00000005985	TRNT1	94	65.049	Canis_familiaris
ENSOMEG00000003331	trnt1	97	65.049	ENSCAFG00020014746	TRNT1	94	65.049	Canis_lupus_dingo
ENSOMEG00000003331	trnt1	97	64.078	ENSCHIG00000007030	TRNT1	94	64.078	Capra_hircus
ENSOMEG00000003331	trnt1	97	65.777	ENSTSYG00000013390	TRNT1	95	65.777	Carlito_syrichta
ENSOMEG00000003331	trnt1	89	51.989	ENSCAPG00000006891	TRNT1	99	51.989	Cavia_aperea
ENSOMEG00000003331	trnt1	99	63.318	ENSCPOG00000007849	TRNT1	97	66.154	Cavia_porcellus
ENSOMEG00000003331	trnt1	96	63.659	ENSCCAG00000002919	TRNT1	99	63.659	Cebus_capucinus
ENSOMEG00000003331	trnt1	97	66.019	ENSCATG00000031985	TRNT1	94	66.019	Cercocebus_atys
ENSOMEG00000003331	trnt1	97	65.777	ENSCLAG00000005186	TRNT1	86	78.689	Chinchilla_lanigera
ENSOMEG00000003331	trnt1	97	66.019	ENSCSAG00000011052	TRNT1	95	66.019	Chlorocebus_sabaeus
ENSOMEG00000003331	trnt1	82	78.022	ENSCHOG00000005712	TRNT1	80	78.022	Choloepus_hoffmanni
ENSOMEG00000003331	trnt1	97	67.397	ENSCPBG00000017636	TRNT1	94	67.397	Chrysemys_picta_bellii
ENSOMEG00000003331	trnt1	95	40.247	ENSCING00000007069	-	99	40.247	Ciona_intestinalis
ENSOMEG00000003331	trnt1	95	42.327	ENSCSAVG00000007494	-	95	42.327	Ciona_savignyi
ENSOMEG00000003331	trnt1	97	66.262	ENSCANG00000039030	TRNT1	95	66.262	Colobus_angolensis_palliatus
ENSOMEG00000003331	trnt1	97	65.534	ENSCGRG00001009998	Trnt1	95	65.534	Cricetulus_griseus_chok1gshd
ENSOMEG00000003331	trnt1	97	65.534	ENSCGRG00000013410	Trnt1	88	78.495	Cricetulus_griseus_crigri
ENSOMEG00000003331	trnt1	100	75.352	ENSCSEG00000008157	trnt1	100	75.352	Cynoglossus_semilaevis
ENSOMEG00000003331	trnt1	99	79.009	ENSCVAG00000019770	trnt1	99	79.009	Cyprinodon_variegatus
ENSOMEG00000003331	trnt1	99	70.794	ENSDARG00000075297	trnt1	99	70.794	Danio_rerio
ENSOMEG00000003331	trnt1	97	65.534	ENSDNOG00000008837	TRNT1	95	65.534	Dasypus_novemcinctus
ENSOMEG00000003331	trnt1	96	67.157	ENSDORG00000014035	Trnt1	94	67.157	Dipodomys_ordii
ENSOMEG00000003331	trnt1	95	48.020	FBgn0037369	CG2100	83	48.020	Drosophila_melanogaster
ENSOMEG00000003331	trnt1	58	70.850	ENSETEG00000018177	TRNT1	99	70.850	Echinops_telfairi
ENSOMEG00000003331	trnt1	99	60.190	ENSEBUG00000012779	-	99	60.190	Eptatretus_burgeri
ENSOMEG00000003331	trnt1	97	66.019	ENSEASG00005003577	TRNT1	95	66.019	Equus_asinus_asinus
ENSOMEG00000003331	trnt1	97	66.262	ENSECAG00000014420	TRNT1	95	66.262	Equus_caballus
ENSOMEG00000003331	trnt1	96	66.749	ENSEEUG00000009567	TRNT1	94	66.749	Erinaceus_europaeus
ENSOMEG00000003331	trnt1	97	73.839	ENSELUG00000003802	trnt1	95	73.839	Esox_lucius
ENSOMEG00000003331	trnt1	97	64.806	ENSFCAG00000026805	TRNT1	94	64.806	Felis_catus
ENSOMEG00000003331	trnt1	91	65.274	ENSFALG00000013539	TRNT1	99	65.274	Ficedula_albicollis
ENSOMEG00000003331	trnt1	97	65.049	ENSFDAG00000018412	TRNT1	85	77.049	Fukomys_damarensis
ENSOMEG00000003331	trnt1	99	79.481	ENSFHEG00000019294	trnt1	99	79.481	Fundulus_heteroclitus
ENSOMEG00000003331	trnt1	98	71.875	ENSGMOG00000007460	trnt1	98	71.875	Gadus_morhua
ENSOMEG00000003331	trnt1	96	65.594	ENSGALG00000017368	TRNT1	94	65.594	Gallus_gallus
ENSOMEG00000003331	trnt1	100	76.941	ENSGAFG00000008647	trnt1	100	76.941	Gambusia_affinis
ENSOMEG00000003331	trnt1	99	75.822	ENSGACG00000011903	trnt1	96	79.581	Gasterosteus_aculeatus
ENSOMEG00000003331	trnt1	97	67.153	ENSGAGG00000020942	TRNT1	93	67.153	Gopherus_agassizii
ENSOMEG00000003331	trnt1	97	65.777	ENSGGOG00000015286	TRNT1	95	65.777	Gorilla_gorilla
ENSOMEG00000003331	trnt1	100	77.752	ENSHBUG00000002797	trnt1	100	77.752	Haplochromis_burtoni
ENSOMEG00000003331	trnt1	97	65.291	ENSHGLG00000003649	TRNT1	95	65.291	Heterocephalus_glaber_female
ENSOMEG00000003331	trnt1	99	58.508	ENSHGLG00000000221	-	99	58.508	Heterocephalus_glaber_female
ENSOMEG00000003331	trnt1	97	64.078	ENSHGLG00100016421	TRNT1	89	70.526	Heterocephalus_glaber_male
ENSOMEG00000003331	trnt1	96	75.490	ENSHCOG00000010618	trnt1	96	75.490	Hippocampus_comes
ENSOMEG00000003331	trnt1	99	71.028	ENSIPUG00000000971	trnt1	99	71.028	Ictalurus_punctatus
ENSOMEG00000003331	trnt1	97	66.748	ENSSTOG00000000150	TRNT1	88	78.689	Ictidomys_tridecemlineatus
ENSOMEG00000003331	trnt1	97	66.019	ENSJJAG00000018561	Trnt1	95	66.019	Jaculus_jaculus
ENSOMEG00000003331	trnt1	100	79.907	ENSKMAG00000011307	trnt1	100	79.907	Kryptolebias_marmoratus
ENSOMEG00000003331	trnt1	96	70.803	ENSLBEG00000019457	trnt1	97	70.803	Labrus_bergylta
ENSOMEG00000003331	trnt1	98	67.070	ENSLACG00000013227	TRNT1	95	67.070	Latimeria_chalumnae
ENSOMEG00000003331	trnt1	97	69.756	ENSLOCG00000011105	trnt1	94	69.756	Lepisosteus_oculatus
ENSOMEG00000003331	trnt1	97	65.534	ENSLAFG00000023191	TRNT1	95	65.534	Loxodonta_africana
ENSOMEG00000003331	trnt1	97	66.019	ENSMFAG00000045113	TRNT1	94	66.019	Macaca_fascicularis
ENSOMEG00000003331	trnt1	97	66.019	ENSMMUG00000017983	TRNT1	94	66.019	Macaca_mulatta
ENSOMEG00000003331	trnt1	97	66.019	ENSMNEG00000037805	TRNT1	94	66.019	Macaca_nemestrina
ENSOMEG00000003331	trnt1	90	66.754	ENSMLEG00000033671	TRNT1	99	66.754	Mandrillus_leucophaeus
ENSOMEG00000003331	trnt1	96	79.167	ENSMAMG00000023401	trnt1	96	79.167	Mastacembelus_armatus
ENSOMEG00000003331	trnt1	100	77.518	ENSMZEG00005009141	trnt1	100	77.518	Maylandia_zebra
ENSOMEG00000003331	trnt1	75	62.069	ENSMGAG00000009971	TRNT1	99	62.069	Meleagris_gallopavo
ENSOMEG00000003331	trnt1	97	65.534	ENSMAUG00000020707	Trnt1	95	65.534	Mesocricetus_auratus
ENSOMEG00000003331	trnt1	99	64.554	ENSMICG00000016615	TRNT1	98	64.554	Microcebus_murinus
ENSOMEG00000003331	trnt1	97	65.291	ENSMOCG00000004539	Trnt1	95	65.291	Microtus_ochrogaster
ENSOMEG00000003331	trnt1	99	76.415	ENSMMOG00000010742	trnt1	99	76.415	Mola_mola
ENSOMEG00000003331	trnt1	99	64.133	ENSMODG00000004368	TRNT1	96	64.133	Monodelphis_domestica
ENSOMEG00000003331	trnt1	96	77.451	ENSMALG00000008376	trnt1	95	77.451	Monopterus_albus
ENSOMEG00000003331	trnt1	99	64.235	MGP_CAROLIEiJ_G0028698	Trnt1	91	77.041	Mus_caroli
ENSOMEG00000003331	trnt1	99	64.235	ENSMUSG00000013736	Trnt1	91	77.041	Mus_musculus
ENSOMEG00000003331	trnt1	99	64.471	MGP_PahariEiJ_G0022449	Trnt1	97	77.041	Mus_pahari
ENSOMEG00000003331	trnt1	99	64.235	MGP_SPRETEiJ_G0029726	Trnt1	91	77.041	Mus_spretus
ENSOMEG00000003331	trnt1	97	64.320	ENSMPUG00000017017	TRNT1	94	64.320	Mustela_putorius_furo
ENSOMEG00000003331	trnt1	91	66.146	ENSMLUG00000011864	TRNT1	99	66.146	Myotis_lucifugus
ENSOMEG00000003331	trnt1	99	62.150	ENSNGAG00000000537	Trnt1	90	74.372	Nannospalax_galili
ENSOMEG00000003331	trnt1	81	77.168	ENSNBRG00000023606	trnt1	99	77.168	Neolamprologus_brichardi
ENSOMEG00000003331	trnt1	97	66.019	ENSNLEG00000003226	TRNT1	95	66.019	Nomascus_leucogenys
ENSOMEG00000003331	trnt1	99	63.895	ENSMEUG00000004684	TRNT1	96	63.895	Notamacropus_eugenii
ENSOMEG00000003331	trnt1	90	62.042	ENSOPRG00000015067	TRNT1	99	62.042	Ochotona_princeps
ENSOMEG00000003331	trnt1	97	65.777	ENSODEG00000007597	TRNT1	95	65.777	Octodon_degus
ENSOMEG00000003331	trnt1	99	77.934	ENSONIG00000020273	trnt1	98	77.934	Oreochromis_niloticus
ENSOMEG00000003331	trnt1	99	60.890	ENSOANG00000007514	TRNT1	99	60.890	Ornithorhynchus_anatinus
ENSOMEG00000003331	trnt1	98	65.228	ENSOCUG00000008580	TRNT1	97	65.228	Oryctolagus_cuniculus
ENSOMEG00000003331	trnt1	100	84.870	ENSORLG00000003165	trnt1	100	84.870	Oryzias_latipes
ENSOMEG00000003331	trnt1	100	84.161	ENSORLG00020022060	trnt1	100	84.161	Oryzias_latipes_hni
ENSOMEG00000003331	trnt1	100	84.870	ENSORLG00015018915	trnt1	99	84.870	Oryzias_latipes_hsok
ENSOMEG00000003331	trnt1	97	64.078	ENSOARG00000008631	TRNT1	94	64.078	Ovis_aries
ENSOMEG00000003331	trnt1	97	65.534	ENSPPAG00000043566	TRNT1	95	65.534	Pan_paniscus
ENSOMEG00000003331	trnt1	97	65.049	ENSPPRG00000001327	TRNT1	94	65.049	Panthera_pardus
ENSOMEG00000003331	trnt1	97	65.049	ENSPTIG00000011448	TRNT1	94	65.049	Panthera_tigris_altaica
ENSOMEG00000003331	trnt1	97	65.534	ENSPTRG00000014564	TRNT1	95	65.534	Pan_troglodytes
ENSOMEG00000003331	trnt1	97	66.019	ENSPANG00000025944	TRNT1	94	66.019	Papio_anubis
ENSOMEG00000003331	trnt1	97	71.256	ENSPKIG00000020015	trnt1	96	71.256	Paramormyrops_kingsleyae
ENSOMEG00000003331	trnt1	93	67.089	ENSPSIG00000017356	TRNT1	99	67.222	Pelodiscus_sinensis
ENSOMEG00000003331	trnt1	99	74.883	ENSPMGG00000008888	trnt1	98	74.883	Periophthalmus_magnuspinnatus
ENSOMEG00000003331	trnt1	97	65.777	ENSPEMG00000019845	Trnt1	95	65.777	Peromyscus_maniculatus_bairdii
ENSOMEG00000003331	trnt1	99	63.981	ENSPCIG00000030436	TRNT1	97	63.981	Phascolarctos_cinereus
ENSOMEG00000003331	trnt1	99	77.910	ENSPFOG00000006194	trnt1	99	77.910	Poecilia_formosa
ENSOMEG00000003331	trnt1	99	77.910	ENSPLAG00000015623	trnt1	100	79.208	Poecilia_latipinna
ENSOMEG00000003331	trnt1	100	77.647	ENSPMEG00000012216	trnt1	100	78.960	Poecilia_mexicana
ENSOMEG00000003331	trnt1	100	77.176	ENSPREG00000021470	trnt1	100	77.176	Poecilia_reticulata
ENSOMEG00000003331	trnt1	97	65.534	ENSPPYG00000013702	TRNT1	95	65.534	Pongo_abelii
ENSOMEG00000003331	trnt1	90	67.016	ENSPCAG00000001951	TRNT1	99	67.016	Procavia_capensis
ENSOMEG00000003331	trnt1	99	65.166	ENSPCOG00000022228	TRNT1	97	65.166	Propithecus_coquereli
ENSOMEG00000003331	trnt1	90	65.445	ENSPVAG00000008784	TRNT1	99	65.445	Pteropus_vampyrus
ENSOMEG00000003331	trnt1	100	77.283	ENSPNYG00000003120	trnt1	100	77.283	Pundamilia_nyererei
ENSOMEG00000003331	trnt1	99	71.495	ENSPNAG00000000565	trnt1	99	71.495	Pygocentrus_nattereri
ENSOMEG00000003331	trnt1	97	65.049	ENSRNOG00000006432	Trnt1	95	65.049	Rattus_norvegicus
ENSOMEG00000003331	trnt1	97	65.291	ENSRBIG00000042632	TRNT1	95	65.291	Rhinopithecus_bieti
ENSOMEG00000003331	trnt1	97	66.019	ENSRROG00000036866	TRNT1	95	66.019	Rhinopithecus_roxellana
ENSOMEG00000003331	trnt1	97	65.291	ENSSBOG00000021208	TRNT1	95	65.291	Saimiri_boliviensis_boliviensis
ENSOMEG00000003331	trnt1	96	65.025	ENSSHAG00000018861	TRNT1	94	65.025	Sarcophilus_harrisii
ENSOMEG00000003331	trnt1	97	71.394	ENSSFOG00015020844	trnt1	95	70.874	Scleropages_formosus
ENSOMEG00000003331	trnt1	99	74.883	ENSSMAG00000015432	trnt1	98	74.883	Scophthalmus_maximus
ENSOMEG00000003331	trnt1	99	75.822	ENSSDUG00000012320	trnt1	100	75.822	Seriola_dumerili
ENSOMEG00000003331	trnt1	57	74.895	ENSSLDG00000016463	-	91	74.895	Seriola_lalandi_dorsalis
ENSOMEG00000003331	trnt1	99	75.587	ENSSLDG00000009325	trnt1	100	75.587	Seriola_lalandi_dorsalis
ENSOMEG00000003331	trnt1	90	68.063	ENSSPUG00000014153	TRNT1	99	68.063	Sphenodon_punctatus
ENSOMEG00000003331	trnt1	99	77.465	ENSSPAG00000021005	trnt1	99	77.465	Stegastes_partitus
ENSOMEG00000003331	trnt1	97	65.291	ENSSSCG00000011529	TRNT1	95	65.291	Sus_scrofa
ENSOMEG00000003331	trnt1	96	65.099	ENSTGUG00000010192	TRNT1	99	65.099	Taeniopygia_guttata
ENSOMEG00000003331	trnt1	99	73.944	ENSTRUG00000001088	trnt1	99	73.944	Takifugu_rubripes
ENSOMEG00000003331	trnt1	98	76.513	ENSTNIG00000007363	trnt1	95	76.513	Tetraodon_nigroviridis
ENSOMEG00000003331	trnt1	83	46.518	ENSTBEG00000006367	TRNT1	99	46.518	Tupaia_belangeri
ENSOMEG00000003331	trnt1	98	64.048	ENSTTRG00000007803	TRNT1	97	64.048	Tursiops_truncatus
ENSOMEG00000003331	trnt1	97	64.806	ENSUAMG00000022574	TRNT1	94	64.806	Ursus_americanus
ENSOMEG00000003331	trnt1	97	64.806	ENSUMAG00000024092	TRNT1	94	64.806	Ursus_maritimus
ENSOMEG00000003331	trnt1	97	65.049	ENSVVUG00000012810	TRNT1	94	65.049	Vulpes_vulpes
ENSOMEG00000003331	trnt1	99	58.019	ENSXETG00000025091	trnt1	99	59.701	Xenopus_tropicalis
ENSOMEG00000003331	trnt1	100	76.471	ENSXCOG00000010150	trnt1	100	76.471	Xiphophorus_couchianus
ENSOMEG00000003331	trnt1	100	76.941	ENSXMAG00000002227	trnt1	100	76.941	Xiphophorus_maculatus