EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000003441 (Gene tree)
Gene ID: 112148741
Gene Symbol: zmat4a
Alias: -
Full Name: zinc finger%2C matrin-type 4a
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 161982 bases
Position: chrNVQA01000012.1:1778347-1940328
Accession: ZDB-GENE-081104-333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000002480	zf-met	PF12874.7	2.1e-31	1	4
ENSOMEP00000002480	zf-met	PF12874.7	2.1e-31	2	4
ENSOMEP00000002480	zf-met	PF12874.7	2.1e-31	3	4
ENSOMEP00000002480	zf-met	PF12874.7	2.1e-31	4	4
ENSOMEP00000023383	zf-met	PF12874.7	2.4e-31	1	4
ENSOMEP00000023383	zf-met	PF12874.7	2.4e-31	2	4
ENSOMEP00000023383	zf-met	PF12874.7	2.4e-31	3	4
ENSOMEP00000023383	zf-met	PF12874.7	2.4e-31	4	4
ENSOMEP00000023356	zf-met	PF12874.7	1.7e-24	1	3
ENSOMEP00000023356	zf-met	PF12874.7	1.7e-24	2	3
ENSOMEP00000023356	zf-met	PF12874.7	1.7e-24	3	3
ENSOMEP00000002470	zf-met	PF12874.7	2.7e-23	1	3
ENSOMEP00000002470	zf-met	PF12874.7	2.7e-23	2	3
ENSOMEP00000002470	zf-met	PF12874.7	2.7e-23	3	3
ENSOMEP00000002480	zf-C2H2_jaz	PF12171.8	3.9e-24	1	2
ENSOMEP00000002480	zf-C2H2_jaz	PF12171.8	3.9e-24	2	2
ENSOMEP00000023383	zf-C2H2_jaz	PF12171.8	4.4e-24	1	2
ENSOMEP00000023383	zf-C2H2_jaz	PF12171.8	4.4e-24	2	2
ENSOMEP00000002470	zf-C2H2_jaz	PF12171.8	3.6e-19	1	2
ENSOMEP00000002470	zf-C2H2_jaz	PF12171.8	3.6e-19	2	2
ENSOMEP00000023356	zf-C2H2_jaz	PF12171.8	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000012444	-	963	-	ENSOMEP00000002470	296 (aa)	-	-
ENSOMET00000012427	-	842	-	ENSOMEP00000023356	269 (aa)	-	-
ENSOMET00000012438	-	1004	-	ENSOMEP00000002480	295 (aa)	-	-
ENSOMET00000012410	-	944	-	ENSOMEP00000023383	303 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000003441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000003441's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000003441	zmat4a	80	42.797	ENSOMEG00000003054	znf346	56	42.437
ENSOMEG00000003441	zmat4a	54	34.146	ENSOMEG00000011303	zmat3	77	37.000
ENSOMEG00000003441	zmat4a	59	70.400	ENSOMEG00000003526	zgc:171482	86	70.492

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000003441	zmat4a	76	75.556	ENSG00000165061	ZMAT4	100	75.325	Homo_sapiens
ENSOMEG00000003441	zmat4a	59	92.453	ENSAPOG00000007448	zmat4a	98	77.228	Acanthochromis_polyacanthus
ENSOMEG00000003441	zmat4a	76	75.000	ENSAMEG00000002758	ZMAT4	99	74.222	Ailuropoda_melanoleuca
ENSOMEG00000003441	zmat4a	77	91.150	ENSACIG00000009080	zmat4a	100	91.150	Amphilophus_citrinellus
ENSOMEG00000003441	zmat4a	87	95.057	ENSAOCG00000004416	zmat4a	100	93.536	Amphiprion_ocellaris
ENSOMEG00000003441	zmat4a	87	94.677	ENSAPEG00000018565	zmat4a	100	93.156	Amphiprion_percula
ENSOMEG00000003441	zmat4a	91	89.925	ENSATEG00000012630	zmat4a	99	88.722	Anabas_testudineus
ENSOMEG00000003441	zmat4a	77	78.761	ENSAPLG00000006106	ZMAT4	100	77.489	Anas_platyrhynchos
ENSOMEG00000003441	zmat4a	67	77.889	ENSACAG00000005388	ZMAT4	94	77.387	Anolis_carolinensis
ENSOMEG00000003441	zmat4a	76	75.556	ENSANAG00000027926	ZMAT4	100	75.325	Aotus_nancymaae
ENSOMEG00000003441	zmat4a	87	92.395	ENSACLG00000005038	zmat4a	100	90.875	Astatotilapia_calliptera
ENSOMEG00000003441	zmat4a	77	89.381	ENSAMXG00000035337	zmat4a	100	88.053	Astyanax_mexicanus
ENSOMEG00000003441	zmat4a	76	75.000	ENSBTAG00000017420	ZMAT4	100	74.459	Bos_taurus
ENSOMEG00000003441	zmat4a	76	74.554	ENSCAFG00000005744	ZMAT4	100	73.593	Canis_familiaris
ENSOMEG00000003441	zmat4a	59	70.000	ENSCAFG00020002716	ZMAT4	97	67.262	Canis_lupus_dingo
ENSOMEG00000003441	zmat4a	77	75.771	ENSCHIG00000022017	ZMAT4	100	74.892	Capra_hircus
ENSOMEG00000003441	zmat4a	62	72.455	ENSTSYG00000031413	ZMAT4	100	71.257	Carlito_syrichta
ENSOMEG00000003441	zmat4a	76	74.779	ENSCAPG00000014401	ZMAT4	100	74.026	Cavia_aperea
ENSOMEG00000003441	zmat4a	76	74.779	ENSCPOG00000015224	ZMAT4	100	74.026	Cavia_porcellus
ENSOMEG00000003441	zmat4a	76	75.556	ENSCCAG00000027437	ZMAT4	100	75.325	Cebus_capucinus
ENSOMEG00000003441	zmat4a	77	75.330	ENSCATG00000044978	ZMAT4	100	75.325	Cercocebus_atys
ENSOMEG00000003441	zmat4a	76	75.446	ENSCLAG00000000923	ZMAT4	100	74.459	Chinchilla_lanigera
ENSOMEG00000003441	zmat4a	76	75.556	ENSCSAG00000015108	ZMAT4	99	75.556	Chlorocebus_sabaeus
ENSOMEG00000003441	zmat4a	76	63.478	ENSCHOG00000003755	ZMAT4	100	62.609	Choloepus_hoffmanni
ENSOMEG00000003441	zmat4a	73	73.096	ENSCANG00000032136	ZMAT4	100	73.096	Colobus_angolensis_palliatus
ENSOMEG00000003441	zmat4a	76	75.221	ENSCGRG00001016583	Zmat4	100	74.892	Cricetulus_griseus_chok1gshd
ENSOMEG00000003441	zmat4a	76	75.221	ENSCGRG00000002696	Zmat4	100	74.892	Cricetulus_griseus_crigri
ENSOMEG00000003441	zmat4a	87	92.395	ENSCSEG00000013707	zmat4a	100	92.857	Cynoglossus_semilaevis
ENSOMEG00000003441	zmat4a	87	90.114	ENSCVAG00000000113	zmat4a	100	88.593	Cyprinodon_variegatus
ENSOMEG00000003441	zmat4a	94	82.394	ENSDARG00000092987	zmat4a	100	98.276	Danio_rerio
ENSOMEG00000003441	zmat4a	77	79.386	ENSDARG00000061419	zmat4b	100	78.947	Danio_rerio
ENSOMEG00000003441	zmat4a	76	75.446	ENSDNOG00000001045	ZMAT4	99	74.667	Dasypus_novemcinctus
ENSOMEG00000003441	zmat4a	76	75.111	ENSDORG00000009300	Zmat4	100	74.892	Dipodomys_ordii
ENSOMEG00000003441	zmat4a	59	74.214	ENSETEG00000010474	ZMAT4	81	73.125	Echinops_telfairi
ENSOMEG00000003441	zmat4a	76	75.446	ENSEASG00005010447	ZMAT4	100	74.459	Equus_asinus_asinus
ENSOMEG00000003441	zmat4a	76	75.446	ENSECAG00000021550	ZMAT4	100	74.892	Equus_caballus
ENSOMEG00000003441	zmat4a	76	64.732	ENSEEUG00000002565	ZMAT4	100	63.717	Erinaceus_europaeus
ENSOMEG00000003441	zmat4a	87	91.635	ENSELUG00000005097	zmat4a	100	91.255	Esox_lucius
ENSOMEG00000003441	zmat4a	77	75.664	ENSFCAG00000012775	ZMAT4	100	74.892	Felis_catus
ENSOMEG00000003441	zmat4a	76	78.448	ENSFALG00000006455	ZMAT4	100	78.261	Ficedula_albicollis
ENSOMEG00000003441	zmat4a	76	74.222	ENSFDAG00000015258	ZMAT4	97	73.160	Fukomys_damarensis
ENSOMEG00000003441	zmat4a	77	88.053	ENSFHEG00000022872	zmat4b	100	88.053	Fundulus_heteroclitus
ENSOMEG00000003441	zmat4a	76	92.444	ENSGMOG00000007950	zmat4a	100	91.556	Gadus_morhua
ENSOMEG00000003441	zmat4a	76	78.355	ENSGALG00000003470	ZMAT4	100	77.489	Gallus_gallus
ENSOMEG00000003441	zmat4a	87	90.114	ENSGAFG00000013149	zmat4a	100	89.354	Gambusia_affinis
ENSOMEG00000003441	zmat4a	76	96.444	ENSGACG00000005515	zmat4a	98	96.444	Gasterosteus_aculeatus
ENSOMEG00000003441	zmat4a	76	80.603	ENSGAGG00000004799	ZMAT4	100	79.654	Gopherus_agassizii
ENSOMEG00000003441	zmat4a	76	75.556	ENSGGOG00000006633	ZMAT4	100	75.325	Gorilla_gorilla
ENSOMEG00000003441	zmat4a	87	92.776	ENSHBUG00000012634	zmat4a	100	91.255	Haplochromis_burtoni
ENSOMEG00000003441	zmat4a	76	74.667	ENSHGLG00000003246	ZMAT4	100	73.593	Heterocephalus_glaber_female
ENSOMEG00000003441	zmat4a	59	73.125	ENSHGLG00100000081	ZMAT4	100	71.875	Heterocephalus_glaber_male
ENSOMEG00000003441	zmat4a	87	80.608	ENSIPUG00000022248	zmat4	100	82.301	Ictalurus_punctatus
ENSOMEG00000003441	zmat4a	76	76.106	ENSJJAG00000013484	Zmat4	100	74.026	Jaculus_jaculus
ENSOMEG00000003441	zmat4a	52	55.319	ENSLACG00000005109	-	92	53.472	Latimeria_chalumnae
ENSOMEG00000003441	zmat4a	94	75.111	ENSLACG00000006206	-	99	74.138	Latimeria_chalumnae
ENSOMEG00000003441	zmat4a	86	90.588	ENSLOCG00000015435	zmat4b	99	91.630	Lepisosteus_oculatus
ENSOMEG00000003441	zmat4a	76	75.000	ENSLAFG00000014753	ZMAT4	99	75.000	Loxodonta_africana
ENSOMEG00000003441	zmat4a	76	75.556	ENSMFAG00000043475	ZMAT4	100	75.325	Macaca_fascicularis
ENSOMEG00000003441	zmat4a	73	73.096	ENSMMUG00000000776	ZMAT4	100	73.096	Macaca_mulatta
ENSOMEG00000003441	zmat4a	76	75.556	ENSMNEG00000042102	ZMAT4	100	75.325	Macaca_nemestrina
ENSOMEG00000003441	zmat4a	76	75.556	ENSMLEG00000034448	ZMAT4	100	75.325	Mandrillus_leucophaeus
ENSOMEG00000003441	zmat4a	88	90.226	ENSMAMG00000019914	zmat4a	95	89.098	Mastacembelus_armatus
ENSOMEG00000003441	zmat4a	87	92.776	ENSMZEG00005004946	zmat4a	100	91.255	Maylandia_zebra
ENSOMEG00000003441	zmat4a	76	76.106	ENSMGAG00000002288	ZMAT4	99	74.783	Meleagris_gallopavo
ENSOMEG00000003441	zmat4a	73	71.939	ENSMICG00000047837	ZMAT4	100	71.574	Microcebus_murinus
ENSOMEG00000003441	zmat4a	76	74.779	ENSMOCG00000015996	Zmat4	100	74.026	Microtus_ochrogaster
ENSOMEG00000003441	zmat4a	87	92.969	ENSMMOG00000012619	zmat4a	98	90.943	Mola_mola
ENSOMEG00000003441	zmat4a	71	77.320	ENSMODG00000010499	ZMAT4	98	76.410	Monodelphis_domestica
ENSOMEG00000003441	zmat4a	87	92.395	ENSMALG00000015056	zmat4a	100	91.255	Monopterus_albus
ENSOMEG00000003441	zmat4a	77	74.890	MGP_CAROLIEiJ_G0030909	Zmat4	100	86.458	Mus_caroli
ENSOMEG00000003441	zmat4a	77	74.890	ENSMUSG00000037492	Zmat4	100	86.458	Mus_musculus
ENSOMEG00000003441	zmat4a	77	74.890	MGP_PahariEiJ_G0021380	Zmat4	100	86.458	Mus_pahari
ENSOMEG00000003441	zmat4a	77	74.890	MGP_SPRETEiJ_G0032028	Zmat4	100	86.458	Mus_spretus
ENSOMEG00000003441	zmat4a	77	74.779	ENSMPUG00000005832	ZMAT4	80	74.009	Mustela_putorius_furo
ENSOMEG00000003441	zmat4a	50	71.642	ENSMLUG00000014209	ZMAT4	100	70.370	Myotis_lucifugus
ENSOMEG00000003441	zmat4a	76	74.107	ENSNGAG00000015545	Zmat4	100	73.593	Nannospalax_galili
ENSOMEG00000003441	zmat4a	77	92.920	ENSNBRG00000011844	zmat4a	100	92.478	Neolamprologus_brichardi
ENSOMEG00000003441	zmat4a	76	75.556	ENSNLEG00000012564	ZMAT4	100	75.325	Nomascus_leucogenys
ENSOMEG00000003441	zmat4a	76	76.991	ENSMEUG00000000558	ZMAT4	100	76.549	Notamacropus_eugenii
ENSOMEG00000003441	zmat4a	76	75.446	ENSOPRG00000009257	ZMAT4	100	74.892	Ochotona_princeps
ENSOMEG00000003441	zmat4a	76	75.446	ENSODEG00000006439	ZMAT4	100	74.459	Octodon_degus
ENSOMEG00000003441	zmat4a	68	87.097	ENSONIG00000016086	zmat4a	100	87.097	Oreochromis_niloticus
ENSOMEG00000003441	zmat4a	74	37.903	ENSONIG00000020374	-	51	35.887	Oreochromis_niloticus
ENSOMEG00000003441	zmat4a	75	86.087	ENSOANG00000022431	ZMAT4	100	86.087	Ornithorhynchus_anatinus
ENSOMEG00000003441	zmat4a	76	75.446	ENSOCUG00000000977	ZMAT4	100	74.892	Oryctolagus_cuniculus
ENSOMEG00000003441	zmat4a	63	95.722	ENSORLG00000016169	zmat4b	86	95.722	Oryzias_latipes
ENSOMEG00000003441	zmat4a	100	97.368	ENSORLG00020019602	zmat4a	100	99.145	Oryzias_latipes_hni
ENSOMEG00000003441	zmat4a	100	97.368	ENSORLG00015009006	zmat4a	100	99.145	Oryzias_latipes_hsok
ENSOMEG00000003441	zmat4a	76	74.554	ENSOGAG00000012558	ZMAT4	99	73.778	Otolemur_garnettii
ENSOMEG00000003441	zmat4a	77	75.771	ENSOARG00000002354	ZMAT4	85	74.890	Ovis_aries
ENSOMEG00000003441	zmat4a	77	75.439	ENSPPAG00000042573	ZMAT4	100	75.330	Pan_paniscus
ENSOMEG00000003441	zmat4a	76	75.446	ENSPPRG00000007023	ZMAT4	100	74.026	Panthera_pardus
ENSOMEG00000003441	zmat4a	76	75.446	ENSPTIG00000019738	ZMAT4	100	74.026	Panthera_tigris_altaica
ENSOMEG00000003441	zmat4a	76	75.664	ENSPTRG00000020191	ZMAT4	100	75.325	Pan_troglodytes
ENSOMEG00000003441	zmat4a	76	75.556	ENSPANG00000014196	ZMAT4	100	75.325	Papio_anubis
ENSOMEG00000003441	zmat4a	77	62.573	ENSPKIG00000021792	zmat4b	100	62.573	Paramormyrops_kingsleyae
ENSOMEG00000003441	zmat4a	87	85.932	ENSPKIG00000000048	zmat4a	100	84.791	Paramormyrops_kingsleyae
ENSOMEG00000003441	zmat4a	76	81.034	ENSPSIG00000004847	ZMAT4	100	80.087	Pelodiscus_sinensis
ENSOMEG00000003441	zmat4a	77	83.333	ENSPMGG00000001436	zmat4b	100	83.333	Periophthalmus_magnuspinnatus
ENSOMEG00000003441	zmat4a	75	53.778	ENSPMAG00000004582	zmat4a	96	57.778	Petromyzon_marinus
ENSOMEG00000003441	zmat4a	76	78.112	ENSPCIG00000028706	ZMAT4	93	78.017	Phascolarctos_cinereus
ENSOMEG00000003441	zmat4a	87	90.494	ENSPFOG00000006742	zmat4a	100	89.354	Poecilia_formosa
ENSOMEG00000003441	zmat4a	86	90.196	ENSPLAG00000019268	zmat4a	100	89.020	Poecilia_latipinna
ENSOMEG00000003441	zmat4a	87	90.494	ENSPMEG00000007870	zmat4a	100	92.735	Poecilia_mexicana
ENSOMEG00000003441	zmat4a	87	90.494	ENSPREG00000014914	zmat4a	100	89.354	Poecilia_reticulata
ENSOMEG00000003441	zmat4a	76	75.556	ENSPPYG00000018540	ZMAT4	100	75.325	Pongo_abelii
ENSOMEG00000003441	zmat4a	76	73.894	ENSPCAG00000004820	ZMAT4	100	72.727	Procavia_capensis
ENSOMEG00000003441	zmat4a	76	75.446	ENSPCOG00000007717	ZMAT4	100	74.892	Propithecus_coquereli
ENSOMEG00000003441	zmat4a	65	77.202	ENSPVAG00000011393	ZMAT4	84	77.202	Pteropus_vampyrus
ENSOMEG00000003441	zmat4a	94	88.028	ENSPNYG00000006173	zmat4a	95	88.476	Pundamilia_nyererei
ENSOMEG00000003441	zmat4a	76	73.478	ENSPNAG00000023764	zmat4b	100	73.478	Pygocentrus_nattereri
ENSOMEG00000003441	zmat4a	87	88.593	ENSPNAG00000009604	zmat4a	100	87.452	Pygocentrus_nattereri
ENSOMEG00000003441	zmat4a	76	74.336	ENSRNOG00000042690	Zmat4	100	73.707	Rattus_norvegicus
ENSOMEG00000003441	zmat4a	76	75.556	ENSRBIG00000031887	ZMAT4	100	75.325	Rhinopithecus_bieti
ENSOMEG00000003441	zmat4a	76	75.556	ENSRROG00000040877	ZMAT4	100	75.325	Rhinopithecus_roxellana
ENSOMEG00000003441	zmat4a	76	75.556	ENSSBOG00000017391	ZMAT4	100	75.325	Saimiri_boliviensis_boliviensis
ENSOMEG00000003441	zmat4a	68	68.599	ENSSHAG00000011847	ZMAT4	100	67.476	Sarcophilus_harrisii
ENSOMEG00000003441	zmat4a	56	74.400	ENSSFOG00015015440	zmat4b	89	81.818	Scleropages_formosus
ENSOMEG00000003441	zmat4a	87	88.213	ENSSFOG00015013158	zmat4	100	87.072	Scleropages_formosus
ENSOMEG00000003441	zmat4a	87	95.094	ENSSMAG00000017693	zmat4a	100	93.363	Scophthalmus_maximus
ENSOMEG00000003441	zmat4a	87	95.057	ENSSDUG00000005878	zmat4a	100	93.536	Seriola_dumerili
ENSOMEG00000003441	zmat4a	87	95.057	ENSSLDG00000012934	zmat4a	100	93.536	Seriola_lalandi_dorsalis
ENSOMEG00000003441	zmat4a	76	69.264	ENSSARG00000003679	ZMAT4	100	69.264	Sorex_araneus
ENSOMEG00000003441	zmat4a	87	93.798	ENSSPAG00000021408	zmat4a	95	91.860	Stegastes_partitus
ENSOMEG00000003441	zmat4a	76	75.000	ENSSSCG00000007010	ZMAT4	100	74.459	Sus_scrofa
ENSOMEG00000003441	zmat4a	76	79.464	ENSTGUG00000005159	ZMAT4	99	79.018	Taeniopygia_guttata
ENSOMEG00000003441	zmat4a	89	91.481	ENSTRUG00000005170	zmat4a	100	84.488	Takifugu_rubripes
ENSOMEG00000003441	zmat4a	77	75.439	ENSTNIG00000018863	zmat4b	100	74.449	Tetraodon_nigroviridis
ENSOMEG00000003441	zmat4a	76	64.348	ENSTBEG00000016172	ZMAT4	100	64.069	Tupaia_belangeri
ENSOMEG00000003441	zmat4a	76	69.643	ENSTTRG00000009606	ZMAT4	100	68.831	Tursiops_truncatus
ENSOMEG00000003441	zmat4a	77	74.779	ENSUMAG00000025578	ZMAT4	100	74.009	Ursus_maritimus
ENSOMEG00000003441	zmat4a	76	65.652	ENSVPAG00000009783	ZMAT4	100	64.935	Vicugna_pacos
ENSOMEG00000003441	zmat4a	77	74.779	ENSVVUG00000020407	ZMAT4	100	74.026	Vulpes_vulpes
ENSOMEG00000003441	zmat4a	76	40.611	ENSXCOG00000010189	-	99	39.394	Xiphophorus_couchianus
ENSOMEG00000003441	zmat4a	87	90.114	ENSXMAG00000010461	zmat4a	100	89.354	Xiphophorus_maculatus