EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000003451 (Gene tree)
Gene ID: 112153220
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 8375 bases
Position: chrNVQA01000003.1:15409228-15417602
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000023362	zf-C2H2	PF00096.26	9.7e-61	1	9
ENSOMEP00000023362	zf-C2H2	PF00096.26	9.7e-61	2	9
ENSOMEP00000023362	zf-C2H2	PF00096.26	9.7e-61	3	9
ENSOMEP00000023362	zf-C2H2	PF00096.26	9.7e-61	4	9
ENSOMEP00000023362	zf-C2H2	PF00096.26	9.7e-61	5	9
ENSOMEP00000023362	zf-C2H2	PF00096.26	9.7e-61	6	9
ENSOMEP00000023362	zf-C2H2	PF00096.26	9.7e-61	7	9
ENSOMEP00000023362	zf-C2H2	PF00096.26	9.7e-61	8	9
ENSOMEP00000023362	zf-C2H2	PF00096.26	9.7e-61	9	9
ENSOMEP00000002496	zf-C2H2	PF00096.26	8e-60	1	8
ENSOMEP00000002496	zf-C2H2	PF00096.26	8e-60	2	8
ENSOMEP00000002496	zf-C2H2	PF00096.26	8e-60	3	8
ENSOMEP00000002496	zf-C2H2	PF00096.26	8e-60	4	8
ENSOMEP00000002496	zf-C2H2	PF00096.26	8e-60	5	8
ENSOMEP00000002496	zf-C2H2	PF00096.26	8e-60	6	8
ENSOMEP00000002496	zf-C2H2	PF00096.26	8e-60	7	8
ENSOMEP00000002496	zf-C2H2	PF00096.26	8e-60	8	8
ENSOMEP00000023362	zf-met	PF12874.7	1.8e-11	1	1
ENSOMEP00000002496	zf-met	PF12874.7	6.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000012417	-	3123	-	ENSOMEP00000023362	1040 (aa)	-	-
ENSOMET00000012399	-	4473	-	ENSOMEP00000002496	1146 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000003451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000003451's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000003451	-	70	39.891	ENSOMEG00000007495	-	85	37.838
ENSOMEG00000003451	-	65	48.837	ENSOMEG00000018735	-	99	48.837
ENSOMEG00000003451	-	66	42.157	ENSOMEG00000003577	-	92	42.157
ENSOMEG00000003451	-	67	43.192	ENSOMEG00000018508	-	97	43.192
ENSOMEG00000003451	-	58	44.882	ENSOMEG00000012403	-	84	44.882
ENSOMEG00000003451	-	70	37.931	ENSOMEG00000019149	-	68	37.931
ENSOMEG00000003451	-	81	47.619	ENSOMEG00000014676	-	97	47.619
ENSOMEG00000003451	-	67	40.439	ENSOMEG00000013868	-	87	40.439
ENSOMEG00000003451	-	76	38.318	ENSOMEG00000010744	-	97	38.318
ENSOMEG00000003451	-	50	37.647	ENSOMEG00000023792	-	68	33.708
ENSOMEG00000003451	-	70	39.850	ENSOMEG00000011566	-	97	39.850
ENSOMEG00000003451	-	64	37.705	ENSOMEG00000011664	-	74	37.462
ENSOMEG00000003451	-	69	42.466	ENSOMEG00000022975	-	71	34.769
ENSOMEG00000003451	-	65	41.727	ENSOMEG00000012366	-	84	41.727
ENSOMEG00000003451	-	65	38.235	ENSOMEG00000017797	-	89	38.235
ENSOMEG00000003451	-	65	45.977	ENSOMEG00000009440	-	89	38.202
ENSOMEG00000003451	-	75	40.598	ENSOMEG00000019379	-	92	40.598
ENSOMEG00000003451	-	76	38.235	ENSOMEG00000019519	-	94	40.513
ENSOMEG00000003451	-	65	34.008	ENSOMEG00000016779	-	75	34.008
ENSOMEG00000003451	-	66	32.000	ENSOMEG00000014386	-	59	31.270
ENSOMEG00000003451	-	65	41.699	ENSOMEG00000012245	-	51	41.699
ENSOMEG00000003451	-	66	37.255	ENSOMEG00000015669	znf574	67	37.255
ENSOMEG00000003451	-	73	37.629	ENSOMEG00000015149	GFI1B	85	37.629
ENSOMEG00000003451	-	72	44.248	ENSOMEG00000023820	-	96	44.444
ENSOMEG00000003451	-	70	41.284	ENSOMEG00000000376	si:ch211-216l23.1	99	37.681
ENSOMEG00000003451	-	66	41.096	ENSOMEG00000013198	-	92	41.096
ENSOMEG00000003451	-	80	30.612	ENSOMEG00000023331	-	96	40.458
ENSOMEG00000003451	-	65	45.378	ENSOMEG00000003372	-	99	34.250
ENSOMEG00000003451	-	65	35.390	ENSOMEG00000020893	-	96	35.390
ENSOMEG00000003451	-	66	41.919	ENSOMEG00000010371	-	99	41.509
ENSOMEG00000003451	-	74	37.313	ENSOMEG00000000630	-	91	37.313
ENSOMEG00000003451	-	65	38.492	ENSOMEG00000000829	-	84	38.492
ENSOMEG00000003451	-	65	37.952	ENSOMEG00000016747	-	82	36.203
ENSOMEG00000003451	-	67	34.332	ENSOMEG00000016295	-	79	37.278
ENSOMEG00000003451	-	67	38.000	ENSOMEG00000004514	-	59	38.000
ENSOMEG00000003451	-	68	37.602	ENSOMEG00000002639	-	99	37.158
ENSOMEG00000003451	-	66	38.247	ENSOMEG00000002622	-	88	35.714
ENSOMEG00000003451	-	65	41.270	ENSOMEG00000000196	-	88	41.270
ENSOMEG00000003451	-	67	42.105	ENSOMEG00000015103	-	92	40.075
ENSOMEG00000003451	-	72	35.583	ENSOMEG00000017673	-	81	35.583
ENSOMEG00000003451	-	66	38.686	ENSOMEG00000009377	-	70	38.686
ENSOMEG00000003451	-	66	42.342	ENSOMEG00000023310	-	88	42.342
ENSOMEG00000003451	-	65	39.130	ENSOMEG00000006208	-	95	39.130
ENSOMEG00000003451	-	66	33.770	ENSOMEG00000005143	prdm5	76	33.508
ENSOMEG00000003451	-	62	34.016	ENSOMEG00000011124	-	80	34.016
ENSOMEG00000003451	-	65	40.392	ENSOMEG00000007730	-	93	40.392
ENSOMEG00000003451	-	77	39.373	ENSOMEG00000018485	-	97	39.373
ENSOMEG00000003451	-	66	32.997	ENSOMEG00000012621	-	91	39.487
ENSOMEG00000003451	-	74	31.765	ENSOMEG00000006807	zbtb41	56	35.294
ENSOMEG00000003451	-	66	37.143	ENSOMEG00000021017	-	87	37.143
ENSOMEG00000003451	-	65	40.306	ENSOMEG00000012814	-	52	40.306
ENSOMEG00000003451	-	65	43.624	ENSOMEG00000008187	-	55	43.624
ENSOMEG00000003451	-	77	40.161	ENSOMEG00000016853	-	96	40.161
ENSOMEG00000003451	-	75	39.316	ENSOMEG00000010398	-	93	39.316
ENSOMEG00000003451	-	73	41.304	ENSOMEG00000008449	-	98	33.396
ENSOMEG00000003451	-	75	36.052	ENSOMEG00000006511	-	90	36.052
ENSOMEG00000003451	-	65	34.634	ENSOMEG00000014882	-	82	39.198
ENSOMEG00000003451	-	67	30.791	ENSOMEG00000010575	zgc:66448	97	33.333
ENSOMEG00000003451	-	72	37.008	ENSOMEG00000012539	-	97	33.731
ENSOMEG00000003451	-	68	42.365	ENSOMEG00000010906	-	61	42.466
ENSOMEG00000003451	-	77	42.742	ENSOMEG00000004087	-	99	40.132
ENSOMEG00000003451	-	62	39.855	ENSOMEG00000019352	-	70	39.855
ENSOMEG00000003451	-	65	37.538	ENSOMEG00000013386	-	89	35.542
ENSOMEG00000003451	-	65	37.427	ENSOMEG00000014364	-	90	36.946
ENSOMEG00000003451	-	67	40.741	ENSOMEG00000012220	e4f1	58	40.741
ENSOMEG00000003451	-	65	40.254	ENSOMEG00000012273	-	70	40.254
ENSOMEG00000003451	-	66	34.086	ENSOMEG00000000934	-	84	42.169
ENSOMEG00000003451	-	65	45.205	ENSOMEG00000022620	-	99	41.667
ENSOMEG00000003451	-	74	43.200	ENSOMEG00000000342	-	76	43.200
ENSOMEG00000003451	-	73	36.686	ENSOMEG00000017762	zbtb48	63	36.686
ENSOMEG00000003451	-	65	31.599	ENSOMEG00000019220	-	74	37.160
ENSOMEG00000003451	-	73	37.059	ENSOMEG00000019227	-	96	37.059
ENSOMEG00000003451	-	62	42.857	ENSOMEG00000020870	-	98	33.400
ENSOMEG00000003451	-	67	36.691	ENSOMEG00000011926	zbtb17	61	36.691
ENSOMEG00000003451	-	75	43.529	ENSOMEG00000021945	-	89	45.217
ENSOMEG00000003451	-	72	31.780	ENSOMEG00000006636	patz1	62	31.780
ENSOMEG00000003451	-	66	42.051	ENSOMEG00000012844	-	94	40.000
ENSOMEG00000003451	-	61	35.762	ENSOMEG00000016766	-	59	35.762
ENSOMEG00000003451	-	70	47.748	ENSOMEG00000021518	-	98	36.093
ENSOMEG00000003451	-	65	40.271	ENSOMEG00000015179	-	66	39.672
ENSOMEG00000003451	-	67	41.634	ENSOMEG00000009568	-	99	45.000
ENSOMEG00000003451	-	73	35.955	ENSOMEG00000010638	-	98	35.342
ENSOMEG00000003451	-	65	39.506	ENSOMEG00000021492	-	62	39.506
ENSOMEG00000003451	-	64	37.643	ENSOMEG00000021134	-	56	37.643
ENSOMEG00000003451	-	67	43.796	ENSOMEG00000006224	-	76	43.796
ENSOMEG00000003451	-	66	34.316	ENSOMEG00000012915	znf319b	92	31.655
ENSOMEG00000003451	-	66	48.315	ENSOMEG00000009816	-	96	52.000
ENSOMEG00000003451	-	83	33.741	ENSOMEG00000002268	-	95	39.721
ENSOMEG00000003451	-	65	41.778	ENSOMEG00000021417	-	67	41.778
ENSOMEG00000003451	-	66	42.857	ENSOMEG00000021998	-	58	42.857
ENSOMEG00000003451	-	65	43.277	ENSOMEG00000010745	-	89	43.277
ENSOMEG00000003451	-	66	44.545	ENSOMEG00000007699	-	95	48.684
ENSOMEG00000003451	-	77	41.254	ENSOMEG00000023652	-	99	43.697
ENSOMEG00000003451	-	75	41.341	ENSOMEG00000008365	-	90	41.341
ENSOMEG00000003451	-	54	43.363	ENSOMEG00000006301	-	89	43.363
ENSOMEG00000003451	-	68	34.312	ENSOMEG00000019853	-	97	34.932
ENSOMEG00000003451	-	66	33.600	ENSOMEG00000019336	-	92	34.586
ENSOMEG00000003451	-	65	44.828	ENSOMEG00000023777	-	96	44.828
ENSOMEG00000003451	-	65	39.711	ENSOMEG00000004527	-	88	39.711
ENSOMEG00000003451	-	67	42.697	ENSOMEG00000018691	-	96	37.879
ENSOMEG00000003451	-	67	41.007	ENSOMEG00000013244	-	98	41.007
ENSOMEG00000003451	-	65	38.235	ENSOMEG00000016808	-	84	40.000
ENSOMEG00000003451	-	65	36.100	ENSOMEG00000016463	-	76	34.340
ENSOMEG00000003451	-	65	39.608	ENSOMEG00000014973	-	99	38.209
ENSOMEG00000003451	-	55	42.537	ENSOMEG00000010418	-	51	42.537
ENSOMEG00000003451	-	65	44.068	ENSOMEG00000013158	-	72	44.068
ENSOMEG00000003451	-	68	31.806	ENSOMEG00000010300	-	93	31.806
ENSOMEG00000003451	-	73	41.228	ENSOMEG00000019179	-	97	37.709
ENSOMEG00000003451	-	66	40.964	ENSOMEG00000018498	-	95	40.964
ENSOMEG00000003451	-	62	45.872	ENSOMEG00000001598	-	76	45.872
ENSOMEG00000003451	-	65	42.500	ENSOMEG00000008352	-	74	42.500
ENSOMEG00000003451	-	67	41.696	ENSOMEG00000010752	-	59	41.696
ENSOMEG00000003451	-	73	42.424	ENSOMEG00000016026	-	86	50.769
ENSOMEG00000003451	-	65	41.912	ENSOMEG00000020951	-	94	40.800
ENSOMEG00000003451	-	66	37.952	ENSOMEG00000018279	-	89	37.952
ENSOMEG00000003451	-	74	38.176	ENSOMEG00000011681	-	84	38.176
ENSOMEG00000003451	-	65	39.331	ENSOMEG00000015591	-	65	40.000
ENSOMEG00000003451	-	66	43.796	ENSOMEG00000004077	-	88	43.796
ENSOMEG00000003451	-	70	46.377	ENSOMEG00000018562	-	99	46.377
ENSOMEG00000003451	-	73	41.048	ENSOMEG00000021676	-	88	41.048
ENSOMEG00000003451	-	66	42.246	ENSOMEG00000009243	-	67	42.246
ENSOMEG00000003451	-	66	33.167	ENSOMEG00000017245	-	77	32.494
ENSOMEG00000003451	-	59	40.149	ENSOMEG00000023774	-	66	40.149
ENSOMEG00000003451	-	68	42.727	ENSOMEG00000005578	-	76	42.727
ENSOMEG00000003451	-	63	38.361	ENSOMEG00000021840	-	85	38.361
ENSOMEG00000003451	-	67	45.588	ENSOMEG00000009071	-	94	40.462
ENSOMEG00000003451	-	73	40.836	ENSOMEG00000013842	-	77	40.836
ENSOMEG00000003451	-	68	37.217	ENSOMEG00000010952	-	90	37.217
ENSOMEG00000003451	-	66	40.559	ENSOMEG00000021556	-	64	40.559
ENSOMEG00000003451	-	65	39.803	ENSOMEG00000019437	-	82	39.375
ENSOMEG00000003451	-	71	40.328	ENSOMEG00000001622	-	94	40.328
ENSOMEG00000003451	-	65	43.709	ENSOMEG00000004586	-	96	39.556
ENSOMEG00000003451	-	67	37.260	ENSOMEG00000018871	-	63	37.260
ENSOMEG00000003451	-	51	45.946	ENSOMEG00000010941	-	63	45.946
ENSOMEG00000003451	-	59	36.759	ENSOMEG00000016285	-	72	36.759
ENSOMEG00000003451	-	65	42.051	ENSOMEG00000021506	-	87	41.624
ENSOMEG00000003451	-	65	44.196	ENSOMEG00000013677	-	92	37.231
ENSOMEG00000003451	-	57	49.000	ENSOMEG00000015147	-	79	49.000
ENSOMEG00000003451	-	65	41.441	ENSOMEG00000012263	-	70	41.441
ENSOMEG00000003451	-	73	44.286	ENSOMEG00000022915	-	99	44.526
ENSOMEG00000003451	-	68	39.384	ENSOMEG00000023744	-	99	39.744
ENSOMEG00000003451	-	69	41.176	ENSOMEG00000011876	-	83	40.136
ENSOMEG00000003451	-	75	40.828	ENSOMEG00000019114	-	54	38.889
ENSOMEG00000003451	-	62	36.199	ENSOMEG00000015640	-	76	36.530
ENSOMEG00000003451	-	67	41.011	ENSOMEG00000013894	-	56	41.011
ENSOMEG00000003451	-	66	39.111	ENSOMEG00000005156	-	93	39.111
ENSOMEG00000003451	-	68	34.503	ENSOMEG00000021420	-	64	33.721
ENSOMEG00000003451	-	65	35.948	ENSOMEG00000021399	-	62	37.013
ENSOMEG00000003451	-	65	40.357	ENSOMEG00000005839	-	90	40.357
ENSOMEG00000003451	-	66	43.434	ENSOMEG00000013449	-	86	49.231
ENSOMEG00000003451	-	68	41.897	ENSOMEG00000008445	-	90	41.897
ENSOMEG00000003451	-	65	43.713	ENSOMEG00000003401	-	64	47.561
ENSOMEG00000003451	-	66	38.305	ENSOMEG00000012614	-	56	38.305
ENSOMEG00000003451	-	67	45.238	ENSOMEG00000023102	-	86	41.532
ENSOMEG00000003451	-	67	35.088	ENSOMEG00000001063	znf384l	61	35.088
ENSOMEG00000003451	-	65	33.524	ENSOMEG00000019840	-	89	34.731
ENSOMEG00000003451	-	67	34.397	ENSOMEG00000021903	-	73	34.167
ENSOMEG00000003451	-	66	42.735	ENSOMEG00000023293	-	69	39.548
ENSOMEG00000003451	-	65	30.581	ENSOMEG00000022322	-	80	32.847
ENSOMEG00000003451	-	55	37.500	ENSOMEG00000019346	-	100	36.184
ENSOMEG00000003451	-	67	38.689	ENSOMEG00000018597	-	84	38.689
ENSOMEG00000003451	-	76	41.667	ENSOMEG00000018262	-	95	41.667
ENSOMEG00000003451	-	67	37.956	ENSOMEG00000016722	GFI1	52	37.956

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000003451	-	99	75.619	ENSAPOG00000003028	-	100	80.566	Acanthochromis_polyacanthus
ENSOMEG00000003451	-	98	75.257	ENSATEG00000023044	-	100	80.020	Anabas_testudineus
ENSOMEG00000003451	-	98	75.419	ENSACLG00000016841	-	98	80.074	Astatotilapia_calliptera
ENSOMEG00000003451	-	99	71.783	ENSCSEG00000004721	-	100	75.160	Cynoglossus_semilaevis
ENSOMEG00000003451	-	100	71.729	ENSFHEG00000003583	-	99	76.041	Fundulus_heteroclitus
ENSOMEG00000003451	-	94	33.266	ENSKMAG00000003402	-	97	33.669	Kryptolebias_marmoratus
ENSOMEG00000003451	-	98	74.440	ENSMAMG00000015670	-	98	78.785	Mastacembelus_armatus
ENSOMEG00000003451	-	98	75.419	ENSMZEG00005001313	-	98	80.074	Maylandia_zebra
ENSOMEG00000003451	-	65	32.245	ENSMMOG00000020682	-	95	32.245	Mola_mola
ENSOMEG00000003451	-	63	39.623	ENSMALG00000006709	-	67	31.532	Monopterus_albus
ENSOMEG00000003451	-	93	73.174	ENSMALG00000011860	-	91	73.174	Monopterus_albus
ENSOMEG00000003451	-	78	78.273	ENSNBRG00000010987	-	100	78.273	Neolamprologus_brichardi
ENSOMEG00000003451	-	68	76.358	ENSONIG00000017799	-	100	76.358	Oreochromis_niloticus
ENSOMEG00000003451	-	94	93.536	ENSORLG00000027418	-	100	93.536	Oryzias_latipes
ENSOMEG00000003451	-	94	91.782	ENSORLG00020008744	-	100	91.782	Oryzias_latipes_hni
ENSOMEG00000003451	-	94	93.259	ENSORLG00015007973	-	100	93.259	Oryzias_latipes_hsok
ENSOMEG00000003451	-	98	73.445	ENSPREG00000007135	-	98	77.268	Poecilia_reticulata
ENSOMEG00000003451	-	98	74.414	ENSSMAG00000005081	-	99	78.282	Scophthalmus_maximus
ENSOMEG00000003451	-	95	32.957	ENSSMAG00000002031	-	97	34.274	Scophthalmus_maximus
ENSOMEG00000003451	-	99	73.985	ENSSDUG00000016734	-	98	78.233	Seriola_dumerili
ENSOMEG00000003451	-	99	74.170	ENSSLDG00000004485	-	98	78.419	Seriola_lalandi_dorsalis
ENSOMEG00000003451	-	99	75.616	ENSSPAG00000003796	-	100	80.256	Stegastes_partitus
ENSOMEG00000003451	-	94	76.309	ENSTRUG00000025881	-	100	74.632	Takifugu_rubripes
ENSOMEG00000003451	-	99	62.125	ENSXMAG00000024762	-	100	60.181	Xiphophorus_maculatus