EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSOMEG00000003459 (Gene tree)
Gene ID
112160053
Gene Symbol
lig4
Alias
-
Full Name
ligase IV%2C DNA%2C ATP-dependent
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Minus strand
Length
2073 bases
Position
chrNVQA01000025.1:8782861-8784933
Accession
ZDB-GENE-070820-10
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000023373RNA_ligasePF09414.105.3e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000012380-2073-ENSOMEP00000023373690 (aa)--
Gene Model
Click here to download ENSOMEG00000003459's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000003459's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000003459lig49870.562ENSG00000174405LIG47371.753Homo_sapiens
ENSOMEG00000003459lig49990.684ENSAPOG00000000866lig47690.684Acanthochromis_polyacanthus
ENSOMEG00000003459lig49868.296ENSAMEG00000019685LIG47468.296Ailuropoda_melanoleuca
ENSOMEG00000003459lig49989.229ENSACIG00000018309lig47589.229Amphilophus_citrinellus
ENSOMEG00000003459lig49990.539ENSAOCG00000011768lig47690.539Amphiprion_ocellaris
ENSOMEG00000003459lig49990.539ENSAPEG00000017815lig47690.539Amphiprion_percula
ENSOMEG00000003459lig49990.233ENSATEG00000005583lig47590.233Anabas_testudineus
ENSOMEG00000003459lig49470.706ENSAPLG00000001673LIG47470.706Anas_platyrhynchos
ENSOMEG00000003459lig49972.434ENSACAG00000014566LIG47572.434Anolis_carolinensis
ENSOMEG00000003459lig49869.822ENSANAG00000012446LIG47469.822Aotus_nancymaae
ENSOMEG00000003459lig49989.374ENSACLG00000027051lig47589.374Astatotilapia_calliptera
ENSOMEG00000003459lig49982.849ENSAMXG00000008192lig47182.849Astyanax_mexicanus
ENSOMEG00000003459lig49869.527ENSBTAG00000015868LIG47969.527Bos_taurus
ENSOMEG00000003459lig49869.231ENSCJAG00000014689LIG47469.231Callithrix_jacchus
ENSOMEG00000003459lig49869.527ENSCAFG00000006031LIG47469.527Canis_familiaris
ENSOMEG00000003459lig49869.527ENSCAFG00020021230LIG47469.527Canis_lupus_dingo
ENSOMEG00000003459lig49869.527ENSCHIG00000001019LIG47469.527Capra_hircus
ENSOMEG00000003459lig49870.074ENSCAPG00000006284LIG47570.074Cavia_aperea
ENSOMEG00000003459lig49869.822ENSCPOG00000014266LIG47469.822Cavia_porcellus
ENSOMEG00000003459lig49869.822ENSCCAG00000019971LIG47469.822Cebus_capucinus
ENSOMEG00000003459lig49969.853ENSCATG00000021075LIG47569.853Cercocebus_atys
ENSOMEG00000003459lig49969.706ENSCLAG00000003376LIG47569.706Chinchilla_lanigera
ENSOMEG00000003459lig49969.853ENSCSAG00000000211LIG47569.853Chlorocebus_sabaeus
ENSOMEG00000003459lig49873.817ENSCPBG00000023291LIG47572.674Chrysemys_picta_bellii
ENSOMEG00000003459lig49148.428ENSCING00000009536-9648.428Ciona_intestinalis
ENSOMEG00000003459lig49846.460ENSCSAVG00000010336-8746.460Ciona_savignyi
ENSOMEG00000003459lig49969.853ENSCANG00000005805LIG47569.853Colobus_angolensis_palliatus
ENSOMEG00000003459lig49868.491ENSCGRG00001012072Lig47468.491Cricetulus_griseus_chok1gshd
ENSOMEG00000003459lig49868.491ENSCGRG00000013417Lig47468.491Cricetulus_griseus_crigri
ENSOMEG00000003459lig49986.900ENSCSEG00000013905lig47486.900Cynoglossus_semilaevis
ENSOMEG00000003459lig49989.520ENSCVAG00000007896lig47689.520Cyprinodon_variegatus
ENSOMEG00000003459lig49982.482ENSDARG00000060620lig47582.482Danio_rerio
ENSOMEG00000003459lig49869.424ENSDNOG00000000513LIG47469.424Dasypus_novemcinctus
ENSOMEG00000003459lig49870.710ENSDORG00000027303Lig47470.710Dipodomys_ordii
ENSOMEG00000003459lig49732.482FBgn0030506Lig47532.482Drosophila_melanogaster
ENSOMEG00000003459lig49866.914ENSETEG00000015563LIG47567.211Echinops_telfairi
ENSOMEG00000003459lig49947.157ENSEBUG00000014243lig47647.157Eptatretus_burgeri
ENSOMEG00000003459lig49868.639ENSEASG00005022073LIG47468.639Equus_asinus_asinus
ENSOMEG00000003459lig49868.491ENSECAG00000003257LIG47468.491Equus_caballus
ENSOMEG00000003459lig49884.786ENSELUG00000006787lig47484.934Esox_lucius
ENSOMEG00000003459lig49868.491ENSFCAG00000031985LIG47468.491Felis_catus
ENSOMEG00000003459lig49970.203ENSFALG00000004214LIG48470.203Ficedula_albicollis
ENSOMEG00000003459lig49868.787ENSFDAG00000008973LIG47468.787Fukomys_damarensis
ENSOMEG00000003459lig49988.501ENSFHEG00000007398lig46888.501Fundulus_heteroclitus
ENSOMEG00000003459lig49878.287ENSGMOG00000012843lig48778.287Gadus_morhua
ENSOMEG00000003459lig49969.287ENSGALG00000016854LIG47569.287Gallus_gallus
ENSOMEG00000003459lig410088.696ENSGAFG00000019779lig47388.696Gambusia_affinis
ENSOMEG00000003459lig410086.812ENSGACG00000014135lig47586.812Gasterosteus_aculeatus
ENSOMEG00000003459lig49870.414ENSGGOG00000027771LIG47470.414Gorilla_gorilla
ENSOMEG00000003459lig49989.229ENSHBUG00000006245lig47589.229Haplochromis_burtoni
ENSOMEG00000003459lig49869.527ENSHGLG00000000718LIG47469.527Heterocephalus_glaber_female
ENSOMEG00000003459lig49869.527ENSHGLG00100003265LIG47469.527Heterocephalus_glaber_male
ENSOMEG00000003459lig410084.203ENSHCOG00000012010lig47684.203Hippocampus_comes
ENSOMEG00000003459lig49979.622ENSIPUG00000013748lig47579.622Ictalurus_punctatus
ENSOMEG00000003459lig49870.414ENSSTOG00000024303LIG47470.414Ictidomys_tridecemlineatus
ENSOMEG00000003459lig49869.912ENSJJAG00000006750Lig47469.912Jaculus_jaculus
ENSOMEG00000003459lig49986.317ENSKMAG00000001149lig47586.317Kryptolebias_marmoratus
ENSOMEG00000003459lig48890.579ENSLBEG00000014578lig47390.579Labrus_bergylta
ENSOMEG00000003459lig49972.635ENSLACG00000003282LIG47572.635Latimeria_chalumnae
ENSOMEG00000003459lig49976.744ENSLOCG00000008901lig47476.744Lepisosteus_oculatus
ENSOMEG00000003459lig49967.344ENSLAFG00000031152LIG47567.344Loxodonta_africana
ENSOMEG00000003459lig49969.853ENSMFAG00000037235LIG47569.853Macaca_fascicularis
ENSOMEG00000003459lig49969.706ENSMMUG00000008874LIG47569.706Macaca_mulatta
ENSOMEG00000003459lig49969.853ENSMNEG00000023575LIG47569.853Macaca_nemestrina
ENSOMEG00000003459lig49969.853ENSMLEG00000026720LIG47569.853Mandrillus_leucophaeus
ENSOMEG00000003459lig49989.520ENSMAMG00000008472lig47589.520Mastacembelus_armatus
ENSOMEG00000003459lig49989.374ENSMZEG00005001855lig47589.374Maylandia_zebra
ENSOMEG00000003459lig49969.432ENSMGAG00000015532LIG47569.432Meleagris_gallopavo
ENSOMEG00000003459lig49868.639ENSMOCG00000019000Lig47468.639Microtus_ochrogaster
ENSOMEG00000003459lig49988.759ENSMMOG00000004390lig47588.759Mola_mola
ENSOMEG00000003459lig49868.741ENSMODG00000025064LIG47469.379Monodelphis_domestica
ENSOMEG00000003459lig49988.501ENSMALG00000008555lig47688.501Monopterus_albus
ENSOMEG00000003459lig49868.491MGP_CAROLIEiJ_G0030809Lig47468.491Mus_caroli
ENSOMEG00000003459lig49868.491ENSMUSG00000049717Lig47468.491Mus_musculus
ENSOMEG00000003459lig49868.639MGP_PahariEiJ_G0021270Lig47468.639Mus_pahari
ENSOMEG00000003459lig49868.787MGP_SPRETEiJ_G0031917Lig47468.787Mus_spretus
ENSOMEG00000003459lig49869.185ENSMPUG00000018675LIG47469.185Mustela_putorius_furo
ENSOMEG00000003459lig49869.231ENSMLUG00000001267LIG47469.231Myotis_lucifugus
ENSOMEG00000003459lig49869.675ENSNGAG00000013258Lig47469.675Nannospalax_galili
ENSOMEG00000003459lig49989.374ENSNBRG00000021252lig47589.374Neolamprologus_brichardi
ENSOMEG00000003459lig49870.118ENSNLEG00000007888LIG47470.118Nomascus_leucogenys
ENSOMEG00000003459lig49868.787ENSOPRG00000005765LIG47468.787Ochotona_princeps
ENSOMEG00000003459lig49869.778ENSODEG00000019683LIG47469.675Octodon_degus
ENSOMEG00000003459lig49989.374ENSONIG00000011969lig47489.374Oreochromis_niloticus
ENSOMEG00000003459lig49869.083ENSOCUG00000015734LIG47469.083Oryctolagus_cuniculus
ENSOMEG00000003459lig49993.343ENSORLG00000004041lig47693.343Oryzias_latipes
ENSOMEG00000003459lig49993.198ENSORLG00020019607lig47693.198Oryzias_latipes_hni
ENSOMEG00000003459lig49993.198ENSORLG00015017754lig47693.198Oryzias_latipes_hsok
ENSOMEG00000003459lig49968.705ENSOGAG00000032120LIG47568.705Otolemur_garnettii
ENSOMEG00000003459lig49869.527ENSOARG00000005590LIG48969.527Ovis_aries
ENSOMEG00000003459lig49870.266ENSPPAG00000032998LIG47470.266Pan_paniscus
ENSOMEG00000003459lig49868.935ENSPPRG00000017804LIG47468.935Panthera_pardus
ENSOMEG00000003459lig49868.787ENSPTIG00000010051LIG47468.787Panthera_tigris_altaica
ENSOMEG00000003459lig49870.414ENSPTRG00000006025LIG47470.414Pan_troglodytes
ENSOMEG00000003459lig49970.000ENSPANG00000007562LIG47570.000Papio_anubis
ENSOMEG00000003459lig410078.986ENSPKIG00000011645lig47578.986Paramormyrops_kingsleyae
ENSOMEG00000003459lig49972.287ENSPSIG00000001504LIG47572.287Pelodiscus_sinensis
ENSOMEG00000003459lig49786.161ENSPMGG00000013486lig47585.320Periophthalmus_magnuspinnatus
ENSOMEG00000003459lig49868.343ENSPEMG00000000076Lig47468.343Peromyscus_maniculatus_bairdii
ENSOMEG00000003459lig49968.082ENSPCIG00000021882LIG47568.082Phascolarctos_cinereus
ENSOMEG00000003459lig410089.275ENSPFOG00000000797lig47689.275Poecilia_formosa
ENSOMEG00000003459lig410089.275ENSPLAG00000001196lig47689.275Poecilia_latipinna
ENSOMEG00000003459lig410089.130ENSPMEG00000021353lig47689.130Poecilia_mexicana
ENSOMEG00000003459lig410088.841ENSPREG00000007323lig47688.841Poecilia_reticulata
ENSOMEG00000003459lig49869.822ENSPPYG00000005540LIG47469.822Pongo_abelii
ENSOMEG00000003459lig49968.824ENSPVAG00000016403LIG47568.824Pteropus_vampyrus
ENSOMEG00000003459lig49989.650ENSPNYG00000009660lig47589.650Pundamilia_nyererei
ENSOMEG00000003459lig49884.024ENSPNAG00000028069LIG47584.024Pygocentrus_nattereri
ENSOMEG00000003459lig49884.024ENSPNAG00000028056lig47584.024Pygocentrus_nattereri
ENSOMEG00000003459lig49968.182ENSRNOG00000014605Lig47568.182Rattus_norvegicus
ENSOMEG00000003459lig49968.676ENSRBIG00000039962LIG47468.676Rhinopithecus_bieti
ENSOMEG00000003459lig49969.706ENSRROG00000006040LIG47569.706Rhinopithecus_roxellana
ENSOMEG00000003459lig49869.822ENSSBOG00000019029LIG47469.822Saimiri_boliviensis_boliviensis
ENSOMEG00000003459lig49964.956ENSSHAG00000009525LIG47465.593Sarcophilus_harrisii
ENSOMEG00000003459lig410081.304ENSSFOG00015012835lig47681.304Scleropages_formosus
ENSOMEG00000003459lig49986.754ENSSMAG00000011267lig47786.754Scophthalmus_maximus
ENSOMEG00000003459lig49989.083ENSSDUG00000010343lig47589.083Seriola_dumerili
ENSOMEG00000003459lig49987.045ENSSLDG00000003239lig47587.045Seriola_lalandi_dorsalis
ENSOMEG00000003459lig49968.613ENSSARG00000006573LIG47568.613Sorex_araneus
ENSOMEG00000003459lig48974.026ENSSPUG00000002444LIG47374.026Sphenodon_punctatus
ENSOMEG00000003459lig49989.520ENSSPAG00000001609lig47589.520Stegastes_partitus
ENSOMEG00000003459lig49869.778ENSSSCG00000009540LIG47469.778Sus_scrofa
ENSOMEG00000003459lig49970.441ENSTGUG00000010795LIG47570.441Taeniopygia_guttata
ENSOMEG00000003459lig49986.608ENSTRUG00000009984lig47586.608Takifugu_rubripes
ENSOMEG00000003459lig49986.715ENSTNIG00000010348lig47687.007Tetraodon_nigroviridis
ENSOMEG00000003459lig49869.379ENSTBEG00000017741LIG47469.379Tupaia_belangeri
ENSOMEG00000003459lig49868.787ENSTTRG00000012660LIG47468.787Tursiops_truncatus
ENSOMEG00000003459lig49868.000ENSUAMG00000003773LIG47468.000Ursus_americanus
ENSOMEG00000003459lig49971.221ENSXETG00000002654lig47571.221Xenopus_tropicalis
ENSOMEG00000003459lig410089.130ENSXCOG00000017401lig47689.130Xiphophorus_couchianus
ENSOMEG00000003459lig410089.275ENSXMAG00000015142lig47689.275Xiphophorus_maculatus

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