EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000003504 (Gene tree)
Gene ID: -
Gene Symbol: mrm1
Alias: -
Full Name: mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 912 bases
Position: chrNVQA01000018.1:16656035-16656946
Accession: ZDB-GENE-060526-229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000023411	SpoU_sub_bind	PF08032.12	1.2e-15	1	1
ENSOMEP00000023411	SpoU_methylase	PF00588.19	1.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000012297	-	912	-	ENSOMEP00000023411	303 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000003504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000003504's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000003504	mrm1	98	45.277	ENSG00000278619	MRM1	80	45.277	Homo_sapiens
ENSOMEG00000003504	mrm1	99	76.000	ENSAPOG00000016309	mrm1	75	76.000	Acanthochromis_polyacanthus
ENSOMEG00000003504	mrm1	93	47.099	ENSAMEG00000008301	MRM1	78	47.099	Ailuropoda_melanoleuca
ENSOMEG00000003504	mrm1	98	74.832	ENSACIG00000012244	mrm1	77	74.832	Amphilophus_citrinellus
ENSOMEG00000003504	mrm1	99	76.667	ENSAOCG00000000362	mrm1	75	76.667	Amphiprion_ocellaris
ENSOMEG00000003504	mrm1	99	76.000	ENSAPEG00000004511	mrm1	75	76.000	Amphiprion_percula
ENSOMEG00000003504	mrm1	86	50.562	ENSAPLG00000006433	MRM1	86	51.685	Anas_platyrhynchos
ENSOMEG00000003504	mrm1	82	53.125	ENSACAG00000002573	MRM1	80	53.125	Anolis_carolinensis
ENSOMEG00000003504	mrm1	98	45.425	ENSANAG00000025500	MRM1	82	45.425	Aotus_nancymaae
ENSOMEG00000003504	mrm1	93	74.113	ENSACLG00000023745	mrm1	99	74.490	Astatotilapia_calliptera
ENSOMEG00000003504	mrm1	94	55.405	ENSAMXG00000030596	mrm1	74	55.405	Astyanax_mexicanus
ENSOMEG00000003504	mrm1	94	55.405	ENSAMXG00000007295	mrm1	74	55.405	Astyanax_mexicanus
ENSOMEG00000003504	mrm1	83	50.575	ENSBTAG00000010311	MRM1	72	50.575	Bos_taurus
ENSOMEG00000003504	mrm1	84	30.116	WBGene00012864	Y45F3A.9	86	30.116	Caenorhabditis_elegans
ENSOMEG00000003504	mrm1	98	45.752	ENSCJAG00000001023	MRM1	82	45.752	Callithrix_jacchus
ENSOMEG00000003504	mrm1	98	47.039	ENSCAFG00000017849	MRM1	82	47.039	Canis_familiaris
ENSOMEG00000003504	mrm1	98	46.865	ENSCAFG00020002377	MRM1	82	46.865	Canis_lupus_dingo
ENSOMEG00000003504	mrm1	83	49.808	ENSCHIG00000008558	MRM1	72	49.808	Capra_hircus
ENSOMEG00000003504	mrm1	90	47.703	ENSTSYG00000036380	MRM1	79	47.703	Carlito_syrichta
ENSOMEG00000003504	mrm1	89	47.619	ENSCPOG00000004283	MRM1	78	47.619	Cavia_porcellus
ENSOMEG00000003504	mrm1	98	44.771	ENSCCAG00000020032	MRM1	82	44.771	Cebus_capucinus
ENSOMEG00000003504	mrm1	96	47.508	ENSCATG00000041516	MRM1	80	47.508	Cercocebus_atys
ENSOMEG00000003504	mrm1	93	47.766	ENSCLAG00000010960	MRM1	77	47.766	Chinchilla_lanigera
ENSOMEG00000003504	mrm1	96	48.173	ENSCSAG00000006055	MRM1	80	48.173	Chlorocebus_sabaeus
ENSOMEG00000003504	mrm1	94	48.797	ENSCPBG00000009581	MRM1	63	48.797	Chrysemys_picta_bellii
ENSOMEG00000003504	mrm1	56	37.288	ENSCSAVG00000002478	-	76	37.288	Ciona_savignyi
ENSOMEG00000003504	mrm1	96	47.176	ENSCANG00000025543	MRM1	80	47.176	Colobus_angolensis_palliatus
ENSOMEG00000003504	mrm1	94	48.288	ENSCGRG00001001937	Mrm1	87	48.288	Cricetulus_griseus_chok1gshd
ENSOMEG00000003504	mrm1	94	48.288	ENSCGRG00000009593	Mrm1	87	48.288	Cricetulus_griseus_crigri
ENSOMEG00000003504	mrm1	99	65.563	ENSCSEG00000014575	mrm1	81	65.563	Cynoglossus_semilaevis
ENSOMEG00000003504	mrm1	95	70.139	ENSCVAG00000012104	mrm1	75	70.139	Cyprinodon_variegatus
ENSOMEG00000003504	mrm1	63	58.462	ENSDARG00000059658	mrm1	98	58.462	Danio_rerio
ENSOMEG00000003504	mrm1	94	39.175	ENSDNOG00000035159	MRM1	77	39.175	Dasypus_novemcinctus
ENSOMEG00000003504	mrm1	69	50.685	ENSDORG00000013267	Mrm1	93	50.685	Dipodomys_ordii
ENSOMEG00000003504	mrm1	76	47.347	ENSETEG00000000378	MRM1	88	47.347	Echinops_telfairi
ENSOMEG00000003504	mrm1	94	47.782	ENSEASG00005002123	MRM1	79	47.782	Equus_asinus_asinus
ENSOMEG00000003504	mrm1	94	46.599	ENSECAG00000025139	MRM1	79	46.599	Equus_caballus
ENSOMEG00000003504	mrm1	53	46.471	ENSEEUG00000013434	-	72	46.951	Erinaceus_europaeus
ENSOMEG00000003504	mrm1	94	65.862	ENSELUG00000012392	mrm1	66	65.862	Esox_lucius
ENSOMEG00000003504	mrm1	93	45.238	ENSFCAG00000031667	MRM1	78	45.238	Felis_catus
ENSOMEG00000003504	mrm1	52	56.051	ENSFALG00000005294	MRM1	98	56.051	Ficedula_albicollis
ENSOMEG00000003504	mrm1	73	49.780	ENSFDAG00000018545	MRM1	78	49.160	Fukomys_damarensis
ENSOMEG00000003504	mrm1	95	66.090	ENSFHEG00000005529	mrm1	82	65.677	Fundulus_heteroclitus
ENSOMEG00000003504	mrm1	78	52.049	ENSGALG00000039523	MRM1	96	52.049	Gallus_gallus
ENSOMEG00000003504	mrm1	99	69.667	ENSGAFG00000012959	mrm1	81	70.370	Gambusia_affinis
ENSOMEG00000003504	mrm1	84	74.219	ENSGACG00000004024	mrm1	97	74.219	Gasterosteus_aculeatus
ENSOMEG00000003504	mrm1	92	50.177	ENSGAGG00000000908	MRM1	70	50.177	Gopherus_agassizii
ENSOMEG00000003504	mrm1	98	45.277	ENSGGOG00000007979	MRM1	81	45.277	Gorilla_gorilla
ENSOMEG00000003504	mrm1	93	73.759	ENSHBUG00000004484	mrm1	99	74.061	Haplochromis_burtoni
ENSOMEG00000003504	mrm1	93	46.207	ENSHGLG00000008701	MRM1	78	46.207	Heterocephalus_glaber_female
ENSOMEG00000003504	mrm1	69	50.230	ENSHGLG00100012646	MRM1	75	49.327	Heterocephalus_glaber_male
ENSOMEG00000003504	mrm1	96	65.529	ENSHCOG00000003665	mrm1	82	65.529	Hippocampus_comes
ENSOMEG00000003504	mrm1	96	51.961	ENSIPUG00000022357	mrm1	78	52.614	Ictalurus_punctatus
ENSOMEG00000003504	mrm1	90	48.387	ENSSTOG00000002422	MRM1	84	48.387	Ictidomys_tridecemlineatus
ENSOMEG00000003504	mrm1	93	46.207	ENSJJAG00000010068	Mrm1	93	46.207	Jaculus_jaculus
ENSOMEG00000003504	mrm1	97	72.483	ENSLBEG00000009581	mrm1	99	72.483	Labrus_bergylta
ENSOMEG00000003504	mrm1	93	47.751	ENSLACG00000017664	MRM1	98	47.751	Latimeria_chalumnae
ENSOMEG00000003504	mrm1	96	57.966	ENSLOCG00000004945	mrm1	94	57.966	Lepisosteus_oculatus
ENSOMEG00000003504	mrm1	93	47.782	ENSLAFG00000012584	MRM1	85	47.782	Loxodonta_africana
ENSOMEG00000003504	mrm1	96	47.841	ENSMFAG00000032112	MRM1	81	47.841	Macaca_fascicularis
ENSOMEG00000003504	mrm1	96	47.841	ENSMMUG00000000622	MRM1	82	47.841	Macaca_mulatta
ENSOMEG00000003504	mrm1	96	47.841	ENSMNEG00000044557	MRM1	81	47.841	Macaca_nemestrina
ENSOMEG00000003504	mrm1	96	47.841	ENSMLEG00000031933	MRM1	80	47.841	Mandrillus_leucophaeus
ENSOMEG00000003504	mrm1	94	71.329	ENSMAMG00000007018	mrm1	99	71.572	Mastacembelus_armatus
ENSOMEG00000003504	mrm1	93	73.759	ENSMZEG00005008320	mrm1	99	74.150	Maylandia_zebra
ENSOMEG00000003504	mrm1	94	47.423	ENSMAUG00000020976	Mrm1	87	47.423	Mesocricetus_auratus
ENSOMEG00000003504	mrm1	94	48.639	ENSMICG00000004216	MRM1	83	48.639	Microcebus_murinus
ENSOMEG00000003504	mrm1	97	69.333	ENSMMOG00000001468	mrm1	90	69.333	Mola_mola
ENSOMEG00000003504	mrm1	88	45.848	ENSMODG00000003307	MRM1	64	45.848	Monodelphis_domestica
ENSOMEG00000003504	mrm1	96	72.355	ENSMALG00000014364	mrm1	98	72.848	Monopterus_albus
ENSOMEG00000003504	mrm1	93	47.766	MGP_CAROLIEiJ_G0016896	Mrm1	86	47.766	Mus_caroli
ENSOMEG00000003504	mrm1	93	47.766	ENSMUSG00000018405	Mrm1	86	47.766	Mus_musculus
ENSOMEG00000003504	mrm1	98	46.557	MGP_PahariEiJ_G0018026	Mrm1	89	46.557	Mus_pahari
ENSOMEG00000003504	mrm1	93	47.766	MGP_SPRETEiJ_G0017741	Mrm1	86	47.766	Mus_spretus
ENSOMEG00000003504	mrm1	84	48.679	ENSMPUG00000015063	MRM1	79	46.102	Mustela_putorius_furo
ENSOMEG00000003504	mrm1	98	46.753	ENSMLUG00000013208	MRM1	80	47.315	Myotis_lucifugus
ENSOMEG00000003504	mrm1	93	46.207	ENSNGAG00000019175	Mrm1	84	46.207	Nannospalax_galili
ENSOMEG00000003504	mrm1	93	74.113	ENSNBRG00000023533	mrm1	99	74.490	Neolamprologus_brichardi
ENSOMEG00000003504	mrm1	98	46.732	ENSNLEG00000002300	MRM1	81	46.732	Nomascus_leucogenys
ENSOMEG00000003504	mrm1	93	45.172	ENSOPRG00000012866	MRM1	80	45.172	Ochotona_princeps
ENSOMEG00000003504	mrm1	55	41.520	ENSODEG00000013042	-	51	41.520	Octodon_degus
ENSOMEG00000003504	mrm1	91	74.638	ENSONIG00000021236	mrm1	99	75.000	Oreochromis_niloticus
ENSOMEG00000003504	mrm1	89	45.848	ENSOCUG00000012149	MRM1	77	45.848	Oryctolagus_cuniculus
ENSOMEG00000003504	mrm1	100	90.429	ENSORLG00000025876	mrm1	100	90.429	Oryzias_latipes
ENSOMEG00000003504	mrm1	98	89.933	ENSORLG00020021701	mrm1	98	89.933	Oryzias_latipes_hni
ENSOMEG00000003504	mrm1	98	90.604	ENSORLG00015020702	mrm1	98	90.604	Oryzias_latipes_hsok
ENSOMEG00000003504	mrm1	89	49.638	ENSOGAG00000013785	MRM1	88	49.638	Otolemur_garnettii
ENSOMEG00000003504	mrm1	93	46.918	ENSOARG00000018616	MRM1	78	46.918	Ovis_aries
ENSOMEG00000003504	mrm1	98	45.752	ENSPPAG00000043135	MRM1	81	45.752	Pan_paniscus
ENSOMEG00000003504	mrm1	93	45.578	ENSPPRG00000023620	MRM1	78	45.578	Panthera_pardus
ENSOMEG00000003504	mrm1	83	47.308	ENSPTIG00000009829	MRM1	90	47.308	Panthera_tigris_altaica
ENSOMEG00000003504	mrm1	98	45.603	ENSPTRG00000009049	MRM1	80	45.603	Pan_troglodytes
ENSOMEG00000003504	mrm1	96	47.987	ENSPANG00000022126	MRM1	80	47.987	Papio_anubis
ENSOMEG00000003504	mrm1	94	55.709	ENSPKIG00000007654	mrm1	78	55.709	Paramormyrops_kingsleyae
ENSOMEG00000003504	mrm1	89	50.542	ENSPSIG00000017622	MRM1	98	50.542	Pelodiscus_sinensis
ENSOMEG00000003504	mrm1	95	64.527	ENSPMGG00000003905	mrm1	88	64.527	Periophthalmus_magnuspinnatus
ENSOMEG00000003504	mrm1	66	40.639	ENSPMAG00000000484	mrm1	100	40.639	Petromyzon_marinus
ENSOMEG00000003504	mrm1	94	45.392	ENSPCIG00000003352	MRM1	73	45.734	Phascolarctos_cinereus
ENSOMEG00000003504	mrm1	97	64.865	ENSPFOG00000018234	mrm1	73	63.300	Poecilia_formosa
ENSOMEG00000003504	mrm1	98	70.370	ENSPLAG00000020759	mrm1	75	70.370	Poecilia_latipinna
ENSOMEG00000003504	mrm1	98	70.370	ENSPMEG00000021744	mrm1	75	70.370	Poecilia_mexicana
ENSOMEG00000003504	mrm1	97	70.946	ENSPREG00000013224	mrm1	80	70.946	Poecilia_reticulata
ENSOMEG00000003504	mrm1	92	38.889	ENSPCAG00000011756	MRM1	78	38.889	Procavia_capensis
ENSOMEG00000003504	mrm1	94	48.136	ENSPCOG00000020871	MRM1	83	48.136	Propithecus_coquereli
ENSOMEG00000003504	mrm1	84	39.847	ENSPVAG00000011626	MRM1	73	39.847	Pteropus_vampyrus
ENSOMEG00000003504	mrm1	93	74.113	ENSPNYG00000000528	mrm1	99	74.403	Pundamilia_nyererei
ENSOMEG00000003504	mrm1	95	57.525	ENSPNAG00000014551	mrm1	73	57.525	Pygocentrus_nattereri
ENSOMEG00000003504	mrm1	93	48.797	ENSRNOG00000027901	Mrm1	86	48.797	Rattus_norvegicus
ENSOMEG00000003504	mrm1	96	47.508	ENSRBIG00000040494	MRM1	80	47.508	Rhinopithecus_bieti
ENSOMEG00000003504	mrm1	96	47.508	ENSRROG00000041704	MRM1	81	47.508	Rhinopithecus_roxellana
ENSOMEG00000003504	mrm1	98	44.444	ENSSBOG00000024145	MRM1	82	44.444	Saimiri_boliviensis_boliviensis
ENSOMEG00000003504	mrm1	94	57.986	ENSSFOG00015022117	mrm1	74	57.986	Scleropages_formosus
ENSOMEG00000003504	mrm1	99	70.297	ENSSMAG00000009657	mrm1	99	70.297	Scophthalmus_maximus
ENSOMEG00000003504	mrm1	99	73.616	ENSSDUG00000009089	mrm1	78	73.616	Seriola_dumerili
ENSOMEG00000003504	mrm1	99	72.964	ENSSLDG00000024141	mrm1	87	72.964	Seriola_lalandi_dorsalis
ENSOMEG00000003504	mrm1	95	46.780	ENSSPUG00000000265	MRM1	75	46.780	Sphenodon_punctatus
ENSOMEG00000003504	mrm1	80	49.603	ENSSSCG00000017691	MRM1	76	46.416	Sus_scrofa
ENSOMEG00000003504	mrm1	61	54.922	ENSTGUG00000008048	MRM1	98	54.922	Taeniopygia_guttata
ENSOMEG00000003504	mrm1	98	65.116	ENSTRUG00000011737	mrm1	80	65.116	Takifugu_rubripes
ENSOMEG00000003504	mrm1	97	65.886	ENSTNIG00000010088	mrm1	82	65.886	Tetraodon_nigroviridis
ENSOMEG00000003504	mrm1	58	42.781	ENSTBEG00000007237	-	82	43.094	Tupaia_belangeri
ENSOMEG00000003504	mrm1	83	48.669	ENSTTRG00000011984	MRM1	72	48.669	Tursiops_truncatus
ENSOMEG00000003504	mrm1	90	53.846	ENSUAMG00000023152	MRM1	85	46.809	Ursus_americanus
ENSOMEG00000003504	mrm1	98	47.541	ENSVVUG00000018420	MRM1	70	47.541	Vulpes_vulpes
ENSOMEG00000003504	mrm1	96	71.331	ENSXCOG00000003622	mrm1	81	71.331	Xiphophorus_couchianus
ENSOMEG00000003504	mrm1	98	71.044	ENSXMAG00000014890	mrm1	80	71.044	Xiphophorus_maculatus