EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000003526 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 43344 bases
Position: chrNVQA01000028.1:21136010-21179353
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000002575	zf-met	PF12874.7	8.6e-15	1	2
ENSOMEP00000002575	zf-met	PF12874.7	8.6e-15	2	2
ENSOMEP00000002575	zf-C2H2_jaz	PF12171.8	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000012256	-	2140	-	ENSOMEP00000002575	142 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000003526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000003526's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000003526	zgc:171482	86	70.492	ENSOMEG00000003441	zmat4a	59	70.400

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000003526	zgc:171482	91	94.574	ENSAPOG00000019970	zgc:171482	79	94.574	Acanthochromis_polyacanthus
ENSOMEG00000003526	zgc:171482	81	100.000	ENSACIG00000021512	zgc:171482	86	100.000	Amphilophus_citrinellus
ENSOMEG00000003526	zgc:171482	96	88.971	ENSAOCG00000000751	zgc:171482	100	88.971	Amphiprion_ocellaris
ENSOMEG00000003526	zgc:171482	96	91.912	ENSAPEG00000014154	zgc:171482	98	91.912	Amphiprion_percula
ENSOMEG00000003526	zgc:171482	81	98.261	ENSATEG00000001371	zgc:171482	79	92.800	Anabas_testudineus
ENSOMEG00000003526	zgc:171482	95	91.852	ENSACLG00000010511	zgc:171482	94	91.852	Astatotilapia_calliptera
ENSOMEG00000003526	zgc:171482	92	86.923	ENSAMXG00000002299	zgc:171482	98	86.923	Astyanax_mexicanus
ENSOMEG00000003526	zgc:171482	95	85.185	ENSCSEG00000006509	zgc:171482	88	85.185	Cynoglossus_semilaevis
ENSOMEG00000003526	zgc:171482	94	88.806	ENSCVAG00000013606	zgc:171482	80	88.806	Cyprinodon_variegatus
ENSOMEG00000003526	zgc:171482	86	88.525	ENSDARG00000074415	zgc:171482	91	88.525	Danio_rerio
ENSOMEG00000003526	zgc:171482	80	73.684	ENSELUG00000017517	-	60	85.393	Esox_lucius
ENSOMEG00000003526	zgc:171482	90	90.625	ENSELUG00000021817	zgc:171482	92	90.625	Esox_lucius
ENSOMEG00000003526	zgc:171482	92	95.385	ENSFHEG00000002233	zgc:171482	93	95.385	Fundulus_heteroclitus
ENSOMEG00000003526	zgc:171482	88	95.200	ENSGMOG00000010508	zgc:171482	79	95.200	Gadus_morhua
ENSOMEG00000003526	zgc:171482	83	98.305	ENSGAFG00000009398	zgc:171482	88	87.407	Gambusia_affinis
ENSOMEG00000003526	zgc:171482	88	95.200	ENSGACG00000007680	zgc:171482	80	95.200	Gasterosteus_aculeatus
ENSOMEG00000003526	zgc:171482	91	95.349	ENSHBUG00000023289	zgc:171482	97	95.349	Haplochromis_burtoni
ENSOMEG00000003526	zgc:171482	87	90.476	ENSHCOG00000018086	zgc:171482	94	90.476	Hippocampus_comes
ENSOMEG00000003526	zgc:171482	92	87.023	ENSIPUG00000000361	zgc:171482	91	87.023	Ictalurus_punctatus
ENSOMEG00000003526	zgc:171482	88	94.400	ENSKMAG00000005077	zgc:171482	79	94.400	Kryptolebias_marmoratus
ENSOMEG00000003526	zgc:171482	96	90.441	ENSLBEG00000023823	zgc:171482	97	90.441	Labrus_bergylta
ENSOMEG00000003526	zgc:171482	85	90.909	ENSLOCG00000008863	zgc:171482	77	90.909	Lepisosteus_oculatus
ENSOMEG00000003526	zgc:171482	99	88.652	ENSMAMG00000001031	zgc:171482	89	88.652	Mastacembelus_armatus
ENSOMEG00000003526	zgc:171482	83	90.678	ENSMZEG00005027721	zgc:171482	79	90.678	Maylandia_zebra
ENSOMEG00000003526	zgc:171482	89	96.063	ENSMMOG00000010523	zgc:171482	97	96.063	Mola_mola
ENSOMEG00000003526	zgc:171482	87	95.122	ENSMALG00000017883	zgc:171482	80	95.122	Monopterus_albus
ENSOMEG00000003526	zgc:171482	97	84.783	ENSNBRG00000021035	zgc:171482	99	84.783	Neolamprologus_brichardi
ENSOMEG00000003526	zgc:171482	88	95.200	ENSONIG00000018365	zgc:171482	78	94.444	Oreochromis_niloticus
ENSOMEG00000003526	zgc:171482	99	95.745	ENSORLG00000007607	zgc:171482	99	95.745	Oryzias_latipes
ENSOMEG00000003526	zgc:171482	99	95.035	ENSORLG00020003563	zgc:171482	99	95.035	Oryzias_latipes_hni
ENSOMEG00000003526	zgc:171482	99	95.035	ENSORLG00015008552	zgc:171482	99	95.035	Oryzias_latipes_hsok
ENSOMEG00000003526	zgc:171482	85	92.500	ENSPKIG00000015911	-	83	92.500	Paramormyrops_kingsleyae
ENSOMEG00000003526	zgc:171482	77	90.909	ENSPKIG00000016244	zgc:171482	86	85.833	Paramormyrops_kingsleyae
ENSOMEG00000003526	zgc:171482	95	96.000	ENSPMGG00000020230	zgc:171482	93	96.000	Periophthalmus_magnuspinnatus
ENSOMEG00000003526	zgc:171482	89	97.638	ENSPFOG00000001974	zgc:171482	79	97.638	Poecilia_formosa
ENSOMEG00000003526	zgc:171482	89	96.063	ENSPLAG00000003327	zgc:171482	79	96.063	Poecilia_latipinna
ENSOMEG00000003526	zgc:171482	91	96.899	ENSPMEG00000004988	zgc:171482	78	96.899	Poecilia_mexicana
ENSOMEG00000003526	zgc:171482	92	96.154	ENSPREG00000019241	zgc:171482	94	96.154	Poecilia_reticulata
ENSOMEG00000003526	zgc:171482	95	91.852	ENSPNYG00000007773	zgc:171482	94	91.852	Pundamilia_nyererei
ENSOMEG00000003526	zgc:171482	81	93.913	ENSPNAG00000007619	zgc:171482	79	92.437	Pygocentrus_nattereri
ENSOMEG00000003526	zgc:171482	80	90.265	ENSSFOG00015016149	zgc:171482	90	90.265	Scleropages_formosus
ENSOMEG00000003526	zgc:171482	87	86.179	ENSSFOG00015021238	zgc:171482	80	88.235	Scleropages_formosus
ENSOMEG00000003526	zgc:171482	96	93.431	ENSSMAG00000002715	zgc:171482	88	93.431	Scophthalmus_maximus
ENSOMEG00000003526	zgc:171482	95	91.111	ENSSDUG00000008773	zgc:171482	95	91.111	Seriola_dumerili
ENSOMEG00000003526	zgc:171482	95	91.111	ENSSLDG00000019510	zgc:171482	95	91.111	Seriola_lalandi_dorsalis
ENSOMEG00000003526	zgc:171482	87	97.581	ENSSPAG00000013724	zgc:171482	98	97.581	Stegastes_partitus
ENSOMEG00000003526	zgc:171482	89	92.126	ENSTRUG00000005705	zgc:171482	75	92.126	Takifugu_rubripes
ENSOMEG00000003526	zgc:171482	82	76.068	ENSTNIG00000008679	zgc:171482	80	76.068	Tetraodon_nigroviridis
ENSOMEG00000003526	zgc:171482	87	85.185	ENSXETG00000013525	zmat4	92	85.185	Xenopus_tropicalis
ENSOMEG00000003526	zgc:171482	83	87.395	ENSXMAG00000002641	zgc:171482	88	77.941	Xiphophorus_maculatus