EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000003712 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 5996 bases
Position: chrNVQA01000001.1:26909581-26915576
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000002760	RVT_1	PF00078.27	2.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000011953	-	5996	-	ENSOMEP00000002760	1480 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000003712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000003712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000003712	-	89	35.353	ENSOMEG00000009987	-	89	35.353
ENSOMEG00000003712	-	56	39.560	ENSOMEG00000012350	-	58	39.560
ENSOMEG00000003712	-	55	37.281	ENSOMEG00000001995	-	72	37.281
ENSOMEG00000003712	-	53	38.228	ENSOMEG00000017119	-	52	38.228
ENSOMEG00000003712	-	58	41.339	ENSOMEG00000011191	-	60	41.339
ENSOMEG00000003712	-	55	41.558	ENSOMEG00000009707	-	64	41.558
ENSOMEG00000003712	-	56	35.965	ENSOMEG00000007894	-	56	35.965
ENSOMEG00000003712	-	50	35.682	ENSOMEG00000002638	-	56	35.682
ENSOMEG00000003712	-	53	38.426	ENSOMEG00000022422	-	54	38.426
ENSOMEG00000003712	-	54	35.652	ENSOMEG00000023951	-	63	35.652
ENSOMEG00000003712	-	50	36.613	ENSOMEG00000007684	-	56	36.613
ENSOMEG00000003712	-	51	40.291	ENSOMEG00000013280	-	74	40.291
ENSOMEG00000003712	-	56	37.143	ENSOMEG00000012792	-	52	37.143
ENSOMEG00000003712	-	54	33.553	ENSOMEG00000021861	-	52	33.553
ENSOMEG00000003712	-	50	32.933	ENSOMEG00000015349	-	52	33.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000003712	-	75	52.021	ENSAPOG00000012135	-	99	52.021	Acanthochromis_polyacanthus
ENSOMEG00000003712	-	52	45.953	ENSAPOG00000013711	-	95	45.953	Acanthochromis_polyacanthus
ENSOMEG00000003712	-	63	58.140	ENSAPOG00000008045	-	98	58.140	Acanthochromis_polyacanthus
ENSOMEG00000003712	-	50	46.822	ENSAPOG00000013817	-	99	46.822	Acanthochromis_polyacanthus
ENSOMEG00000003712	-	100	69.452	ENSACLG00000017161	-	99	69.452	Astatotilapia_calliptera
ENSOMEG00000003712	-	78	39.297	ENSACLG00000002180	-	90	34.194	Astatotilapia_calliptera
ENSOMEG00000003712	-	96	33.616	ENSACLG00000013572	-	87	34.072	Astatotilapia_calliptera
ENSOMEG00000003712	-	91	35.176	ENSACLG00000014870	-	89	35.010	Astatotilapia_calliptera
ENSOMEG00000003712	-	54	74.564	ENSACLG00000007343	-	99	74.564	Astatotilapia_calliptera
ENSOMEG00000003712	-	60	45.151	ENSACLG00000000367	-	96	44.994	Astatotilapia_calliptera
ENSOMEG00000003712	-	73	41.092	ENSACLG00000010042	-	88	41.092	Astatotilapia_calliptera
ENSOMEG00000003712	-	67	48.177	ENSACLG00000001563	-	100	48.177	Astatotilapia_calliptera
ENSOMEG00000003712	-	99	64.252	ENSACLG00000009628	-	99	64.252	Astatotilapia_calliptera
ENSOMEG00000003712	-	61	40.982	ENSACLG00000018181	-	99	40.982	Astatotilapia_calliptera
ENSOMEG00000003712	-	99	48.126	ENSACLG00000026879	-	99	48.126	Astatotilapia_calliptera
ENSOMEG00000003712	-	54	38.147	ENSACLG00000015735	-	98	38.359	Astatotilapia_calliptera
ENSOMEG00000003712	-	91	35.314	ENSACLG00000017808	-	89	35.148	Astatotilapia_calliptera
ENSOMEG00000003712	-	89	43.861	ENSACLG00000014619	-	90	43.829	Astatotilapia_calliptera
ENSOMEG00000003712	-	89	43.829	ENSACLG00000019876	-	90	43.829	Astatotilapia_calliptera
ENSOMEG00000003712	-	91	31.198	ENSACLG00000018060	-	88	31.023	Astatotilapia_calliptera
ENSOMEG00000003712	-	50	53.731	ENSACLG00000008862	-	100	53.659	Astatotilapia_calliptera
ENSOMEG00000003712	-	72	46.225	ENSACLG00000027730	-	94	46.225	Astatotilapia_calliptera
ENSOMEG00000003712	-	89	36.172	ENSACLG00000027291	-	87	36.197	Astatotilapia_calliptera
ENSOMEG00000003712	-	91	35.245	ENSACLG00000000499	-	89	35.079	Astatotilapia_calliptera
ENSOMEG00000003712	-	99	64.453	ENSACLG00000025719	-	99	64.453	Astatotilapia_calliptera
ENSOMEG00000003712	-	99	64.185	ENSACLG00000024091	-	99	64.185	Astatotilapia_calliptera
ENSOMEG00000003712	-	90	33.820	ENSAMXG00000030902	-	87	34.981	Astyanax_mexicanus
ENSOMEG00000003712	-	97	34.643	ENSAMXG00000031698	-	85	35.857	Astyanax_mexicanus
ENSOMEG00000003712	-	83	41.368	ENSAMXG00000038169	-	95	41.368	Astyanax_mexicanus
ENSOMEG00000003712	-	55	34.529	ENSAMXG00000041112	-	78	33.682	Astyanax_mexicanus
ENSOMEG00000003712	-	87	34.877	ENSAMXG00000038578	-	99	34.877	Astyanax_mexicanus
ENSOMEG00000003712	-	89	40.899	ENSAMXG00000030987	-	89	40.307	Astyanax_mexicanus
ENSOMEG00000003712	-	89	35.562	ENSAMXG00000040892	-	87	35.562	Astyanax_mexicanus
ENSOMEG00000003712	-	54	43.864	ENSCPBG00000011626	-	98	43.864	Chrysemys_picta_bellii
ENSOMEG00000003712	-	53	41.169	ENSCVAG00000009912	-	99	41.169	Cyprinodon_variegatus
ENSOMEG00000003712	-	61	40.784	ENSELUG00000000948	-	79	40.784	Esox_lucius
ENSOMEG00000003712	-	65	45.646	ENSFHEG00000000971	-	91	44.687	Fundulus_heteroclitus
ENSOMEG00000003712	-	50	76.423	ENSGAFG00000009062	-	98	76.423	Gambusia_affinis
ENSOMEG00000003712	-	50	45.075	ENSGAGG00000023170	-	78	45.075	Gopherus_agassizii
ENSOMEG00000003712	-	62	45.289	ENSGAGG00000014450	-	84	45.289	Gopherus_agassizii
ENSOMEG00000003712	-	55	45.966	ENSGAGG00000012039	-	99	45.966	Gopherus_agassizii
ENSOMEG00000003712	-	55	45.966	ENSGAGG00000020521	-	99	45.966	Gopherus_agassizii
ENSOMEG00000003712	-	88	45.424	ENSGAGG00000022240	-	79	45.424	Gopherus_agassizii
ENSOMEG00000003712	-	58	44.758	ENSGAGG00000025282	-	84	44.758	Gopherus_agassizii
ENSOMEG00000003712	-	57	48.452	ENSIPUG00000000601	-	93	48.452	Ictalurus_punctatus
ENSOMEG00000003712	-	65	37.741	ENSMAMG00000018393	-	95	37.741	Mastacembelus_armatus
ENSOMEG00000003712	-	57	43.572	ENSMZEG00005000633	-	82	43.572	Maylandia_zebra
ENSOMEG00000003712	-	60	41.693	ENSORLG00000026676	-	95	41.693	Oryzias_latipes
ENSOMEG00000003712	-	51	74.737	ENSORLG00000025478	-	99	74.737	Oryzias_latipes
ENSOMEG00000003712	-	99	34.197	ENSORLG00000026873	-	87	35.586	Oryzias_latipes
ENSOMEG00000003712	-	97	48.714	ENSORLG00000030265	-	96	48.311	Oryzias_latipes
ENSOMEG00000003712	-	75	42.500	ENSORLG00000029874	-	70	42.500	Oryzias_latipes
ENSOMEG00000003712	-	99	64.726	ENSORLG00000026546	-	99	64.726	Oryzias_latipes
ENSOMEG00000003712	-	99	64.859	ENSORLG00000026665	-	99	64.859	Oryzias_latipes
ENSOMEG00000003712	-	98	49.131	ENSORLG00000027831	-	99	49.232	Oryzias_latipes
ENSOMEG00000003712	-	60	41.540	ENSORLG00000028632	-	87	41.450	Oryzias_latipes
ENSOMEG00000003712	-	90	34.128	ENSORLG00000029675	-	87	34.128	Oryzias_latipes
ENSOMEG00000003712	-	97	48.649	ENSORLG00000025739	-	96	48.378	Oryzias_latipes
ENSOMEG00000003712	-	99	64.859	ENSORLG00000024233	-	99	64.859	Oryzias_latipes
ENSOMEG00000003712	-	99	34.112	ENSORLG00000023181	-	87	35.493	Oryzias_latipes
ENSOMEG00000003712	-	99	34.047	ENSORLG00000026629	-	87	35.421	Oryzias_latipes
ENSOMEG00000003712	-	96	48.601	ENSORLG00000024904	-	92	49.855	Oryzias_latipes
ENSOMEG00000003712	-	97	48.612	ENSORLG00000024220	-	96	48.341	Oryzias_latipes
ENSOMEG00000003712	-	100	89.001	ENSORLG00000030542	-	100	89.001	Oryzias_latipes
ENSOMEG00000003712	-	100	89.136	ENSORLG00000028795	-	100	89.136	Oryzias_latipes
ENSOMEG00000003712	-	97	48.714	ENSORLG00000027568	-	96	48.378	Oryzias_latipes
ENSOMEG00000003712	-	100	89.069	ENSORLG00000028609	-	100	89.069	Oryzias_latipes
ENSOMEG00000003712	-	93	89.010	ENSORLG00000022369	-	98	89.010	Oryzias_latipes
ENSOMEG00000003712	-	95	48.542	ENSORLG00020020268	-	98	47.700	Oryzias_latipes_hni
ENSOMEG00000003712	-	96	48.464	ENSORLG00020014203	-	98	47.638	Oryzias_latipes_hni
ENSOMEG00000003712	-	90	51.189	ENSORLG00020001422	-	98	48.378	Oryzias_latipes_hni
ENSOMEG00000003712	-	97	48.850	ENSORLG00020008293	-	96	48.579	Oryzias_latipes_hni
ENSOMEG00000003712	-	96	48.464	ENSORLG00020003869	-	98	47.638	Oryzias_latipes_hni
ENSOMEG00000003712	-	100	89.136	ENSORLG00015017778	-	100	89.136	Oryzias_latipes_hsok
ENSOMEG00000003712	-	100	89.069	ENSORLG00015018878	-	100	89.069	Oryzias_latipes_hsok
ENSOMEG00000003712	-	87	43.168	ENSPSIG00000000767	-	95	43.168	Pelodiscus_sinensis
ENSOMEG00000003712	-	51	51.926	ENSPSIG00000013781	-	100	51.926	Pelodiscus_sinensis
ENSOMEG00000003712	-	89	43.067	ENSPSIG00000000489	-	91	43.255	Pelodiscus_sinensis
ENSOMEG00000003712	-	88	42.113	ENSPSIG00000000994	-	94	42.285	Pelodiscus_sinensis
ENSOMEG00000003712	-	73	46.373	ENSPSIG00000000353	-	91	46.373	Pelodiscus_sinensis
ENSOMEG00000003712	-	55	52.812	ENSPSIG00000001658	-	94	52.812	Pelodiscus_sinensis
ENSOMEG00000003712	-	53	60.536	ENSPMEG00000019585	-	99	60.536	Poecilia_mexicana
ENSOMEG00000003712	-	80	50.369	ENSPMEG00000016355	-	99	50.369	Poecilia_mexicana
ENSOMEG00000003712	-	93	33.743	ENSPREG00000004954	-	93	33.908	Poecilia_reticulata
ENSOMEG00000003712	-	84	40.842	ENSPREG00000000390	-	77	40.842	Poecilia_reticulata
ENSOMEG00000003712	-	54	41.098	ENSPNAG00000022277	-	95	41.098	Pygocentrus_nattereri
ENSOMEG00000003712	-	82	49.761	ENSSDUG00000002460	-	99	49.722	Seriola_dumerili
ENSOMEG00000003712	-	61	44.571	ENSSLDG00000004385	-	98	44.674	Seriola_lalandi_dorsalis
ENSOMEG00000003712	-	78	42.664	ENSXMAG00000021298	-	70	42.664	Xiphophorus_maculatus
ENSOMEG00000003712	-	84	49.804	ENSXMAG00000030100	-	91	49.687	Xiphophorus_maculatus
ENSOMEG00000003712	-	89	35.699	ENSXMAG00000021213	-	90	35.699	Xiphophorus_maculatus
ENSOMEG00000003712	-	79	39.528	ENSXMAG00000023503	-	77	39.528	Xiphophorus_maculatus
ENSOMEG00000003712	-	89	35.908	ENSXMAG00000026594	-	90	35.908	Xiphophorus_maculatus
ENSOMEG00000003712	-	95	49.650	ENSXMAG00000026031	-	98	48.111	Xiphophorus_maculatus
ENSOMEG00000003712	-	62	40.919	ENSXMAG00000030089	-	90	40.919	Xiphophorus_maculatus
ENSOMEG00000003712	-	79	39.528	ENSXMAG00000023079	-	77	39.528	Xiphophorus_maculatus
ENSOMEG00000003712	-	78	42.165	ENSXMAG00000023319	-	70	42.165	Xiphophorus_maculatus