EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000003848 (Gene tree)
Gene ID: 112160727
Gene Symbol: cstf3
Alias: -
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 11771 bases
Position: chrNVQA01000027.1:15074752-15086522
Accession: 112160727
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000002903	Suf	PF05843.14	2.1e-83	1	1
ENSOMEP00000023620	Suf	PF05843.14	8e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000011755	-	5172	-	ENSOMEP00000023620	682 (aa)	-	-
ENSOMET00000011726	-	5268	-	ENSOMEP00000002903	714 (aa)	XP_024151262	UPI000CF7BF64

Gene Model

Click here to download ENSOMEG00000003848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000003848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000003848	cstf3	100	90.098	ENSG00000176102	CSTF3	100	90.098	Homo_sapiens
ENSOMEG00000003848	cstf3	100	96.788	ENSAPOG00000014054	cstf3	100	96.788	Acanthochromis_polyacanthus
ENSOMEG00000003848	cstf3	99	90.665	ENSAMEG00000007187	CSTF3	98	90.665	Ailuropoda_melanoleuca
ENSOMEG00000003848	cstf3	91	92.456	ENSACIG00000005539	cstf3	100	92.456	Amphilophus_citrinellus
ENSOMEG00000003848	cstf3	100	96.508	ENSAOCG00000010930	cstf3	100	96.508	Amphiprion_ocellaris
ENSOMEG00000003848	cstf3	100	96.508	ENSAPEG00000007903	cstf3	100	96.508	Amphiprion_percula
ENSOMEG00000003848	cstf3	100	96.648	ENSATEG00000000190	cstf3	100	96.648	Anabas_testudineus
ENSOMEG00000003848	cstf3	99	90.806	ENSAPLG00000007217	CSTF3	99	90.806	Anas_platyrhynchos
ENSOMEG00000003848	cstf3	99	91.152	ENSACAG00000002823	CSTF3	99	91.152	Anolis_carolinensis
ENSOMEG00000003848	cstf3	100	90.098	ENSANAG00000020699	CSTF3	100	90.098	Aotus_nancymaae
ENSOMEG00000003848	cstf3	100	96.369	ENSACLG00000007820	cstf3	100	96.369	Astatotilapia_calliptera
ENSOMEG00000003848	cstf3	100	91.074	ENSAMXG00000014198	cstf3	100	91.353	Astyanax_mexicanus
ENSOMEG00000003848	cstf3	100	90.098	ENSBTAG00000008617	CSTF3	100	90.504	Bos_taurus
ENSOMEG00000003848	cstf3	97	48.440	WBGene00006307	suf-1	99	48.440	Caenorhabditis_elegans
ENSOMEG00000003848	cstf3	100	90.098	ENSCJAG00000005533	CSTF3	100	90.098	Callithrix_jacchus
ENSOMEG00000003848	cstf3	100	90.098	ENSCAFG00000007264	CSTF3	100	90.098	Canis_familiaris
ENSOMEG00000003848	cstf3	99	90.806	ENSCAFG00020002715	CSTF3	98	90.806	Canis_lupus_dingo
ENSOMEG00000003848	cstf3	98	89.331	ENSCHIG00000016418	CSTF3	100	90.080	Capra_hircus
ENSOMEG00000003848	cstf3	99	91.089	ENSTSYG00000000451	CSTF3	99	95.759	Carlito_syrichta
ENSOMEG00000003848	cstf3	83	89.822	ENSCAPG00000010958	CSTF3	98	87.707	Cavia_aperea
ENSOMEG00000003848	cstf3	100	90.237	ENSCPOG00000005545	CSTF3	100	90.463	Cavia_porcellus
ENSOMEG00000003848	cstf3	100	90.098	ENSCCAG00000024790	CSTF3	95	95.759	Cebus_capucinus
ENSOMEG00000003848	cstf3	100	90.098	ENSCATG00000007080	CSTF3	100	90.098	Cercocebus_atys
ENSOMEG00000003848	cstf3	100	90.098	ENSCLAG00000016179	CSTF3	100	90.098	Chinchilla_lanigera
ENSOMEG00000003848	cstf3	78	96.604	ENSCHOG00000002497	CSTF3	79	96.604	Choloepus_hoffmanni
ENSOMEG00000003848	cstf3	100	90.669	ENSCPBG00000006753	CSTF3	100	90.669	Chrysemys_picta_bellii
ENSOMEG00000003848	cstf3	99	62.117	ENSCING00000006401	-	98	62.256	Ciona_intestinalis
ENSOMEG00000003848	cstf3	99	61.538	ENSCSAVG00000004851	-	100	61.538	Ciona_savignyi
ENSOMEG00000003848	cstf3	100	90.098	ENSCANG00000035468	CSTF3	100	90.098	Colobus_angolensis_palliatus
ENSOMEG00000003848	cstf3	100	89.958	ENSCGRG00001014773	Cstf3	100	89.958	Cricetulus_griseus_chok1gshd
ENSOMEG00000003848	cstf3	100	89.958	ENSCGRG00000004142	Cstf3	100	89.958	Cricetulus_griseus_crigri
ENSOMEG00000003848	cstf3	100	96.224	ENSCSEG00000014283	cstf3	100	96.224	Cynoglossus_semilaevis
ENSOMEG00000003848	cstf3	100	96.089	ENSCVAG00000019739	cstf3	100	96.089	Cyprinodon_variegatus
ENSOMEG00000003848	cstf3	100	92.598	ENSDARG00000018904	cstf3	100	92.598	Danio_rerio
ENSOMEG00000003848	cstf3	99	90.948	ENSDNOG00000007366	CSTF3	99	90.948	Dasypus_novemcinctus
ENSOMEG00000003848	cstf3	99	82.937	ENSDORG00000005898	Cstf3	100	82.937	Dipodomys_ordii
ENSOMEG00000003848	cstf3	98	55.890	FBgn0003559	su(f)	98	55.890	Drosophila_melanogaster
ENSOMEG00000003848	cstf3	94	85.047	ENSETEG00000017097	CSTF3	90	85.047	Echinops_telfairi
ENSOMEG00000003848	cstf3	84	74.129	ENSEBUG00000015459	cstf3	96	74.129	Eptatretus_burgeri
ENSOMEG00000003848	cstf3	98	90.857	ENSEASG00005019884	CSTF3	96	95.759	Equus_asinus_asinus
ENSOMEG00000003848	cstf3	98	90.857	ENSECAG00000023338	CSTF3	96	95.759	Equus_caballus
ENSOMEG00000003848	cstf3	100	85.216	ENSEEUG00000015167	CSTF3	100	85.216	Erinaceus_europaeus
ENSOMEG00000003848	cstf3	100	94.134	ENSELUG00000023393	cstf3	100	94.134	Esox_lucius
ENSOMEG00000003848	cstf3	100	90.237	ENSFCAG00000030711	CSTF3	100	90.237	Felis_catus
ENSOMEG00000003848	cstf3	93	92.900	ENSFALG00000010764	CSTF3	100	89.708	Ficedula_albicollis
ENSOMEG00000003848	cstf3	100	90.237	ENSFDAG00000012082	CSTF3	100	90.237	Fukomys_damarensis
ENSOMEG00000003848	cstf3	100	95.950	ENSFHEG00000020623	cstf3	100	95.950	Fundulus_heteroclitus
ENSOMEG00000003848	cstf3	100	93.175	ENSGMOG00000012275	cstf3	100	93.175	Gadus_morhua
ENSOMEG00000003848	cstf3	100	89.694	ENSGALG00000011685	CSTF3	100	89.694	Gallus_gallus
ENSOMEG00000003848	cstf3	100	95.950	ENSGAFG00000002181	cstf3	100	95.950	Gambusia_affinis
ENSOMEG00000003848	cstf3	100	95.251	ENSGACG00000015997	cstf3	100	95.251	Gasterosteus_aculeatus
ENSOMEG00000003848	cstf3	100	90.669	ENSGAGG00000006200	CSTF3	100	90.669	Gopherus_agassizii
ENSOMEG00000003848	cstf3	99	85.149	ENSGGOG00000026591	CSTF3	95	90.848	Gorilla_gorilla
ENSOMEG00000003848	cstf3	100	96.229	ENSHBUG00000016656	cstf3	100	96.229	Haplochromis_burtoni
ENSOMEG00000003848	cstf3	100	90.237	ENSHGLG00000017834	CSTF3	100	90.237	Heterocephalus_glaber_female
ENSOMEG00000003848	cstf3	100	90.237	ENSHGLG00100018042	CSTF3	100	90.237	Heterocephalus_glaber_male
ENSOMEG00000003848	cstf3	99	92.756	ENSHCOG00000015218	cstf3	100	92.039	Hippocampus_comes
ENSOMEG00000003848	cstf3	100	92.039	ENSIPUG00000013170	CSTF3	100	92.039	Ictalurus_punctatus
ENSOMEG00000003848	cstf3	100	90.098	ENSSTOG00000013306	CSTF3	100	90.098	Ictidomys_tridecemlineatus
ENSOMEG00000003848	cstf3	99	80.618	ENSJJAG00000018430	Cstf3	99	80.618	Jaculus_jaculus
ENSOMEG00000003848	cstf3	100	95.391	ENSKMAG00000010916	cstf3	100	95.391	Kryptolebias_marmoratus
ENSOMEG00000003848	cstf3	100	95.391	ENSLBEG00000002306	cstf3	100	95.391	Labrus_bergylta
ENSOMEG00000003848	cstf3	100	89.385	ENSLACG00000017296	CSTF3	100	89.385	Latimeria_chalumnae
ENSOMEG00000003848	cstf3	100	92.329	ENSLOCG00000004415	cstf3	100	92.329	Lepisosteus_oculatus
ENSOMEG00000003848	cstf3	100	90.098	ENSLAFG00000008712	CSTF3	100	90.098	Loxodonta_africana
ENSOMEG00000003848	cstf3	100	90.098	ENSMFAG00000029516	CSTF3	100	90.098	Macaca_fascicularis
ENSOMEG00000003848	cstf3	100	90.098	ENSMMUG00000002542	CSTF3	100	90.098	Macaca_mulatta
ENSOMEG00000003848	cstf3	100	90.098	ENSMNEG00000021807	CSTF3	100	90.098	Macaca_nemestrina
ENSOMEG00000003848	cstf3	100	90.098	ENSMLEG00000039594	CSTF3	97	93.527	Mandrillus_leucophaeus
ENSOMEG00000003848	cstf3	100	96.089	ENSMAMG00000020423	cstf3	100	96.089	Mastacembelus_armatus
ENSOMEG00000003848	cstf3	100	96.369	ENSMZEG00005012082	cstf3	100	96.369	Maylandia_zebra
ENSOMEG00000003848	cstf3	100	89.554	ENSMGAG00000001383	CSTF3	100	89.554	Meleagris_gallopavo
ENSOMEG00000003848	cstf3	100	89.819	ENSMAUG00000002487	Cstf3	100	89.819	Mesocricetus_auratus
ENSOMEG00000003848	cstf3	100	90.098	ENSMICG00000004784	CSTF3	100	90.098	Microcebus_murinus
ENSOMEG00000003848	cstf3	100	89.958	ENSMOCG00000017583	Cstf3	100	89.958	Microtus_ochrogaster
ENSOMEG00000003848	cstf3	99	96.170	ENSMMOG00000016026	cstf3	94	96.170	Mola_mola
ENSOMEG00000003848	cstf3	100	79.777	ENSMODG00000025205	-	100	79.777	Monodelphis_domestica
ENSOMEG00000003848	cstf3	100	90.516	ENSMODG00000009745	-	100	90.516	Monodelphis_domestica
ENSOMEG00000003848	cstf3	100	96.089	ENSMALG00000012050	cstf3	100	96.089	Monopterus_albus
ENSOMEG00000003848	cstf3	100	89.958	MGP_CAROLIEiJ_G0024026	Cstf3	100	89.958	Mus_caroli
ENSOMEG00000003848	cstf3	100	89.958	ENSMUSG00000027176	Cstf3	100	89.958	Mus_musculus
ENSOMEG00000003848	cstf3	100	89.958	MGP_PahariEiJ_G0025464	Cstf3	100	89.958	Mus_pahari
ENSOMEG00000003848	cstf3	100	89.958	MGP_SPRETEiJ_G0024939	Cstf3	100	89.958	Mus_spretus
ENSOMEG00000003848	cstf3	100	89.958	ENSMPUG00000011457	CSTF3	100	89.958	Mustela_putorius_furo
ENSOMEG00000003848	cstf3	99	90.295	ENSMLUG00000003073	-	99	90.295	Myotis_lucifugus
ENSOMEG00000003848	cstf3	100	87.448	ENSMLUG00000026022	-	100	87.448	Myotis_lucifugus
ENSOMEG00000003848	cstf3	100	90.098	ENSNGAG00000010677	Cstf3	100	90.098	Nannospalax_galili
ENSOMEG00000003848	cstf3	91	97.271	ENSNBRG00000007345	cstf3	100	97.271	Neolamprologus_brichardi
ENSOMEG00000003848	cstf3	100	90.098	ENSNLEG00000017901	CSTF3	97	93.304	Nomascus_leucogenys
ENSOMEG00000003848	cstf3	77	89.675	ENSMEUG00000005640	-	100	89.675	Notamacropus_eugenii
ENSOMEG00000003848	cstf3	67	88.000	ENSOPRG00000000199	-	67	88.000	Ochotona_princeps
ENSOMEG00000003848	cstf3	100	77.080	ENSODEG00000006311	-	100	77.226	Octodon_degus
ENSOMEG00000003848	cstf3	100	90.098	ENSODEG00000016737	-	100	90.098	Octodon_degus
ENSOMEG00000003848	cstf3	100	96.369	ENSONIG00000005563	cstf3	100	96.369	Oreochromis_niloticus
ENSOMEG00000003848	cstf3	94	90.078	ENSOANG00000015140	CSTF3	100	89.538	Ornithorhynchus_anatinus
ENSOMEG00000003848	cstf3	100	89.819	ENSOCUG00000015417	CSTF3	100	89.819	Oryctolagus_cuniculus
ENSOMEG00000003848	cstf3	100	98.039	ENSORLG00000009762	cstf3	100	98.039	Oryzias_latipes
ENSOMEG00000003848	cstf3	100	98.179	ENSORLG00020005540	cstf3	100	98.179	Oryzias_latipes_hni
ENSOMEG00000003848	cstf3	100	98.039	ENSORLG00015003551	cstf3	100	98.039	Oryzias_latipes_hsok
ENSOMEG00000003848	cstf3	100	89.722	ENSOGAG00000010229	CSTF3	100	89.722	Otolemur_garnettii
ENSOMEG00000003848	cstf3	94	90.358	ENSOARG00000017271	CSTF3	99	90.358	Ovis_aries
ENSOMEG00000003848	cstf3	99	87.412	ENSPPAG00000027358	CSTF3	99	87.412	Pan_paniscus
ENSOMEG00000003848	cstf3	100	90.237	ENSPPRG00000016852	CSTF3	100	90.237	Panthera_pardus
ENSOMEG00000003848	cstf3	100	90.237	ENSPTIG00000008716	CSTF3	100	90.237	Panthera_tigris_altaica
ENSOMEG00000003848	cstf3	100	90.098	ENSPTRG00000003485	CSTF3	100	90.098	Pan_troglodytes
ENSOMEG00000003848	cstf3	100	90.098	ENSPANG00000013722	CSTF3	97	93.527	Papio_anubis
ENSOMEG00000003848	cstf3	100	91.620	ENSPKIG00000023648	cstf3	100	91.620	Paramormyrops_kingsleyae
ENSOMEG00000003848	cstf3	100	90.669	ENSPSIG00000009173	CSTF3	100	90.669	Pelodiscus_sinensis
ENSOMEG00000003848	cstf3	76	96.709	ENSPMGG00000000164	cstf3	99	96.709	Periophthalmus_magnuspinnatus
ENSOMEG00000003848	cstf3	100	89.958	ENSPEMG00000011481	Cstf3	100	89.958	Peromyscus_maniculatus_bairdii
ENSOMEG00000003848	cstf3	99	78.531	ENSPMAG00000007282	cstf3	98	78.843	Petromyzon_marinus
ENSOMEG00000003848	cstf3	99	89.124	ENSPCIG00000026406	-	100	90.560	Phascolarctos_cinereus
ENSOMEG00000003848	cstf3	100	75.905	ENSPCIG00000030419	-	90	76.184	Phascolarctos_cinereus
ENSOMEG00000003848	cstf3	100	95.950	ENSPFOG00000017239	cstf3	100	95.950	Poecilia_formosa
ENSOMEG00000003848	cstf3	100	96.089	ENSPLAG00000009456	cstf3	100	96.089	Poecilia_latipinna
ENSOMEG00000003848	cstf3	100	95.950	ENSPMEG00000010320	cstf3	100	95.950	Poecilia_mexicana
ENSOMEG00000003848	cstf3	100	95.810	ENSPREG00000013549	cstf3	100	95.810	Poecilia_reticulata
ENSOMEG00000003848	cstf3	100	90.098	ENSPPYG00000003375	CSTF3	100	90.098	Pongo_abelii
ENSOMEG00000003848	cstf3	71	94.425	ENSPCAG00000008025	-	70	94.425	Procavia_capensis
ENSOMEG00000003848	cstf3	100	85.077	ENSPCOG00000014417	CSTF3	100	85.077	Propithecus_coquereli
ENSOMEG00000003848	cstf3	100	85.077	ENSPVAG00000002350	CSTF3	100	85.077	Pteropus_vampyrus
ENSOMEG00000003848	cstf3	100	96.229	ENSPNYG00000018259	cstf3	100	96.229	Pundamilia_nyererei
ENSOMEG00000003848	cstf3	100	93.156	ENSPNAG00000020182	cstf3	100	93.156	Pygocentrus_nattereri
ENSOMEG00000003848	cstf3	91	89.600	ENSRNOG00000012089	Cstf3	100	89.600	Rattus_norvegicus
ENSOMEG00000003848	cstf3	99	89.392	ENSRBIG00000044258	CSTF3	100	90.080	Rhinopithecus_bieti
ENSOMEG00000003848	cstf3	100	90.098	ENSRROG00000043450	CSTF3	100	90.098	Rhinopithecus_roxellana
ENSOMEG00000003848	cstf3	100	90.098	ENSSBOG00000024764	CSTF3	98	95.759	Saimiri_boliviensis_boliviensis
ENSOMEG00000003848	cstf3	99	90.704	ENSSHAG00000018128	-	99	90.704	Sarcophilus_harrisii
ENSOMEG00000003848	cstf3	100	80.893	ENSSHAG00000003135	-	99	80.893	Sarcophilus_harrisii
ENSOMEG00000003848	cstf3	100	92.458	ENSSFOG00015022133	cstf3	100	92.458	Scleropages_formosus
ENSOMEG00000003848	cstf3	100	95.251	ENSSMAG00000002197	cstf3	100	95.251	Scophthalmus_maximus
ENSOMEG00000003848	cstf3	100	96.648	ENSSDUG00000020426	cstf3	100	96.648	Seriola_dumerili
ENSOMEG00000003848	cstf3	100	96.788	ENSSLDG00000025649	cstf3	100	96.788	Seriola_lalandi_dorsalis
ENSOMEG00000003848	cstf3	100	89.958	ENSSARG00000000391	CSTF3	100	89.958	Sorex_araneus
ENSOMEG00000003848	cstf3	96	90.449	ENSSPUG00000010546	CSTF3	100	90.449	Sphenodon_punctatus
ENSOMEG00000003848	cstf3	100	96.648	ENSSPAG00000004958	cstf3	100	96.648	Stegastes_partitus
ENSOMEG00000003848	cstf3	99	89.804	ENSSSCG00000040954	CSTF3	100	89.804	Sus_scrofa
ENSOMEG00000003848	cstf3	99	90.806	ENSTGUG00000005010	CSTF3	99	90.806	Taeniopygia_guttata
ENSOMEG00000003848	cstf3	100	94.274	ENSTRUG00000004959	cstf3	100	94.274	Takifugu_rubripes
ENSOMEG00000003848	cstf3	99	96.028	ENSTNIG00000013811	cstf3	98	96.028	Tetraodon_nigroviridis
ENSOMEG00000003848	cstf3	94	87.695	ENSTBEG00000001544	CSTF3	90	87.695	Tupaia_belangeri
ENSOMEG00000003848	cstf3	100	87.448	ENSTTRG00000016366	CSTF3	100	87.448	Tursiops_truncatus
ENSOMEG00000003848	cstf3	99	90.665	ENSUMAG00000018971	CSTF3	100	89.920	Ursus_maritimus
ENSOMEG00000003848	cstf3	100	89.958	ENSVPAG00000007800	CSTF3	100	89.958	Vicugna_pacos
ENSOMEG00000003848	cstf3	99	90.806	ENSVVUG00000014938	CSTF3	100	90.080	Vulpes_vulpes
ENSOMEG00000003848	cstf3	90	76.329	ENSXETG00000021399	cstf3	100	76.375	Xenopus_tropicalis
ENSOMEG00000003848	cstf3	66	41.458	ENSXETG00000017946	-	99	41.458	Xenopus_tropicalis
ENSOMEG00000003848	cstf3	91	96.148	ENSXCOG00000011741	cstf3	100	96.148	Xiphophorus_couchianus
ENSOMEG00000003848	cstf3	100	96.089	ENSXMAG00000009545	cstf3	100	96.089	Xiphophorus_maculatus