EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000003940 (Gene tree)
Gene ID: 112150598
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 11831 bases
Position: chrNVQA01000014.1:9604841-9616671
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000002984	MMR_HSR1	PF01926.23	2.4e-06	1	1
ENSOMEP00000002974	MMR_HSR1	PF01926.23	2.4e-06	1	1
ENSOMEP00000002990	MMR_HSR1	PF01926.23	3.1e-06	1	1
ENSOMEP00000003005	MMR_HSR1	PF01926.23	3.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000011607	-	1386	-	ENSOMEP00000002984	461 (aa)	-	-
ENSOMET00000011567	-	891	-	ENSOMEP00000003002	296 (aa)	-	-
ENSOMET00000011597	-	1341	-	ENSOMEP00000002974	446 (aa)	-	-
ENSOMET00000011582	-	2899	-	ENSOMEP00000002990	393 (aa)	-	-
ENSOMET00000011558	-	1335	-	ENSOMEP00000003005	444 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000003940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000003940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000003940	-	99	66.240	ENSOMEG00000004019	-	98	64.758
ENSOMEG00000003940	-	99	61.263	ENSOMEG00000003837	-	95	61.603
ENSOMEG00000003940	-	99	65.039	ENSOMEG00000000087	-	97	64.786
ENSOMEG00000003940	-	99	65.217	ENSOMEG00000004201	-	98	64.719
ENSOMEG00000003940	-	99	70.229	ENSOMEG00000004075	-	99	69.283
ENSOMEG00000003940	-	99	67.008	ENSOMEG00000004183	-	98	66.892
ENSOMEG00000003940	-	61	66.171	ENSOMEG00000003821	-	96	66.187
ENSOMEG00000003940	-	99	52.350	ENSOMEG00000004053	-	99	53.898
ENSOMEG00000003940	-	97	71.889	ENSOMEG00000004005	-	98	71.889
ENSOMEG00000003940	-	99	72.959	ENSOMEG00000003965	-	99	72.523
ENSOMEG00000003940	-	56	66.265	ENSOMEG00000020481	-	99	66.265

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000003940	-	99	48.724	ENSAPOG00000000010	zgc:153654	96	48.330	Acanthochromis_polyacanthus
ENSOMEG00000003940	-	100	62.850	ENSAPOG00000011126	-	91	62.838	Acanthochromis_polyacanthus
ENSOMEG00000003940	-	75	59.864	ENSACIG00000023205	-	96	59.864	Amphilophus_citrinellus
ENSOMEG00000003940	-	99	48.724	ENSACIG00000018021	zgc:153654	98	48.299	Amphilophus_citrinellus
ENSOMEG00000003940	-	100	61.069	ENSACIG00000009430	-	96	62.700	Amphilophus_citrinellus
ENSOMEG00000003940	-	100	63.104	ENSAOCG00000008818	si:ch211-197g15.10	98	63.004	Amphiprion_ocellaris
ENSOMEG00000003940	-	99	47.449	ENSAOCG00000011919	zgc:153654	93	47.166	Amphiprion_ocellaris
ENSOMEG00000003940	-	99	46.939	ENSAPEG00000012978	zgc:153654	94	46.548	Amphiprion_percula
ENSOMEG00000003940	-	100	62.595	ENSAPEG00000006547	si:ch211-197g15.10	97	62.472	Amphiprion_percula
ENSOMEG00000003940	-	99	56.266	ENSATEG00000016831	-	96	56.081	Anabas_testudineus
ENSOMEG00000003940	-	99	60.899	ENSATEG00000016836	-	97	60.899	Anabas_testudineus
ENSOMEG00000003940	-	99	48.214	ENSATEG00000008195	zgc:153654	96	47.768	Anabas_testudineus
ENSOMEG00000003940	-	99	59.101	ENSATEG00000016811	-	98	59.101	Anabas_testudineus
ENSOMEG00000003940	-	99	55.982	ENSATEG00000016818	-	96	55.982	Anabas_testudineus
ENSOMEG00000003940	-	99	49.490	ENSACLG00000009420	zgc:153654	93	48.423	Astatotilapia_calliptera
ENSOMEG00000003940	-	100	61.832	ENSACLG00000022167	-	98	62.162	Astatotilapia_calliptera
ENSOMEG00000003940	-	100	62.087	ENSACLG00000013499	-	98	61.486	Astatotilapia_calliptera
ENSOMEG00000003940	-	100	62.087	ENSACLG00000022141	-	95	62.955	Astatotilapia_calliptera
ENSOMEG00000003940	-	99	61.400	ENSACLG00000021969	-	98	61.591	Astatotilapia_calliptera
ENSOMEG00000003940	-	100	47.236	ENSAMXG00000031541	-	99	47.228	Astyanax_mexicanus
ENSOMEG00000003940	-	100	44.221	ENSAMXG00000002119	-	98	44.843	Astyanax_mexicanus
ENSOMEG00000003940	-	99	45.340	ENSCPBG00000016962	-	97	45.067	Chrysemys_picta_bellii
ENSOMEG00000003940	-	99	58.629	ENSCVAG00000010378	-	98	58.166	Cyprinodon_variegatus
ENSOMEG00000003940	-	99	46.875	ENSCVAG00000013437	zgc:153654	93	46.875	Cyprinodon_variegatus
ENSOMEG00000003940	-	99	59.234	ENSCVAG00000015674	-	98	59.101	Cyprinodon_variegatus
ENSOMEG00000003940	-	99	59.079	ENSCVAG00000000409	-	94	59.318	Cyprinodon_variegatus
ENSOMEG00000003940	-	99	58.974	ENSCVAG00000000405	-	97	58.652	Cyprinodon_variegatus
ENSOMEG00000003940	-	74	54.819	ENSCVAG00000004989	-	100	54.303	Cyprinodon_variegatus
ENSOMEG00000003940	-	100	47.727	ENSDARG00000092883	si:dkey-193b15.5	99	48.115	Danio_rerio
ENSOMEG00000003940	-	65	48.630	ENSDARG00000094747	si:ch211-197g15.6	88	48.148	Danio_rerio
ENSOMEG00000003940	-	100	47.716	ENSDARG00000009673	si:ch211-197g15.6	90	48.416	Danio_rerio
ENSOMEG00000003940	-	99	46.985	ENSDARG00000071361	si:ch211-197g15.10	97	46.711	Danio_rerio
ENSOMEG00000003940	-	98	46.347	ENSDARG00000094984	si:ch211-197g15.8	98	46.259	Danio_rerio
ENSOMEG00000003940	-	100	45.960	ENSDARG00000002293	si:ch211-197g15.6	97	45.880	Danio_rerio
ENSOMEG00000003940	-	99	48.223	ENSDARG00000071355	si:ch211-197g15.7	96	52.756	Danio_rerio
ENSOMEG00000003940	-	99	48.485	ENSDARG00000060322	zgc:153654	97	48.198	Danio_rerio
ENSOMEG00000003940	-	100	47.607	ENSELUG00000008265	zgc:153654	97	48.222	Esox_lucius
ENSOMEG00000003940	-	99	52.796	ENSELUG00000013242	si:ch211-197g15.10	99	52.796	Esox_lucius
ENSOMEG00000003940	-	99	46.819	ENSFHEG00000009844	zgc:153654	95	47.072	Fundulus_heteroclitus
ENSOMEG00000003940	-	100	59.288	ENSFHEG00000013876	-	98	58.202	Fundulus_heteroclitus
ENSOMEG00000003940	-	60	56.180	ENSFHEG00000019876	-	97	56.180	Fundulus_heteroclitus
ENSOMEG00000003940	-	100	60.051	ENSFHEG00000019903	-	98	59.326	Fundulus_heteroclitus
ENSOMEG00000003940	-	86	44.643	ENSGMOG00000012872	-	99	44.643	Gadus_morhua
ENSOMEG00000003940	-	99	48.601	ENSGAFG00000019143	zgc:153654	90	48.869	Gambusia_affinis
ENSOMEG00000003940	-	99	59.847	ENSGAFG00000007761	-	98	58.652	Gambusia_affinis
ENSOMEG00000003940	-	100	55.980	ENSGACG00000007958	si:ch211-197g15.10	98	55.631	Gasterosteus_aculeatus
ENSOMEG00000003940	-	99	46.819	ENSGACG00000009755	zgc:153654	96	46.847	Gasterosteus_aculeatus
ENSOMEG00000003940	-	99	45.088	ENSGAGG00000022623	-	97	44.494	Gopherus_agassizii
ENSOMEG00000003940	-	100	61.832	ENSHBUG00000018097	-	98	61.486	Haplochromis_burtoni
ENSOMEG00000003940	-	99	49.109	ENSHBUG00000008124	zgc:153654	93	48.090	Haplochromis_burtoni
ENSOMEG00000003940	-	100	62.850	ENSHBUG00000001391	-	98	63.288	Haplochromis_burtoni
ENSOMEG00000003940	-	100	46.599	ENSIPUG00000014380	zgc:153654	98	47.333	Ictalurus_punctatus
ENSOMEG00000003940	-	97	45.638	ENSIPUG00000025096	si:ch211-197g15.6	93	45.575	Ictalurus_punctatus
ENSOMEG00000003940	-	99	49.231	ENSKMAG00000013818	zgc:153654	93	47.748	Kryptolebias_marmoratus
ENSOMEG00000003940	-	100	57.506	ENSKMAG00000004691	si:ch211-197g15.10	100	60.280	Kryptolebias_marmoratus
ENSOMEG00000003940	-	99	57.545	ENSLBEG00000027620	si:ch211-197g15.10	97	57.528	Labrus_bergylta
ENSOMEG00000003940	-	100	59.137	ENSMAMG00000006478	-	97	59.259	Mastacembelus_armatus
ENSOMEG00000003940	-	99	48.092	ENSMAMG00000002775	zgc:153654	93	47.640	Mastacembelus_armatus
ENSOMEG00000003940	-	75	60.135	ENSMAMG00000006527	-	97	60.204	Mastacembelus_armatus
ENSOMEG00000003940	-	99	60.102	ENSMAMG00000006432	-	96	60.739	Mastacembelus_armatus
ENSOMEG00000003940	-	59	56.767	ENSMAMG00000006464	-	96	56.767	Mastacembelus_armatus
ENSOMEG00000003940	-	97	62.105	ENSMZEG00005016305	-	95	62.963	Maylandia_zebra
ENSOMEG00000003940	-	100	61.832	ENSMZEG00005016298	-	95	62.727	Maylandia_zebra
ENSOMEG00000003940	-	100	61.832	ENSMZEG00005009847	-	92	61.124	Maylandia_zebra
ENSOMEG00000003940	-	99	61.625	ENSMZEG00005016191	-	98	61.818	Maylandia_zebra
ENSOMEG00000003940	-	99	48.990	ENSMZEG00005000213	zgc:153654	93	47.991	Maylandia_zebra
ENSOMEG00000003940	-	99	46.102	ENSMMOG00000008706	zgc:153654	95	46.102	Mola_mola
ENSOMEG00000003940	-	100	44.889	ENSMALG00000010184	zgc:153654	97	45.536	Monopterus_albus
ENSOMEG00000003940	-	100	59.288	ENSMALG00000017812	-	98	59.101	Monopterus_albus
ENSOMEG00000003940	-	99	60.668	ENSNBRG00000021612	-	97	61.432	Neolamprologus_brichardi
ENSOMEG00000003940	-	99	62.468	ENSNBRG00000021762	-	98	63.182	Neolamprologus_brichardi
ENSOMEG00000003940	-	100	60.135	ENSNBRG00000021454	-	97	61.327	Neolamprologus_brichardi
ENSOMEG00000003940	-	99	49.873	ENSNBRG00000021369	zgc:153654	93	48.539	Neolamprologus_brichardi
ENSOMEG00000003940	-	99	59.847	ENSNBRG00000022795	-	98	59.955	Neolamprologus_brichardi
ENSOMEG00000003940	-	99	60.899	ENSNBRG00000021865	-	96	60.850	Neolamprologus_brichardi
ENSOMEG00000003940	-	100	61.209	ENSONIG00000012749	-	96	60.870	Oreochromis_niloticus
ENSOMEG00000003940	-	100	61.323	ENSONIG00000014147	-	98	61.036	Oreochromis_niloticus
ENSOMEG00000003940	-	99	48.855	ENSONIG00000001120	zgc:153654	94	47.661	Oreochromis_niloticus
ENSOMEG00000003940	-	99	66.752	ENSORLG00000000696	-	98	65.766	Oryzias_latipes
ENSOMEG00000003940	-	99	73.146	ENSORLG00000030184	-	100	72.523	Oryzias_latipes
ENSOMEG00000003940	-	99	64.194	ENSORLG00000008608	-	98	63.288	Oryzias_latipes
ENSOMEG00000003940	-	99	71.867	ENSORLG00000027011	-	99	71.982	Oryzias_latipes
ENSOMEG00000003940	-	99	73.657	ENSORLG00020014470	-	100	73.198	Oryzias_latipes_hni
ENSOMEG00000003940	-	99	66.496	ENSORLG00020014451	-	98	64.865	Oryzias_latipes_hni
ENSOMEG00000003940	-	76	68.771	ENSORLG00020014413	-	97	68.771	Oryzias_latipes_hni
ENSOMEG00000003940	-	57	68.651	ENSORLG00015009911	-	100	69.600	Oryzias_latipes_hsok
ENSOMEG00000003940	-	99	73.913	ENSORLG00015009930	-	100	73.423	Oryzias_latipes_hsok
ENSOMEG00000003940	-	99	63.753	ENSORLG00015015397	-	96	63.146	Oryzias_latipes_hsok
ENSOMEG00000003940	-	99	65.039	ENSORLG00015009849	-	98	64.091	Oryzias_latipes_hsok
ENSOMEG00000003940	-	99	65.729	ENSORLG00015000293	-	98	64.640	Oryzias_latipes_hsok
ENSOMEG00000003940	-	99	63.171	ENSORLG00015009699	-	98	62.613	Oryzias_latipes_hsok
ENSOMEG00000003940	-	60	47.955	ENSPKIG00000020074	-	91	47.955	Paramormyrops_kingsleyae
ENSOMEG00000003940	-	59	39.474	ENSPKIG00000018649	-	92	39.259	Paramormyrops_kingsleyae
ENSOMEG00000003940	-	62	42.960	ENSPKIG00000020057	-	94	42.705	Paramormyrops_kingsleyae
ENSOMEG00000003940	-	60	43.494	ENSPKIG00000018512	-	89	43.494	Paramormyrops_kingsleyae
ENSOMEG00000003940	-	59	37.736	ENSPKIG00000020102	-	98	37.736	Paramormyrops_kingsleyae
ENSOMEG00000003940	-	60	47.925	ENSPKIG00000018686	-	93	45.556	Paramormyrops_kingsleyae
ENSOMEG00000003940	-	60	37.868	ENSPKIG00000018532	-	89	38.321	Paramormyrops_kingsleyae
ENSOMEG00000003940	-	60	45.318	ENSPKIG00000018587	-	90	45.018	Paramormyrops_kingsleyae
ENSOMEG00000003940	-	99	41.624	ENSPSIG00000002607	-	96	41.364	Pelodiscus_sinensis
ENSOMEG00000003940	-	76	39.604	ENSPMGG00000000928	zgc:153654	92	40.594	Periophthalmus_magnuspinnatus
ENSOMEG00000003940	-	99	40.265	ENSPMAG00000000471	-	98	40.265	Petromyzon_marinus
ENSOMEG00000003940	-	100	59.288	ENSPFOG00000000111	-	98	59.234	Poecilia_formosa
ENSOMEG00000003940	-	99	56.203	ENSPFOG00000022999	-	100	56.027	Poecilia_formosa
ENSOMEG00000003940	-	99	47.355	ENSPFOG00000014250	zgc:153654	96	47.098	Poecilia_formosa
ENSOMEG00000003940	-	62	58.484	ENSPFOG00000000122	-	97	58.555	Poecilia_formosa
ENSOMEG00000003940	-	99	58.838	ENSPFOG00000011182	-	98	57.556	Poecilia_formosa
ENSOMEG00000003940	-	60	63.060	ENSPFOG00000015594	-	97	62.007	Poecilia_formosa
ENSOMEG00000003940	-	99	59.335	ENSPLAG00000021480	-	98	57.978	Poecilia_latipinna
ENSOMEG00000003940	-	99	47.959	ENSPLAG00000007998	zgc:153654	93	47.630	Poecilia_latipinna
ENSOMEG00000003940	-	100	58.779	ENSPLAG00000001307	-	97	58.784	Poecilia_latipinna
ENSOMEG00000003940	-	67	57.049	ENSPLAG00000001301	-	64	57.049	Poecilia_latipinna
ENSOMEG00000003940	-	99	56.125	ENSPLAG00000001304	-	98	56.125	Poecilia_latipinna
ENSOMEG00000003940	-	60	58.052	ENSPLAG00000014458	-	96	59.398	Poecilia_latipinna
ENSOMEG00000003940	-	60	59.925	ENSPMEG00000016192	-	94	58.993	Poecilia_mexicana
ENSOMEG00000003940	-	100	59.033	ENSPMEG00000013357	-	97	59.009	Poecilia_mexicana
ENSOMEG00000003940	-	76	56.711	ENSPMEG00000013339	-	98	56.711	Poecilia_mexicana
ENSOMEG00000003940	-	99	59.591	ENSPMEG00000006889	-	98	58.427	Poecilia_mexicana
ENSOMEG00000003940	-	99	47.583	ENSPMEG00000003409	zgc:153654	93	47.297	Poecilia_mexicana
ENSOMEG00000003940	-	67	57.705	ENSPMEG00000013347	-	64	57.705	Poecilia_mexicana
ENSOMEG00000003940	-	61	57.196	ENSPREG00000011848	-	93	56.631	Poecilia_reticulata
ENSOMEG00000003940	-	67	58.033	ENSPREG00000011808	-	64	58.033	Poecilia_reticulata
ENSOMEG00000003940	-	99	58.568	ENSPREG00000009457	-	98	57.303	Poecilia_reticulata
ENSOMEG00000003940	-	99	47.074	ENSPREG00000010723	zgc:153654	93	46.847	Poecilia_reticulata
ENSOMEG00000003940	-	100	60.051	ENSPREG00000011892	-	94	60.412	Poecilia_reticulata
ENSOMEG00000003940	-	99	49.235	ENSPNYG00000013106	zgc:153654	93	48.198	Pundamilia_nyererei
ENSOMEG00000003940	-	100	62.087	ENSPNYG00000014740	-	98	61.712	Pundamilia_nyererei
ENSOMEG00000003940	-	99	60.668	ENSPNYG00000016375	-	98	60.455	Pundamilia_nyererei
ENSOMEG00000003940	-	99	46.667	ENSPNAG00000013999	zgc:153654	99	46.667	Pygocentrus_nattereri
ENSOMEG00000003940	-	58	40.684	ENSSFOG00015022102	-	93	40.684	Scleropages_formosus
ENSOMEG00000003940	-	73	59.233	ENSSDUG00000009870	-	94	59.233	Seriola_dumerili
ENSOMEG00000003940	-	99	48.098	ENSSDUG00000012708	zgc:153654	93	48.098	Seriola_dumerili
ENSOMEG00000003940	-	100	61.069	ENSSDUG00000009840	-	98	60.899	Seriola_dumerili
ENSOMEG00000003940	-	74	58.904	ENSSLDG00000001591	-	82	58.904	Seriola_lalandi_dorsalis
ENSOMEG00000003940	-	99	47.875	ENSSLDG00000022597	zgc:153654	93	47.875	Seriola_lalandi_dorsalis
ENSOMEG00000003940	-	100	56.234	ENSSLDG00000001629	-	97	56.629	Seriola_lalandi_dorsalis
ENSOMEG00000003940	-	98	46.712	ENSSPUG00000010680	-	99	46.575	Sphenodon_punctatus
ENSOMEG00000003940	-	99	45.547	ENSSPAG00000018073	zgc:153654	94	45.909	Stegastes_partitus
ENSOMEG00000003940	-	62	48.201	ENSSPAG00000007037	-	92	48.736	Stegastes_partitus
ENSOMEG00000003940	-	71	59.353	ENSSPAG00000005921	-	90	59.353	Stegastes_partitus
ENSOMEG00000003940	-	92	45.028	ENSTRUG00000016083	-	81	45.499	Takifugu_rubripes
ENSOMEG00000003940	-	73	44.483	ENSTNIG00000017187	zgc:153654	99	44.483	Tetraodon_nigroviridis
ENSOMEG00000003940	-	100	60.406	ENSXCOG00000006325	-	98	60.181	Xiphophorus_couchianus
ENSOMEG00000003940	-	99	59.744	ENSXCOG00000008734	-	98	57.919	Xiphophorus_couchianus
ENSOMEG00000003940	-	99	47.000	ENSXCOG00000014178	zgc:153654	93	47.007	Xiphophorus_couchianus
ENSOMEG00000003940	-	67	56.250	ENSXMAG00000028256	-	64	56.766	Xiphophorus_maculatus
ENSOMEG00000003940	-	99	48.092	ENSXMAG00000010193	zgc:153654	93	47.973	Xiphophorus_maculatus
ENSOMEG00000003940	-	100	60.560	ENSXMAG00000002467	-	97	60.135	Xiphophorus_maculatus
ENSOMEG00000003940	-	99	59.847	ENSXMAG00000002325	-	98	58.427	Xiphophorus_maculatus