EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000004106 (Gene tree)
Gene ID: 112149378
Gene Symbol: srsf1a
Alias: -
Full Name: serine/arginine-rich splicing factor 1a
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3785 bases
Position: chrNVQA01000013.1:17524336-17528120
Accession: ZDB-GENE-040426-1950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000003182	RRM_1	PF00076.22	8.6e-27	1	2
ENSOMEP00000003182	RRM_1	PF00076.22	8.6e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000011247	-	1367	-	ENSOMEP00000003182	244 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000004106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000004106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000004106	srsf1a	90	60.811	ENSOMEG00000002601	srsf9	70	68.047
ENSOMEG00000004106	srsf1a	64	44.311	ENSOMEG00000000628	srsf5a	59	43.114
ENSOMEG00000004106	srsf1a	71	84.066	ENSOMEG00000017711	-	69	85.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000004106	srsf1a	92	82.743	ENSG00000136450	SRSF1	84	87.719	Homo_sapiens
ENSOMEG00000004106	srsf1a	71	87.356	ENSAPOG00000008542	-	73	86.813	Acanthochromis_polyacanthus
ENSOMEG00000004106	srsf1a	93	97.788	ENSAPOG00000002748	-	92	97.788	Acanthochromis_polyacanthus
ENSOMEG00000004106	srsf1a	71	86.207	ENSAMEG00000002635	SRSF1	70	87.356	Ailuropoda_melanoleuca
ENSOMEG00000004106	srsf1a	93	91.593	ENSACIG00000008091	srsf1a	92	91.593	Amphilophus_citrinellus
ENSOMEG00000004106	srsf1a	93	98.230	ENSAOCG00000010671	-	92	98.230	Amphiprion_ocellaris
ENSOMEG00000004106	srsf1a	71	86.813	ENSAOCG00000000337	-	73	86.813	Amphiprion_ocellaris
ENSOMEG00000004106	srsf1a	71	86.813	ENSAPEG00000023352	-	72	86.813	Amphiprion_percula
ENSOMEG00000004106	srsf1a	93	98.230	ENSAPEG00000009915	-	92	98.230	Amphiprion_percula
ENSOMEG00000004106	srsf1a	93	97.368	ENSATEG00000022403	-	92	97.368	Anabas_testudineus
ENSOMEG00000004106	srsf1a	74	85.556	ENSATEG00000021567	-	72	87.931	Anabas_testudineus
ENSOMEG00000004106	srsf1a	71	86.932	ENSACAG00000005542	-	71	89.205	Anolis_carolinensis
ENSOMEG00000004106	srsf1a	92	82.743	ENSANAG00000020583	-	70	90.341	Aotus_nancymaae
ENSOMEG00000004106	srsf1a	73	64.407	ENSANAG00000025417	-	65	64.943	Aotus_nancymaae
ENSOMEG00000004106	srsf1a	54	73.548	ENSAMXG00000024373	-	72	77.419	Astyanax_mexicanus
ENSOMEG00000004106	srsf1a	71	85.083	ENSAMXG00000035996	srsf1a	72	87.293	Astyanax_mexicanus
ENSOMEG00000004106	srsf1a	92	82.743	ENSBTAG00000014766	SRSF1	71	90.341	Bos_taurus
ENSOMEG00000004106	srsf1a	92	82.743	ENSCJAG00000041713	-	70	90.341	Callithrix_jacchus
ENSOMEG00000004106	srsf1a	71	81.250	ENSCJAG00000008111	-	78	82.955	Callithrix_jacchus
ENSOMEG00000004106	srsf1a	92	82.743	ENSCAFG00000017430	SRSF1	70	90.341	Canis_familiaris
ENSOMEG00000004106	srsf1a	92	82.743	ENSCAFG00020025632	-	70	90.341	Canis_lupus_dingo
ENSOMEG00000004106	srsf1a	71	88.068	ENSCHIG00000010787	SRSF1	71	90.341	Capra_hircus
ENSOMEG00000004106	srsf1a	92	82.743	ENSTSYG00000013899	-	70	90.341	Carlito_syrichta
ENSOMEG00000004106	srsf1a	92	82.743	ENSCPOG00000032681	-	71	90.341	Cavia_porcellus
ENSOMEG00000004106	srsf1a	92	82.743	ENSCCAG00000029484	-	71	90.341	Cebus_capucinus
ENSOMEG00000004106	srsf1a	92	82.743	ENSCATG00000042294	-	70	90.341	Cercocebus_atys
ENSOMEG00000004106	srsf1a	92	82.743	ENSCLAG00000014707	-	71	90.341	Chinchilla_lanigera
ENSOMEG00000004106	srsf1a	92	81.858	ENSCSAG00000005642	-	70	89.205	Chlorocebus_sabaeus
ENSOMEG00000004106	srsf1a	71	88.068	ENSCHOG00000001899	SRSF1	71	90.341	Choloepus_hoffmanni
ENSOMEG00000004106	srsf1a	92	82.301	ENSCPBG00000009851	-	71	89.773	Chrysemys_picta_bellii
ENSOMEG00000004106	srsf1a	92	82.743	ENSCANG00000029726	-	70	90.341	Colobus_angolensis_palliatus
ENSOMEG00000004106	srsf1a	92	82.743	ENSCGRG00001000670	Srsf1	70	90.341	Cricetulus_griseus_chok1gshd
ENSOMEG00000004106	srsf1a	92	82.743	ENSCGRG00000005590	Srsf1	71	90.341	Cricetulus_griseus_crigri
ENSOMEG00000004106	srsf1a	71	92.737	ENSCSEG00000014272	-	72	93.296	Cynoglossus_semilaevis
ENSOMEG00000004106	srsf1a	71	80.105	ENSCSEG00000009973	-	73	80.105	Cynoglossus_semilaevis
ENSOMEG00000004106	srsf1a	71	86.441	ENSCVAG00000005458	-	82	86.061	Cyprinodon_variegatus
ENSOMEG00000004106	srsf1a	93	97.788	ENSCVAG00000018617	-	92	97.788	Cyprinodon_variegatus
ENSOMEG00000004106	srsf1a	71	88.068	ENSDARG00000017843	srsf1b	72	90.341	Danio_rerio
ENSOMEG00000004106	srsf1a	71	82.796	ENSDARG00000057691	srsf1a	90	83.237	Danio_rerio
ENSOMEG00000004106	srsf1a	92	82.743	ENSDNOG00000011737	-	70	90.341	Dasypus_novemcinctus
ENSOMEG00000004106	srsf1a	92	82.743	ENSDORG00000015082	Srsf1	71	90.341	Dipodomys_ordii
ENSOMEG00000004106	srsf1a	66	86.503	ENSETEG00000005349	-	56	89.571	Echinops_telfairi
ENSOMEG00000004106	srsf1a	92	82.743	ENSEASG00005002922	-	70	90.341	Equus_asinus_asinus
ENSOMEG00000004106	srsf1a	71	88.068	ENSECAG00000016654	SRSF1	71	90.341	Equus_caballus
ENSOMEG00000004106	srsf1a	66	87.730	ENSEEUG00000009255	-	56	90.798	Erinaceus_europaeus
ENSOMEG00000004106	srsf1a	71	90.857	ENSELUG00000021646	srsf1a	70	91.429	Esox_lucius
ENSOMEG00000004106	srsf1a	92	82.743	ENSFCAG00000002250	-	81	90.798	Felis_catus
ENSOMEG00000004106	srsf1a	71	86.111	ENSFALG00000005062	-	70	69.318	Ficedula_albicollis
ENSOMEG00000004106	srsf1a	92	82.743	ENSFDAG00000010646	-	71	90.341	Fukomys_damarensis
ENSOMEG00000004106	srsf1a	93	97.345	ENSFHEG00000003174	srsf1a	92	97.345	Fundulus_heteroclitus
ENSOMEG00000004106	srsf1a	73	86.592	ENSGMOG00000014787	-	73	85.632	Gadus_morhua
ENSOMEG00000004106	srsf1a	71	87.500	ENSGALG00000005525	SRSF1	71	89.773	Gallus_gallus
ENSOMEG00000004106	srsf1a	71	83.908	ENSGACG00000020621	srsf1b	71	83.333	Gasterosteus_aculeatus
ENSOMEG00000004106	srsf1a	92	82.301	ENSGAGG00000022965	-	70	89.773	Gopherus_agassizii
ENSOMEG00000004106	srsf1a	92	82.743	ENSGGOG00000004386	SRSF1	70	90.341	Gorilla_gorilla
ENSOMEG00000004106	srsf1a	93	97.788	ENSHBUG00000016788	srsf1a	92	97.788	Haplochromis_burtoni
ENSOMEG00000004106	srsf1a	66	89.634	ENSHGLG00000000600	-	76	92.073	Heterocephalus_glaber_female
ENSOMEG00000004106	srsf1a	66	89.634	ENSHGLG00000000669	-	76	92.073	Heterocephalus_glaber_female
ENSOMEG00000004106	srsf1a	92	82.743	ENSHGLG00100016906	-	71	90.341	Heterocephalus_glaber_male
ENSOMEG00000004106	srsf1a	71	87.778	ENSHCOG00000018918	srsf1a	70	89.444	Hippocampus_comes
ENSOMEG00000004106	srsf1a	88	78.027	ENSIPUG00000017039	srsf1a	72	86.813	Ictalurus_punctatus
ENSOMEG00000004106	srsf1a	71	87.429	ENSIPUG00000008750	srsf1b	71	90.286	Ictalurus_punctatus
ENSOMEG00000004106	srsf1a	92	82.743	ENSSTOG00000000243	-	82	90.798	Ictidomys_tridecemlineatus
ENSOMEG00000004106	srsf1a	92	82.743	ENSJJAG00000000102	-	71	90.341	Jaculus_jaculus
ENSOMEG00000004106	srsf1a	93	96.476	ENSKMAG00000019232	srsf1a	92	96.476	Kryptolebias_marmoratus
ENSOMEG00000004106	srsf1a	71	79.888	ENSLBEG00000015294	-	72	81.564	Labrus_bergylta
ENSOMEG00000004106	srsf1a	93	97.345	ENSLBEG00000020864	-	92	97.345	Labrus_bergylta
ENSOMEG00000004106	srsf1a	71	88.000	ENSLACG00000014160	srsf1a	66	88.000	Latimeria_chalumnae
ENSOMEG00000004106	srsf1a	71	86.857	ENSLOCG00000005994	srsf1a	71	90.286	Lepisosteus_oculatus
ENSOMEG00000004106	srsf1a	71	88.068	ENSLAFG00000025743	SRSF1	71	90.341	Loxodonta_africana
ENSOMEG00000004106	srsf1a	92	82.743	ENSMFAG00000040003	-	71	90.341	Macaca_fascicularis
ENSOMEG00000004106	srsf1a	92	79.646	ENSMMUG00000003260	-	85	87.429	Macaca_mulatta
ENSOMEG00000004106	srsf1a	92	82.743	ENSMMUG00000004725	SRSF1	70	90.341	Macaca_mulatta
ENSOMEG00000004106	srsf1a	92	80.088	ENSMNEG00000015983	-	70	87.500	Macaca_nemestrina
ENSOMEG00000004106	srsf1a	92	82.743	ENSMNEG00000027680	-	70	90.341	Macaca_nemestrina
ENSOMEG00000004106	srsf1a	71	88.068	ENSMLEG00000040509	SRSF1	71	90.341	Mandrillus_leucophaeus
ENSOMEG00000004106	srsf1a	92	80.357	ENSMLEG00000015243	-	69	85.632	Mandrillus_leucophaeus
ENSOMEG00000004106	srsf1a	71	90.857	ENSMAMG00000019691	-	73	90.286	Mastacembelus_armatus
ENSOMEG00000004106	srsf1a	71	88.506	ENSMAMG00000019687	-	71	88.506	Mastacembelus_armatus
ENSOMEG00000004106	srsf1a	93	98.230	ENSMAMG00000018454	-	92	98.230	Mastacembelus_armatus
ENSOMEG00000004106	srsf1a	92	82.743	ENSMAUG00000021845	Srsf1	71	90.341	Mesocricetus_auratus
ENSOMEG00000004106	srsf1a	92	82.743	ENSMICG00000013639	-	70	90.341	Microcebus_murinus
ENSOMEG00000004106	srsf1a	92	82.743	ENSMOCG00000001996	Srsf1	71	90.341	Microtus_ochrogaster
ENSOMEG00000004106	srsf1a	93	90.708	ENSMMOG00000014354	srsf1a	92	90.708	Mola_mola
ENSOMEG00000004106	srsf1a	66	87.805	ENSMODG00000014781	-	56	90.854	Monodelphis_domestica
ENSOMEG00000004106	srsf1a	74	75.556	ENSMALG00000007763	-	69	79.310	Monopterus_albus
ENSOMEG00000004106	srsf1a	71	97.701	ENSMALG00000017129	-	68	97.701	Monopterus_albus
ENSOMEG00000004106	srsf1a	92	82.743	MGP_CAROLIEiJ_G0016943	Srsf1	81	90.798	Mus_caroli
ENSOMEG00000004106	srsf1a	92	82.743	ENSMUSG00000018379	Srsf1	81	90.798	Mus_musculus
ENSOMEG00000004106	srsf1a	92	82.743	MGP_PahariEiJ_G0018074	Srsf1	74	97.436	Mus_pahari
ENSOMEG00000004106	srsf1a	92	82.743	MGP_SPRETEiJ_G0017790	Srsf1	81	90.798	Mus_spretus
ENSOMEG00000004106	srsf1a	71	88.068	ENSMPUG00000015369	SRSF1	71	90.341	Mustela_putorius_furo
ENSOMEG00000004106	srsf1a	74	86.667	ENSMLUG00000023995	-	70	86.207	Myotis_lucifugus
ENSOMEG00000004106	srsf1a	71	88.068	ENSMLUG00000011040	SRSF1	71	90.341	Myotis_lucifugus
ENSOMEG00000004106	srsf1a	71	88.068	ENSNGAG00000011395	Srsf1	71	90.341	Nannospalax_galili
ENSOMEG00000004106	srsf1a	93	71.806	ENSNBRG00000008041	srsf1b	71	77.714	Neolamprologus_brichardi
ENSOMEG00000004106	srsf1a	92	82.743	ENSNLEG00000008088	-	70	90.341	Nomascus_leucogenys
ENSOMEG00000004106	srsf1a	53	88.636	ENSOPRG00000001234	-	72	91.667	Ochotona_princeps
ENSOMEG00000004106	srsf1a	92	82.743	ENSODEG00000011481	-	71	90.341	Octodon_degus
ENSOMEG00000004106	srsf1a	93	97.788	ENSONIG00000013160	-	91	97.788	Oreochromis_niloticus
ENSOMEG00000004106	srsf1a	73	89.888	ENSONIG00000004860	-	72	89.143	Oreochromis_niloticus
ENSOMEG00000004106	srsf1a	93	63.319	ENSOCUG00000010894	-	69	70.349	Oryctolagus_cuniculus
ENSOMEG00000004106	srsf1a	93	98.230	ENSORLG00000004580	srsf1a	92	98.230	Oryzias_latipes
ENSOMEG00000004106	srsf1a	93	98.230	ENSORLG00020009456	srsf1a	92	98.230	Oryzias_latipes_hni
ENSOMEG00000004106	srsf1a	93	97.788	ENSORLG00015014384	srsf1a	92	97.788	Oryzias_latipes_hsok
ENSOMEG00000004106	srsf1a	76	88.770	ENSOGAG00000025950	-	71	90.341	Otolemur_garnettii
ENSOMEG00000004106	srsf1a	71	86.782	ENSOARG00000008323	SRSF1	69	86.782	Ovis_aries
ENSOMEG00000004106	srsf1a	92	82.743	ENSPPAG00000043403	-	71	90.341	Pan_paniscus
ENSOMEG00000004106	srsf1a	92	82.743	ENSPPRG00000004238	-	81	90.798	Panthera_pardus
ENSOMEG00000004106	srsf1a	92	82.743	ENSPTRG00000049077	SRSF1	82	87.719	Pan_troglodytes
ENSOMEG00000004106	srsf1a	92	64.732	ENSPANG00000030275	-	64	65.116	Papio_anubis
ENSOMEG00000004106	srsf1a	92	82.743	ENSPANG00000022305	-	70	90.341	Papio_anubis
ENSOMEG00000004106	srsf1a	71	89.655	ENSPKIG00000007204	srsf1a	75	89.655	Paramormyrops_kingsleyae
ENSOMEG00000004106	srsf1a	71	86.857	ENSPKIG00000012857	srsf1b	71	90.286	Paramormyrops_kingsleyae
ENSOMEG00000004106	srsf1a	71	79.545	ENSPSIG00000009000	-	72	91.729	Pelodiscus_sinensis
ENSOMEG00000004106	srsf1a	93	95.279	ENSPMGG00000013112	-	97	95.279	Periophthalmus_magnuspinnatus
ENSOMEG00000004106	srsf1a	89	81.106	ENSPMGG00000005467	-	74	86.782	Periophthalmus_magnuspinnatus
ENSOMEG00000004106	srsf1a	92	82.743	ENSPEMG00000021416	Srsf1	71	90.341	Peromyscus_maniculatus_bairdii
ENSOMEG00000004106	srsf1a	71	88.136	ENSPCIG00000006076	-	71	90.395	Phascolarctos_cinereus
ENSOMEG00000004106	srsf1a	72	87.151	ENSPFOG00000018325	-	63	87.429	Poecilia_formosa
ENSOMEG00000004106	srsf1a	73	86.667	ENSPLAG00000008416	srsf1b	72	86.932	Poecilia_latipinna
ENSOMEG00000004106	srsf1a	73	86.667	ENSPMEG00000002388	-	72	86.932	Poecilia_mexicana
ENSOMEG00000004106	srsf1a	93	97.788	ENSPREG00000009667	srsf1a	92	97.788	Poecilia_reticulata
ENSOMEG00000004106	srsf1a	92	82.743	ENSPPYG00000008240	SRSF1	71	90.341	Pongo_abelii
ENSOMEG00000004106	srsf1a	71	88.068	ENSPCAG00000005199	SRSF1	71	90.341	Procavia_capensis
ENSOMEG00000004106	srsf1a	72	70.000	ENSPCOG00000025736	-	84	70.930	Propithecus_coquereli
ENSOMEG00000004106	srsf1a	92	82.743	ENSPCOG00000023654	-	71	90.341	Propithecus_coquereli
ENSOMEG00000004106	srsf1a	71	89.655	ENSPNAG00000022241	srsf1a	71	89.655	Pygocentrus_nattereri
ENSOMEG00000004106	srsf1a	71	89.655	ENSPNAG00000014601	srsf1b	71	89.655	Pygocentrus_nattereri
ENSOMEG00000004106	srsf1a	71	88.068	ENSRNOG00000050323	Srsf1	71	90.341	Rattus_norvegicus
ENSOMEG00000004106	srsf1a	92	82.743	ENSRBIG00000034445	-	70	90.341	Rhinopithecus_bieti
ENSOMEG00000004106	srsf1a	92	82.743	ENSRROG00000041506	-	71	90.341	Rhinopithecus_roxellana
ENSOMEG00000004106	srsf1a	92	82.743	ENSSBOG00000025377	-	71	90.341	Saimiri_boliviensis_boliviensis
ENSOMEG00000004106	srsf1a	71	88.136	ENSSHAG00000002552	-	71	90.395	Sarcophilus_harrisii
ENSOMEG00000004106	srsf1a	71	90.230	ENSSFOG00015004800	srsf1a	70	90.230	Scleropages_formosus
ENSOMEG00000004106	srsf1a	71	96.552	ENSSMAG00000007018	-	71	96.552	Scophthalmus_maximus
ENSOMEG00000004106	srsf1a	71	83.060	ENSSMAG00000009719	-	72	83.060	Scophthalmus_maximus
ENSOMEG00000004106	srsf1a	93	97.345	ENSSDUG00000011303	-	92	97.345	Seriola_dumerili
ENSOMEG00000004106	srsf1a	91	71.491	ENSSDUG00000003929	-	74	79.213	Seriola_dumerili
ENSOMEG00000004106	srsf1a	93	97.345	ENSSLDG00000010543	-	92	97.345	Seriola_lalandi_dorsalis
ENSOMEG00000004106	srsf1a	71	76.000	ENSSLDG00000016868	-	69	75.429	Seriola_lalandi_dorsalis
ENSOMEG00000004106	srsf1a	67	80.606	ENSSLDG00000016895	-	69	83.636	Seriola_lalandi_dorsalis
ENSOMEG00000004106	srsf1a	66	87.730	ENSSARG00000010949	-	56	90.798	Sorex_araneus
ENSOMEG00000004106	srsf1a	92	82.301	ENSSPUG00000000804	-	82	90.184	Sphenodon_punctatus
ENSOMEG00000004106	srsf1a	93	97.797	ENSSPAG00000022562	-	92	97.797	Stegastes_partitus
ENSOMEG00000004106	srsf1a	71	83.511	ENSSPAG00000014152	-	73	83.511	Stegastes_partitus
ENSOMEG00000004106	srsf1a	92	82.743	ENSSSCG00000017626	-	71	90.341	Sus_scrofa
ENSOMEG00000004106	srsf1a	54	87.970	ENSTGUG00000008416	-	72	90.977	Taeniopygia_guttata
ENSOMEG00000004106	srsf1a	93	97.345	ENSTRUG00000003691	srsf1a	92	97.345	Takifugu_rubripes
ENSOMEG00000004106	srsf1a	93	97.345	ENSTNIG00000016223	srsf1a	91	97.345	Tetraodon_nigroviridis
ENSOMEG00000004106	srsf1a	66	86.503	ENSTBEG00000015378	-	56	89.571	Tupaia_belangeri
ENSOMEG00000004106	srsf1a	53	88.636	ENSTTRG00000007310	SRSF1	72	91.667	Tursiops_truncatus
ENSOMEG00000004106	srsf1a	71	88.068	ENSUAMG00000009858	SRSF1	71	90.341	Ursus_americanus
ENSOMEG00000004106	srsf1a	92	82.743	ENSUMAG00000000455	-	70	90.341	Ursus_maritimus
ENSOMEG00000004106	srsf1a	71	87.500	ENSVPAG00000010094	SRSF1	71	89.773	Vicugna_pacos
ENSOMEG00000004106	srsf1a	92	82.743	ENSVVUG00000011882	-	70	90.341	Vulpes_vulpes
ENSOMEG00000004106	srsf1a	71	90.230	ENSXETG00000008954	srsf1	73	81.538	Xenopus_tropicalis
ENSOMEG00000004106	srsf1a	93	97.788	ENSXMAG00000011766	srsf1a	92	97.788	Xiphophorus_maculatus