EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000004134 (Gene tree)
Gene ID: 112163257
Gene Symbol: prdm12b
Alias: -
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3749 bases
Position: chrNVQA01000031.1:12064357-12068105
Accession: 112163257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000003216	zf-C2H2	PF00096.26	8.1e-13	1	2
ENSOMEP00000003216	zf-C2H2	PF00096.26	8.1e-13	2	2
ENSOMEP00000003216	zf-met	PF12874.7	9.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000011202	-	1943	-	ENSOMEP00000003216	383 (aa)	XP_024155334	UPI000CF8390E

Gene Model

Click here to download ENSOMEG00000004134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000004134's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000004134	prdm12b	99	77.436	ENSOMEG00000007762	-	100	77.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000004134	prdm12b	91	80.000	ENSG00000130711	PRDM12	100	74.419	Homo_sapiens
ENSOMEG00000004134	prdm12b	99	89.844	ENSAPOG00000016051	prdm12b	100	90.390	Acanthochromis_polyacanthus
ENSOMEG00000004134	prdm12b	99	65.707	ENSAPOG00000018234	-	100	66.492	Acanthochromis_polyacanthus
ENSOMEG00000004134	prdm12b	90	79.592	ENSAMEG00000016234	PRDM12	99	79.009	Ailuropoda_melanoleuca
ENSOMEG00000004134	prdm12b	99	88.482	ENSACIG00000019578	prdm12b	100	88.743	Amphilophus_citrinellus
ENSOMEG00000004134	prdm12b	99	77.215	ENSACIG00000005193	-	100	76.650	Amphilophus_citrinellus
ENSOMEG00000004134	prdm12b	99	88.512	ENSAOCG00000015040	prdm12b	100	88.802	Amphiprion_ocellaris
ENSOMEG00000004134	prdm12b	99	87.990	ENSAPEG00000015092	prdm12b	100	88.542	Amphiprion_percula
ENSOMEG00000004134	prdm12b	100	70.823	ENSAPEG00000022849	-	100	71.820	Amphiprion_percula
ENSOMEG00000004134	prdm12b	99	79.949	ENSATEG00000014595	-	100	79.434	Anabas_testudineus
ENSOMEG00000004134	prdm12b	94	78.670	ENSANAG00000020616	PRDM12	99	79.155	Aotus_nancymaae
ENSOMEG00000004134	prdm12b	99	85.602	ENSACLG00000011876	prdm12b	100	85.602	Astatotilapia_calliptera
ENSOMEG00000004134	prdm12b	99	73.762	ENSACLG00000007631	-	100	73.762	Astatotilapia_calliptera
ENSOMEG00000004134	prdm12b	99	81.510	ENSAMXG00000033665	prdm12b	100	81.510	Astyanax_mexicanus
ENSOMEG00000004134	prdm12b	99	78.646	ENSAMXG00000008540	PRDM12	100	76.963	Astyanax_mexicanus
ENSOMEG00000004134	prdm12b	91	80.571	ENSBTAG00000023797	PRDM12	100	75.389	Bos_taurus
ENSOMEG00000004134	prdm12b	91	80.000	ENSCJAG00000020540	PRDM12	99	76.064	Callithrix_jacchus
ENSOMEG00000004134	prdm12b	80	80.130	ENSCAFG00000023076	PRDM12	99	74.487	Canis_familiaris
ENSOMEG00000004134	prdm12b	91	80.286	ENSCAFG00020024046	PRDM12	99	75.789	Canis_lupus_dingo
ENSOMEG00000004134	prdm12b	91	80.286	ENSCHIG00000025005	PRDM12	100	75.979	Capra_hircus
ENSOMEG00000004134	prdm12b	91	77.937	ENSCPOG00000005901	PRDM12	99	77.650	Cavia_porcellus
ENSOMEG00000004134	prdm12b	91	80.000	ENSCCAG00000037485	PRDM12	100	74.674	Cebus_capucinus
ENSOMEG00000004134	prdm12b	91	80.000	ENSCATG00000020327	PRDM12	100	74.674	Cercocebus_atys
ENSOMEG00000004134	prdm12b	91	80.057	ENSCLAG00000005499	PRDM12	90	79.772	Chinchilla_lanigera
ENSOMEG00000004134	prdm12b	91	80.000	ENSCSAG00000014756	PRDM12	99	75.263	Chlorocebus_sabaeus
ENSOMEG00000004134	prdm12b	100	76.501	ENSCPBG00000022628	PRDM12	100	75.718	Chrysemys_picta_bellii
ENSOMEG00000004134	prdm12b	91	80.571	ENSCGRG00001015005	Prdm12	100	75.389	Cricetulus_griseus_chok1gshd
ENSOMEG00000004134	prdm12b	99	86.387	ENSCVAG00000017166	prdm12b	100	86.649	Cyprinodon_variegatus
ENSOMEG00000004134	prdm12b	99	78.261	ENSCVAG00000000944	-	100	78.005	Cyprinodon_variegatus
ENSOMEG00000004134	prdm12b	99	80.628	ENSDARG00000007430	prdm12b	100	80.628	Danio_rerio
ENSOMEG00000004134	prdm12b	91	80.000	ENSDNOG00000042302	PRDM12	99	75.457	Dasypus_novemcinctus
ENSOMEG00000004134	prdm12b	93	62.766	ENSEBUG00000016780	prdm12b	73	67.964	Eptatretus_burgeri
ENSOMEG00000004134	prdm12b	94	78.947	ENSEASG00005008472	PRDM12	99	76.455	Equus_asinus_asinus
ENSOMEG00000004134	prdm12b	94	78.947	ENSECAG00000005933	PRDM12	99	76.455	Equus_caballus
ENSOMEG00000004134	prdm12b	99	81.201	ENSELUG00000009905	prdm12b	100	80.940	Esox_lucius
ENSOMEG00000004134	prdm12b	99	81.723	ENSELUG00000013674	PRDM12	100	82.245	Esox_lucius
ENSOMEG00000004134	prdm12b	91	80.286	ENSFCAG00000043086	PRDM12	100	75.196	Felis_catus
ENSOMEG00000004134	prdm12b	100	77.546	ENSFALG00000001445	PRDM12	89	76.240	Ficedula_albicollis
ENSOMEG00000004134	prdm12b	99	73.515	ENSFHEG00000007746	-	100	73.020	Fundulus_heteroclitus
ENSOMEG00000004134	prdm12b	99	86.684	ENSFHEG00000003944	prdm12b	100	86.945	Fundulus_heteroclitus
ENSOMEG00000004134	prdm12b	99	81.912	ENSGMOG00000011797	prdm12b	100	80.879	Gadus_morhua
ENSOMEG00000004134	prdm12b	100	77.546	ENSGALG00000003895	PRDM12	100	76.240	Gallus_gallus
ENSOMEG00000004134	prdm12b	100	85.347	ENSGAFG00000010827	prdm12b	100	85.090	Gambusia_affinis
ENSOMEG00000004134	prdm12b	100	87.273	ENSGACG00000016713	prdm12b	100	86.753	Gasterosteus_aculeatus
ENSOMEG00000004134	prdm12b	100	76.501	ENSGAGG00000014083	PRDM12	100	75.718	Gopherus_agassizii
ENSOMEG00000004134	prdm12b	91	79.714	ENSGGOG00000010568	PRDM12	100	74.352	Gorilla_gorilla
ENSOMEG00000004134	prdm12b	99	88.482	ENSHBUG00000022878	prdm12b	100	88.743	Haplochromis_burtoni
ENSOMEG00000004134	prdm12b	99	73.762	ENSHBUG00000022537	-	93	73.762	Haplochromis_burtoni
ENSOMEG00000004134	prdm12b	91	80.286	ENSHGLG00000013939	PRDM12	100	75.065	Heterocephalus_glaber_female
ENSOMEG00000004134	prdm12b	90	88.252	ENSHCOG00000003663	prdm12b	100	81.955	Hippocampus_comes
ENSOMEG00000004134	prdm12b	99	70.543	ENSHCOG00000021167	-	100	69.072	Hippocampus_comes
ENSOMEG00000004134	prdm12b	99	81.675	ENSIPUG00000017053	prdm12b	100	81.414	Ictalurus_punctatus
ENSOMEG00000004134	prdm12b	99	77.225	ENSIPUG00000019544	PRDM12	100	76.702	Ictalurus_punctatus
ENSOMEG00000004134	prdm12b	96	78.474	ENSSTOG00000005986	PRDM12	89	79.109	Ictidomys_tridecemlineatus
ENSOMEG00000004134	prdm12b	91	81.268	ENSJJAG00000005424	Prdm12	100	80.286	Jaculus_jaculus
ENSOMEG00000004134	prdm12b	99	81.572	ENSKMAG00000016921	prdm12b	100	82.310	Kryptolebias_marmoratus
ENSOMEG00000004134	prdm12b	94	76.796	ENSKMAG00000021205	-	94	76.294	Kryptolebias_marmoratus
ENSOMEG00000004134	prdm12b	99	79.434	ENSLBEG00000007776	-	100	79.949	Labrus_bergylta
ENSOMEG00000004134	prdm12b	99	85.861	ENSLBEG00000017769	prdm12b	100	85.861	Labrus_bergylta
ENSOMEG00000004134	prdm12b	99	76.440	ENSLACG00000017560	PRDM12	99	75.654	Latimeria_chalumnae
ENSOMEG00000004134	prdm12b	99	81.723	ENSLOCG00000005429	prdm12b	100	81.723	Lepisosteus_oculatus
ENSOMEG00000004134	prdm12b	91	79.714	ENSLAFG00000006979	PRDM12	89	79.545	Loxodonta_africana
ENSOMEG00000004134	prdm12b	91	79.714	ENSMFAG00000040322	PRDM12	91	78.873	Macaca_fascicularis
ENSOMEG00000004134	prdm12b	91	80.000	ENSMNEG00000037234	PRDM12	100	74.674	Macaca_nemestrina
ENSOMEG00000004134	prdm12b	99	86.911	ENSMAMG00000013212	prdm12b	100	88.542	Mastacembelus_armatus
ENSOMEG00000004134	prdm12b	99	72.482	ENSMAMG00000018988	-	100	73.219	Mastacembelus_armatus
ENSOMEG00000004134	prdm12b	99	73.399	ENSMZEG00005000415	PRDM12	100	73.399	Maylandia_zebra
ENSOMEG00000004134	prdm12b	97	78.495	ENSMGAG00000005438	PRDM12	95	79.437	Meleagris_gallopavo
ENSOMEG00000004134	prdm12b	94	79.224	ENSMAUG00000013040	Prdm12	100	75.325	Mesocricetus_auratus
ENSOMEG00000004134	prdm12b	95	78.788	ENSMICG00000015480	PRDM12	100	75.718	Microcebus_murinus
ENSOMEG00000004134	prdm12b	99	76.364	ENSMOCG00000021026	Prdm12	92	80.000	Microtus_ochrogaster
ENSOMEG00000004134	prdm12b	100	75.718	ENSMODG00000012108	PRDM12	100	75.781	Monodelphis_domestica
ENSOMEG00000004134	prdm12b	85	84.049	ENSMALG00000021901	prdm12b	99	73.438	Monopterus_albus
ENSOMEG00000004134	prdm12b	91	80.571	MGP_CAROLIEiJ_G0023414	Prdm12	100	75.584	Mus_caroli
ENSOMEG00000004134	prdm12b	91	80.571	ENSMUSG00000079466	Prdm12	100	75.584	Mus_musculus
ENSOMEG00000004134	prdm12b	91	80.571	MGP_PahariEiJ_G0024871	Prdm12	100	75.584	Mus_pahari
ENSOMEG00000004134	prdm12b	91	80.571	MGP_SPRETEiJ_G0024331	Prdm12	100	75.584	Mus_spretus
ENSOMEG00000004134	prdm12b	91	81.556	ENSNGAG00000018480	Prdm12	99	76.676	Nannospalax_galili
ENSOMEG00000004134	prdm12b	99	89.529	ENSNBRG00000006727	prdm12b	100	89.005	Neolamprologus_brichardi
ENSOMEG00000004134	prdm12b	99	69.744	ENSNBRG00000024312	-	100	69.744	Neolamprologus_brichardi
ENSOMEG00000004134	prdm12b	100	67.885	ENSMEUG00000003828	PRDM12	86	84.375	Notamacropus_eugenii
ENSOMEG00000004134	prdm12b	91	80.286	ENSOPRG00000008680	PRDM12	100	80.286	Ochotona_princeps
ENSOMEG00000004134	prdm12b	94	78.611	ENSODEG00000016282	PRDM12	63	79.155	Octodon_degus
ENSOMEG00000004134	prdm12b	64	74.390	ENSOANG00000001043	PRDM12	100	72.541	Ornithorhynchus_anatinus
ENSOMEG00000004134	prdm12b	83	79.937	ENSOCUG00000008241	PRDM12	100	77.711	Oryctolagus_cuniculus
ENSOMEG00000004134	prdm12b	100	96.354	ENSORLG00000007114	prdm12b	100	96.354	Oryzias_latipes
ENSOMEG00000004134	prdm12b	99	76.322	ENSORLG00000017558	-	100	76.692	Oryzias_latipes
ENSOMEG00000004134	prdm12b	100	96.364	ENSORLG00020019565	prdm12b	100	96.364	Oryzias_latipes_hni
ENSOMEG00000004134	prdm12b	99	76.574	ENSORLG00020013167	-	100	76.692	Oryzias_latipes_hni
ENSOMEG00000004134	prdm12b	99	76.010	ENSORLG00015003435	-	100	76.382	Oryzias_latipes_hsok
ENSOMEG00000004134	prdm12b	100	96.354	ENSORLG00015007621	prdm12b	100	96.354	Oryzias_latipes_hsok
ENSOMEG00000004134	prdm12b	91	80.286	ENSOGAG00000007557	PRDM12	99	80.286	Otolemur_garnettii
ENSOMEG00000004134	prdm12b	80	78.502	ENSPPAG00000031506	-	99	77.316	Pan_paniscus
ENSOMEG00000004134	prdm12b	98	70.899	ENSPPRG00000023024	PRDM12	91	70.557	Panthera_pardus
ENSOMEG00000004134	prdm12b	91	80.000	ENSPTRG00000021475	PRDM12	100	74.611	Pan_troglodytes
ENSOMEG00000004134	prdm12b	91	80.000	ENSPTRG00000043324	-	100	74.611	Pan_troglodytes
ENSOMEG00000004134	prdm12b	91	80.000	ENSPANG00000025967	PRDM12	100	74.674	Papio_anubis
ENSOMEG00000004134	prdm12b	99	81.723	ENSPKIG00000007228	prdm12b	100	81.723	Paramormyrops_kingsleyae
ENSOMEG00000004134	prdm12b	90	78.841	ENSPKIG00000004305	PRDM12	94	77.971	Paramormyrops_kingsleyae
ENSOMEG00000004134	prdm12b	100	76.762	ENSPSIG00000006739	PRDM12	100	75.979	Pelodiscus_sinensis
ENSOMEG00000004134	prdm12b	91	79.830	ENSPMGG00000002356	-	100	72.886	Periophthalmus_magnuspinnatus
ENSOMEG00000004134	prdm12b	100	85.379	ENSPMGG00000008867	prdm12b	100	85.714	Periophthalmus_magnuspinnatus
ENSOMEG00000004134	prdm12b	95	78.415	ENSPEMG00000009969	Prdm12	93	79.387	Peromyscus_maniculatus_bairdii
ENSOMEG00000004134	prdm12b	100	75.718	ENSPCIG00000024119	PRDM12	100	75.781	Phascolarctos_cinereus
ENSOMEG00000004134	prdm12b	99	86.979	ENSPFOG00000019841	prdm12b	100	85.677	Poecilia_formosa
ENSOMEG00000004134	prdm12b	100	84.655	ENSPLAG00000016626	prdm12b	100	84.439	Poecilia_latipinna
ENSOMEG00000004134	prdm12b	96	85.411	ENSPMEG00000016698	prdm12b	99	84.881	Poecilia_mexicana
ENSOMEG00000004134	prdm12b	100	84.184	ENSPREG00000015073	prdm12b	100	84.224	Poecilia_reticulata
ENSOMEG00000004134	prdm12b	95	71.505	ENSPREG00000003211	-	94	71.237	Poecilia_reticulata
ENSOMEG00000004134	prdm12b	94	78.670	ENSPPYG00000019694	PRDM12	93	80.692	Pongo_abelii
ENSOMEG00000004134	prdm12b	91	80.286	ENSPCOG00000022255	PRDM12	100	75.389	Propithecus_coquereli
ENSOMEG00000004134	prdm12b	91	80.000	ENSPVAG00000001511	PRDM12	100	74.870	Pteropus_vampyrus
ENSOMEG00000004134	prdm12b	99	73.399	ENSPNYG00000013589	-	100	73.399	Pundamilia_nyererei
ENSOMEG00000004134	prdm12b	99	89.791	ENSPNYG00000009607	prdm12b	100	88.482	Pundamilia_nyererei
ENSOMEG00000004134	prdm12b	99	76.350	ENSPNAG00000013396	PRDM12	100	76.667	Pygocentrus_nattereri
ENSOMEG00000004134	prdm12b	99	81.414	ENSPNAG00000024532	prdm12b	100	81.152	Pygocentrus_nattereri
ENSOMEG00000004134	prdm12b	91	80.571	ENSRNOG00000009218	Prdm12	100	75.584	Rattus_norvegicus
ENSOMEG00000004134	prdm12b	88	80.712	ENSRBIG00000042712	PRDM12	90	79.251	Rhinopithecus_bieti
ENSOMEG00000004134	prdm12b	89	80.938	ENSRROG00000043554	PRDM12	100	80.938	Rhinopithecus_roxellana
ENSOMEG00000004134	prdm12b	100	75.521	ENSSHAG00000015972	PRDM12	100	75.584	Sarcophilus_harrisii
ENSOMEG00000004134	prdm12b	99	86.154	ENSSMAG00000003754	prdm12b	100	87.724	Scophthalmus_maximus
ENSOMEG00000004134	prdm12b	99	80.155	ENSSDUG00000019071	-	100	79.639	Seriola_dumerili
ENSOMEG00000004134	prdm12b	99	89.896	ENSSDUG00000023498	prdm12b	100	89.896	Seriola_dumerili
ENSOMEG00000004134	prdm12b	99	76.042	ENSSLDG00000013562	-	100	76.104	Seriola_lalandi_dorsalis
ENSOMEG00000004134	prdm12b	99	90.390	ENSSLDG00000009557	prdm12b	100	90.130	Seriola_lalandi_dorsalis
ENSOMEG00000004134	prdm12b	100	76.501	ENSSPUG00000013424	PRDM12	100	75.457	Sphenodon_punctatus
ENSOMEG00000004134	prdm12b	99	89.295	ENSSPAG00000018824	prdm12b	100	89.583	Stegastes_partitus
ENSOMEG00000004134	prdm12b	99	70.663	ENSSPAG00000022420	-	100	69.388	Stegastes_partitus
ENSOMEG00000004134	prdm12b	91	80.286	ENSSSCG00000005703	PRDM12	99	75.789	Sus_scrofa
ENSOMEG00000004134	prdm12b	99	84.375	ENSTRUG00000018659	prdm12b	100	84.115	Takifugu_rubripes
ENSOMEG00000004134	prdm12b	99	75.457	ENSTRUG00000013239	-	100	75.196	Takifugu_rubripes
ENSOMEG00000004134	prdm12b	99	84.635	ENSTNIG00000009020	prdm12b	99	85.156	Tetraodon_nigroviridis
ENSOMEG00000004134	prdm12b	99	73.247	ENSTNIG00000005859	-	99	72.987	Tetraodon_nigroviridis
ENSOMEG00000004134	prdm12b	91	80.286	ENSUAMG00000009653	PRDM12	99	76.596	Ursus_americanus
ENSOMEG00000004134	prdm12b	91	80.286	ENSVVUG00000027662	PRDM12	78	80.980	Vulpes_vulpes
ENSOMEG00000004134	prdm12b	100	86.269	ENSXCOG00000002836	prdm12b	100	85.530	Xiphophorus_couchianus
ENSOMEG00000004134	prdm12b	99	86.753	ENSXMAG00000005537	prdm12b	100	86.010	Xiphophorus_maculatus
ENSOMEG00000004134	prdm12b	99	75.434	ENSXMAG00000028012	-	100	74.939	Xiphophorus_maculatus