EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000004210 (Gene tree)
Gene ID: 112145771
Gene Symbol: larp1b
Alias: -
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 29343 bases
Position: chrNVQA01000001.1:26452694-26482036
Accession: 112145771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000003282	La	PF05383.17	2.5e-20	1	1
ENSOMEP00000003297	La	PF05383.17	2.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000011067	-	4858	-	ENSOMEP00000003297	1073 (aa)	XP_024126992	UPI000CF7EE00
ENSOMET00000011091	-	4699	-	ENSOMEP00000003282	1020 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000004210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000004210's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000004210	larp1b	91	51.891	ENSOMEG00000003134	larp1	93	51.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000004210	larp1b	87	54.286	ENSG00000138709	LARP1B	97	55.640	Homo_sapiens
ENSOMEG00000004210	larp1b	100	80.911	ENSAPOG00000020101	larp1b	100	79.942	Acanthochromis_polyacanthus
ENSOMEG00000004210	larp1b	52	52.091	ENSAMEG00000002748	LARP1B	99	51.220	Ailuropoda_melanoleuca
ENSOMEG00000004210	larp1b	100	74.495	ENSACIG00000023890	larp1b	97	75.124	Amphilophus_citrinellus
ENSOMEG00000004210	larp1b	90	75.803	ENSAOCG00000014268	larp1b	99	74.598	Amphiprion_ocellaris
ENSOMEG00000004210	larp1b	100	80.193	ENSAPEG00000004126	larp1b	97	79.523	Amphiprion_percula
ENSOMEG00000004210	larp1b	100	79.251	ENSATEG00000017849	larp1b	100	78.770	Anabas_testudineus
ENSOMEG00000004210	larp1b	83	54.701	ENSAPLG00000010129	LARP1B	100	53.171	Anas_platyrhynchos
ENSOMEG00000004210	larp1b	84	55.661	ENSACAG00000011338	LARP1B	93	56.144	Anolis_carolinensis
ENSOMEG00000004210	larp1b	62	53.067	ENSANAG00000034618	LARP1B	68	56.424	Aotus_nancymaae
ENSOMEG00000004210	larp1b	100	77.594	ENSACLG00000011948	larp1b	100	77.544	Astatotilapia_calliptera
ENSOMEG00000004210	larp1b	93	58.460	ENSAMXG00000006805	larp1b	89	60.125	Astyanax_mexicanus
ENSOMEG00000004210	larp1b	86	55.464	ENSBTAG00000012135	LARP1B	95	50.000	Bos_taurus
ENSOMEG00000004210	larp1b	82	56.092	ENSCJAG00000003338	LARP1B	99	56.847	Callithrix_jacchus
ENSOMEG00000004210	larp1b	82	60.047	ENSCAFG00000003831	LARP1B	99	59.412	Canis_familiaris
ENSOMEG00000004210	larp1b	84	56.702	ENSCAFG00020018899	LARP1B	96	57.363	Canis_lupus_dingo
ENSOMEG00000004210	larp1b	84	54.507	ENSCHIG00000023144	LARP1B	97	53.242	Capra_hircus
ENSOMEG00000004210	larp1b	82	55.940	ENSCCAG00000021948	LARP1B	98	55.832	Cebus_capucinus
ENSOMEG00000004210	larp1b	82	54.978	ENSCATG00000013541	LARP1B	97	54.870	Cercocebus_atys
ENSOMEG00000004210	larp1b	82	55.879	ENSCSAG00000003582	LARP1B	97	56.000	Chlorocebus_sabaeus
ENSOMEG00000004210	larp1b	81	52.909	ENSCHOG00000005354	LARP1B	78	57.572	Choloepus_hoffmanni
ENSOMEG00000004210	larp1b	88	54.960	ENSCPBG00000017480	LARP1B	91	54.555	Chrysemys_picta_bellii
ENSOMEG00000004210	larp1b	81	56.419	ENSCANG00000026958	LARP1B	97	53.196	Colobus_angolensis_palliatus
ENSOMEG00000004210	larp1b	100	74.031	ENSCSEG00000013519	larp1b	97	74.652	Cynoglossus_semilaevis
ENSOMEG00000004210	larp1b	100	75.551	ENSCVAG00000005046	larp1b	97	76.560	Cyprinodon_variegatus
ENSOMEG00000004210	larp1b	94	62.926	ENSDARG00000061169	larp1b	90	63.481	Danio_rerio
ENSOMEG00000004210	larp1b	65	53.305	ENSETEG00000012497	LARP1B	75	53.161	Echinops_telfairi
ENSOMEG00000004210	larp1b	84	46.910	ENSEBUG00000003668	larp1b	93	46.266	Eptatretus_burgeri
ENSOMEG00000004210	larp1b	85	55.252	ENSEASG00005018106	LARP1B	99	55.069	Equus_asinus_asinus
ENSOMEG00000004210	larp1b	86	56.021	ENSECAG00000001088	LARP1B	86	54.619	Equus_caballus
ENSOMEG00000004210	larp1b	75	62.044	ENSELUG00000023774	larp1b	93	64.718	Esox_lucius
ENSOMEG00000004210	larp1b	50	50.181	ENSFCAG00000014650	-	99	49.727	Felis_catus
ENSOMEG00000004210	larp1b	82	54.919	ENSFALG00000008098	LARP1B	96	54.270	Ficedula_albicollis
ENSOMEG00000004210	larp1b	100	79.614	ENSFHEG00000010264	larp1b	93	81.168	Fundulus_heteroclitus
ENSOMEG00000004210	larp1b	88	68.627	ENSGMOG00000005207	larp1b	88	69.595	Gadus_morhua
ENSOMEG00000004210	larp1b	89	53.065	ENSGALG00000010207	LARP1B	91	53.653	Gallus_gallus
ENSOMEG00000004210	larp1b	89	80.371	ENSGAFG00000012012	larp1b	96	80.259	Gambusia_affinis
ENSOMEG00000004210	larp1b	100	68.053	ENSGACG00000004609	larp1b	97	68.831	Gasterosteus_aculeatus
ENSOMEG00000004210	larp1b	87	55.266	ENSGAGG00000017209	LARP1B	89	55.123	Gopherus_agassizii
ENSOMEG00000004210	larp1b	82	55.676	ENSGGOG00000015900	LARP1B	97	55.568	Gorilla_gorilla
ENSOMEG00000004210	larp1b	100	78.779	ENSHBUG00000009730	larp1b	100	78.585	Haplochromis_burtoni
ENSOMEG00000004210	larp1b	70	75.791	ENSHCOG00000000918	larp1b	96	79.111	Hippocampus_comes
ENSOMEG00000004210	larp1b	94	62.576	ENSIPUG00000012138	larp1b	87	63.646	Ictalurus_punctatus
ENSOMEG00000004210	larp1b	99	75.317	ENSKMAG00000011589	larp1b	99	75.374	Kryptolebias_marmoratus
ENSOMEG00000004210	larp1b	100	77.992	ENSLBEG00000005655	larp1b	97	78.097	Labrus_bergylta
ENSOMEG00000004210	larp1b	92	57.555	ENSLACG00000015247	LARP1B	90	57.555	Latimeria_chalumnae
ENSOMEG00000004210	larp1b	89	62.864	ENSLOCG00000010684	larp1b	97	57.658	Lepisosteus_oculatus
ENSOMEG00000004210	larp1b	82	55.952	ENSMFAG00000002218	LARP1B	97	55.844	Macaca_fascicularis
ENSOMEG00000004210	larp1b	82	55.952	ENSMMUG00000021347	LARP1B	97	55.844	Macaca_mulatta
ENSOMEG00000004210	larp1b	81	53.233	ENSMNEG00000030406	LARP1B	82	60.435	Macaca_nemestrina
ENSOMEG00000004210	larp1b	81	56.013	ENSMLEG00000009306	LARP1B	78	61.657	Mandrillus_leucophaeus
ENSOMEG00000004210	larp1b	99	79.167	ENSMAMG00000000081	larp1b	97	78.968	Mastacembelus_armatus
ENSOMEG00000004210	larp1b	73	80.991	ENSMZEG00005002545	larp1b	96	81.794	Maylandia_zebra
ENSOMEG00000004210	larp1b	81	54.339	ENSMGAG00000004809	LARP1B	74	57.437	Meleagris_gallopavo
ENSOMEG00000004210	larp1b	82	57.785	ENSMICG00000036111	LARP1B	97	56.923	Microcebus_murinus
ENSOMEG00000004210	larp1b	89	54.388	ENSMODG00000012300	LARP1B	90	53.003	Monodelphis_domestica
ENSOMEG00000004210	larp1b	100	78.488	ENSMALG00000003638	larp1b	97	78.764	Monopterus_albus
ENSOMEG00000004210	larp1b	89	55.354	ENSMPUG00000017365	LARP1B	90	53.996	Mustela_putorius_furo
ENSOMEG00000004210	larp1b	82	60.858	ENSMLUG00000010229	LARP1B	99	54.488	Myotis_lucifugus
ENSOMEG00000004210	larp1b	93	74.460	ENSNBRG00000023846	larp1b	100	75.349	Neolamprologus_brichardi
ENSOMEG00000004210	larp1b	82	55.292	ENSNLEG00000013819	LARP1B	97	55.184	Nomascus_leucogenys
ENSOMEG00000004210	larp1b	64	58.646	ENSMEUG00000010308	LARP1B	75	58.501	Notamacropus_eugenii
ENSOMEG00000004210	larp1b	74	51.884	ENSOPRG00000005478	LARP1B	79	53.333	Ochotona_princeps
ENSOMEG00000004210	larp1b	87	78.176	ENSONIG00000012386	larp1b	100	77.971	Oreochromis_niloticus
ENSOMEG00000004210	larp1b	82	55.592	ENSOCUG00000013330	LARP1B	96	54.835	Oryctolagus_cuniculus
ENSOMEG00000004210	larp1b	100	87.914	ENSORLG00000017954	larp1b	100	88.596	Oryzias_latipes
ENSOMEG00000004210	larp1b	100	87.708	ENSORLG00020013081	larp1b	100	88.355	Oryzias_latipes_hni
ENSOMEG00000004210	larp1b	100	88.109	ENSORLG00015009580	larp1b	100	88.000	Oryzias_latipes_hsok
ENSOMEG00000004210	larp1b	82	57.629	ENSOGAG00000005771	LARP1B	100	56.970	Otolemur_garnettii
ENSOMEG00000004210	larp1b	81	55.796	ENSOARG00000015300	LARP1B	97	54.951	Ovis_aries
ENSOMEG00000004210	larp1b	82	55.857	ENSPPAG00000030439	LARP1B	97	55.748	Pan_paniscus
ENSOMEG00000004210	larp1b	82	55.857	ENSPTRG00000016437	LARP1B	97	55.748	Pan_troglodytes
ENSOMEG00000004210	larp1b	82	55.952	ENSPANG00000012488	LARP1B	97	55.844	Papio_anubis
ENSOMEG00000004210	larp1b	88	55.022	ENSPKIG00000014360	larp1b	96	54.417	Paramormyrops_kingsleyae
ENSOMEG00000004210	larp1b	86	56.726	ENSPSIG00000012885	LARP1B	99	56.087	Pelodiscus_sinensis
ENSOMEG00000004210	larp1b	76	70.338	ENSPMGG00000007207	larp1b	91	72.906	Periophthalmus_magnuspinnatus
ENSOMEG00000004210	larp1b	63	56.633	ENSPMAG00000002700	larp1b	97	49.845	Petromyzon_marinus
ENSOMEG00000004210	larp1b	86	56.776	ENSPCIG00000026516	LARP1B	96	62.280	Phascolarctos_cinereus
ENSOMEG00000004210	larp1b	100	75.736	ENSPFOG00000019519	larp1b	98	76.535	Poecilia_formosa
ENSOMEG00000004210	larp1b	63	74.422	ENSPFOG00000022837	-	99	74.566	Poecilia_formosa
ENSOMEG00000004210	larp1b	100	76.691	ENSPLAG00000007115	larp1b	98	77.934	Poecilia_latipinna
ENSOMEG00000004210	larp1b	100	78.730	ENSPMEG00000001224	larp1b	98	79.980	Poecilia_mexicana
ENSOMEG00000004210	larp1b	84	53.682	ENSPCAG00000007546	LARP1B	99	53.690	Procavia_capensis
ENSOMEG00000004210	larp1b	73	63.636	ENSPCOG00000021874	LARP1B	97	63.636	Propithecus_coquereli
ENSOMEG00000004210	larp1b	83	52.402	ENSPVAG00000005373	LARP1B	97	52.193	Pteropus_vampyrus
ENSOMEG00000004210	larp1b	73	79.315	ENSPNYG00000017357	larp1b	96	80.105	Pundamilia_nyererei
ENSOMEG00000004210	larp1b	91	61.601	ENSPNAG00000008823	larp1b	89	63.868	Pygocentrus_nattereri
ENSOMEG00000004210	larp1b	82	56.169	ENSRROG00000030771	LARP1B	97	55.844	Rhinopithecus_roxellana
ENSOMEG00000004210	larp1b	61	51.783	ENSSHAG00000014474	LARP1B	99	50.647	Sarcophilus_harrisii
ENSOMEG00000004210	larp1b	84	82.263	ENSSMAG00000006347	larp1b	94	81.557	Scophthalmus_maximus
ENSOMEG00000004210	larp1b	100	79.692	ENSSDUG00000004182	larp1b	100	79.403	Seriola_dumerili
ENSOMEG00000004210	larp1b	95	73.156	ENSSLDG00000014613	larp1b	97	71.787	Seriola_lalandi_dorsalis
ENSOMEG00000004210	larp1b	80	56.186	ENSSPUG00000011837	LARP1B	94	56.052	Sphenodon_punctatus
ENSOMEG00000004210	larp1b	100	78.943	ENSSPAG00000017772	larp1b	97	79.326	Stegastes_partitus
ENSOMEG00000004210	larp1b	84	56.056	ENSSSCG00000034280	LARP1B	98	77.528	Sus_scrofa
ENSOMEG00000004210	larp1b	79	57.125	ENSTGUG00000002098	-	84	61.017	Taeniopygia_guttata
ENSOMEG00000004210	larp1b	99	74.561	ENSTRUG00000005612	larp1b	97	75.302	Takifugu_rubripes
ENSOMEG00000004210	larp1b	89	73.218	ENSTNIG00000012398	larp1b	93	81.037	Tetraodon_nigroviridis
ENSOMEG00000004210	larp1b	62	51.245	ENSTBEG00000004177	LARP1B	75	50.216	Tupaia_belangeri
ENSOMEG00000004210	larp1b	76	56.112	ENSTTRG00000012984	LARP1B	79	57.432	Tursiops_truncatus
ENSOMEG00000004210	larp1b	84	56.457	ENSUMAG00000007373	LARP1B	96	57.222	Ursus_maritimus
ENSOMEG00000004210	larp1b	66	55.508	ENSVPAG00000007223	LARP1B	77	55.226	Vicugna_pacos
ENSOMEG00000004210	larp1b	84	57.097	ENSVVUG00000011307	LARP1B	99	56.726	Vulpes_vulpes
ENSOMEG00000004210	larp1b	92	50.350	ENSXETG00000022512	larp1b	94	51.172	Xenopus_tropicalis
ENSOMEG00000004210	larp1b	89	72.061	ENSXCOG00000004435	larp1b	92	73.885	Xiphophorus_couchianus
ENSOMEG00000004210	larp1b	100	77.119	ENSXMAG00000008150	larp1b	97	78.558	Xiphophorus_maculatus