EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000004219 (Gene tree)
Gene ID: 112151079
Gene Symbol: nom1
Alias: -
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 7207 bases
Position: chrNVQA01000015.1:16206661-16213867
Accession: 112151079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000003300	MA3	PF02847.17	4.8e-22	1	1
ENSOMEP00000003312	MA3	PF02847.17	4.9e-22	1	1
ENSOMEP00000003312	MIF4G	PF02854.19	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000011063	-	2842	-	ENSOMEP00000003300	802 (aa)	-	-
ENSOMET00000011048	-	2935	-	ENSOMEP00000003312	833 (aa)	XP_024135499	UPI000CF7FE42

Gene Model

Click here to download ENSOMEG00000004219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000004219's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000004219	nom1	97	53.373	ENSG00000146909	NOM1	94	53.650	Homo_sapiens
ENSOMEG00000004219	nom1	64	87.242	ENSAPOG00000012073	nom1	100	75.498	Acanthochromis_polyacanthus
ENSOMEG00000004219	nom1	82	57.819	ENSAMEG00000001412	NOM1	71	65.107	Ailuropoda_melanoleuca
ENSOMEG00000004219	nom1	87	87.214	ENSACIG00000018050	nom1	99	87.214	Amphilophus_citrinellus
ENSOMEG00000004219	nom1	100	75.967	ENSAOCG00000006229	nom1	100	75.615	Amphiprion_ocellaris
ENSOMEG00000004219	nom1	100	76.471	ENSAPEG00000015994	nom1	100	76.000	Amphiprion_percula
ENSOMEG00000004219	nom1	100	72.749	ENSATEG00000005405	nom1	100	73.728	Anabas_testudineus
ENSOMEG00000004219	nom1	80	58.271	ENSAPLG00000006585	NOM1	78	66.797	Anas_platyrhynchos
ENSOMEG00000004219	nom1	80	56.691	ENSACAG00000011192	NOM1	61	66.346	Anolis_carolinensis
ENSOMEG00000004219	nom1	98	74.396	ENSACLG00000000033	nom1	98	74.007	Astatotilapia_calliptera
ENSOMEG00000004219	nom1	63	74.906	ENSAMXG00000041486	nom1	61	74.906	Astyanax_mexicanus
ENSOMEG00000004219	nom1	97	50.950	ENSBTAG00000016435	NOM1	62	64.098	Bos_taurus
ENSOMEG00000004219	nom1	98	52.764	ENSCJAG00000004336	NOM1	59	66.602	Callithrix_jacchus
ENSOMEG00000004219	nom1	97	50.060	ENSCAFG00020005121	NOM1	59	64.397	Canis_lupus_dingo
ENSOMEG00000004219	nom1	82	56.710	ENSCHIG00000020102	NOM1	62	64.205	Capra_hircus
ENSOMEG00000004219	nom1	97	53.874	ENSTSYG00000000227	NOM1	61	67.188	Carlito_syrichta
ENSOMEG00000004219	nom1	62	67.370	ENSCAPG00000016273	NOM1	97	68.173	Cavia_aperea
ENSOMEG00000004219	nom1	98	50.305	ENSCPOG00000025538	NOM1	60	63.934	Cavia_porcellus
ENSOMEG00000004219	nom1	89	67.619	ENSCCAG00000014944	NOM1	96	67.151	Cebus_capucinus
ENSOMEG00000004219	nom1	83	57.493	ENSCLAG00000000267	NOM1	61	65.571	Chinchilla_lanigera
ENSOMEG00000004219	nom1	70	68.821	ENSCPBG00000018215	NOM1	71	68.821	Chrysemys_picta_bellii
ENSOMEG00000004219	nom1	86	37.500	ENSCING00000005248	-	69	40.504	Ciona_intestinalis
ENSOMEG00000004219	nom1	62	66.284	ENSCANG00000041984	NOM1	88	67.188	Colobus_angolensis_palliatus
ENSOMEG00000004219	nom1	82	57.493	ENSCGRG00001020293	Nom1	59	66.798	Cricetulus_griseus_chok1gshd
ENSOMEG00000004219	nom1	62	66.089	ENSCGRG00000005405	Nom1	95	66.798	Cricetulus_griseus_crigri
ENSOMEG00000004219	nom1	94	68.546	ENSCSEG00000000932	nom1	96	64.994	Cynoglossus_semilaevis
ENSOMEG00000004219	nom1	98	71.344	ENSCVAG00000007562	nom1	99	71.581	Cyprinodon_variegatus
ENSOMEG00000004219	nom1	100	62.456	ENSDARG00000060027	nom1	97	74.841	Danio_rerio
ENSOMEG00000004219	nom1	62	55.323	ENSDORG00000015682	Nom1	97	48.994	Dipodomys_ordii
ENSOMEG00000004219	nom1	86	35.193	FBgn0035336	CG9004	60	38.536	Drosophila_melanogaster
ENSOMEG00000004219	nom1	75	56.398	ENSETEG00000003104	NOM1	62	57.282	Echinops_telfairi
ENSOMEG00000004219	nom1	52	51.481	ENSEBUG00000010077	nom1	89	53.465	Eptatretus_burgeri
ENSOMEG00000004219	nom1	83	59.169	ENSEASG00005001489	NOM1	79	59.366	Equus_asinus_asinus
ENSOMEG00000004219	nom1	68	64.085	ENSECAG00000007596	NOM1	55	67.641	Equus_caballus
ENSOMEG00000004219	nom1	66	78.832	ENSELUG00000006266	nom1	62	80.340	Esox_lucius
ENSOMEG00000004219	nom1	83	56.509	ENSFCAG00000006467	NOM1	64	64.461	Felis_catus
ENSOMEG00000004219	nom1	82	57.986	ENSFALG00000006904	NOM1	99	57.725	Ficedula_albicollis
ENSOMEG00000004219	nom1	97	53.076	ENSFDAG00000016241	NOM1	62	66.471	Fukomys_damarensis
ENSOMEG00000004219	nom1	98	70.617	ENSFHEG00000015974	nom1	99	70.764	Fundulus_heteroclitus
ENSOMEG00000004219	nom1	94	61.083	ENSGMOG00000005129	nom1	100	60.556	Gadus_morhua
ENSOMEG00000004219	nom1	81	57.391	ENSGALG00000006437	NOM1	59	66.211	Gallus_gallus
ENSOMEG00000004219	nom1	98	71.669	ENSGAFG00000003211	nom1	99	70.853	Gambusia_affinis
ENSOMEG00000004219	nom1	98	52.267	ENSGAGG00000014347	NOM1	88	63.498	Gopherus_agassizii
ENSOMEG00000004219	nom1	98	52.990	ENSGGOG00000010920	NOM1	75	57.768	Gorilla_gorilla
ENSOMEG00000004219	nom1	98	73.818	ENSHBUG00000014616	nom1	98	73.430	Haplochromis_burtoni
ENSOMEG00000004219	nom1	98	53.919	ENSHGLG00000007392	NOM1	59	68.039	Heterocephalus_glaber_female
ENSOMEG00000004219	nom1	89	67.197	ENSHGLG00100014407	NOM1	59	68.039	Heterocephalus_glaber_male
ENSOMEG00000004219	nom1	100	59.953	ENSIPUG00000013980	nom1	63	72.401	Ictalurus_punctatus
ENSOMEG00000004219	nom1	68	62.937	ENSSTOG00000031736	NOM1	89	67.843	Ictidomys_tridecemlineatus
ENSOMEG00000004219	nom1	58	68.172	ENSJJAG00000011716	Nom1	96	68.973	Jaculus_jaculus
ENSOMEG00000004219	nom1	98	71.093	ENSLBEG00000009252	nom1	100	73.108	Labrus_bergylta
ENSOMEG00000004219	nom1	84	62.801	ENSLACG00000011777	NOM1	64	68.927	Latimeria_chalumnae
ENSOMEG00000004219	nom1	98	62.788	ENSLOCG00000012452	nom1	100	61.418	Lepisosteus_oculatus
ENSOMEG00000004219	nom1	97	47.727	ENSLAFG00000007119	NOM1	77	59.619	Loxodonta_africana
ENSOMEG00000004219	nom1	97	51.621	ENSMMUG00000039033	NOM1	58	63.035	Macaca_mulatta
ENSOMEG00000004219	nom1	62	66.667	ENSMLEG00000037062	NOM1	96	67.773	Mandrillus_leucophaeus
ENSOMEG00000004219	nom1	100	73.318	ENSMAMG00000004118	nom1	100	71.783	Mastacembelus_armatus
ENSOMEG00000004219	nom1	98	74.275	ENSMZEG00005000384	nom1	98	73.887	Maylandia_zebra
ENSOMEG00000004219	nom1	84	57.405	ENSMGAG00000005051	NOM1	75	66.602	Meleagris_gallopavo
ENSOMEG00000004219	nom1	97	53.537	ENSMAUG00000017988	Nom1	61	67.780	Mesocricetus_auratus
ENSOMEG00000004219	nom1	66	62.996	ENSMICG00000017531	NOM1	62	64.818	Microcebus_murinus
ENSOMEG00000004219	nom1	68	63.093	ENSMOCG00000015962	Nom1	81	55.878	Microtus_ochrogaster
ENSOMEG00000004219	nom1	99	67.523	ENSMMOG00000004419	nom1	65	77.190	Mola_mola
ENSOMEG00000004219	nom1	66	66.367	ENSMODG00000005177	NOM1	80	59.571	Monodelphis_domestica
ENSOMEG00000004219	nom1	93	71.501	ENSMALG00000008800	nom1	99	71.142	Monopterus_albus
ENSOMEG00000004219	nom1	97	51.625	MGP_CAROLIEiJ_G0027043	Nom1	59	66.012	Mus_caroli
ENSOMEG00000004219	nom1	97	52.701	ENSMUSG00000001569	Nom1	59	66.208	Mus_musculus
ENSOMEG00000004219	nom1	97	52.278	MGP_SPRETEiJ_G0028039	Nom1	59	66.208	Mus_spretus
ENSOMEG00000004219	nom1	82	54.323	ENSMPUG00000009745	NOM1	74	62.963	Mustela_putorius_furo
ENSOMEG00000004219	nom1	71	61.046	ENSMLUG00000009129	NOM1	87	65.589	Myotis_lucifugus
ENSOMEG00000004219	nom1	98	74.368	ENSNBRG00000016429	nom1	95	85.255	Neolamprologus_brichardi
ENSOMEG00000004219	nom1	98	52.556	ENSNLEG00000000238	NOM1	94	51.816	Nomascus_leucogenys
ENSOMEG00000004219	nom1	71	56.440	ENSMEUG00000001108	NOM1	50	71.654	Notamacropus_eugenii
ENSOMEG00000004219	nom1	52	55.629	ENSOPRG00000014676	NOM1	51	54.662	Ochotona_princeps
ENSOMEG00000004219	nom1	83	57.554	ENSODEG00000009399	NOM1	73	65.625	Octodon_degus
ENSOMEG00000004219	nom1	94	75.251	ENSONIG00000005958	nom1	100	75.377	Oreochromis_niloticus
ENSOMEG00000004219	nom1	56	67.819	ENSOANG00000006139	-	97	68.261	Ornithorhynchus_anatinus
ENSOMEG00000004219	nom1	94	45.238	ENSOCUG00000021448	-	85	54.913	Oryctolagus_cuniculus
ENSOMEG00000004219	nom1	97	53.430	ENSOCUG00000004071	-	60	67.248	Oryctolagus_cuniculus
ENSOMEG00000004219	nom1	100	88.517	ENSORLG00000010541	nom1	100	88.517	Oryzias_latipes
ENSOMEG00000004219	nom1	93	88.273	ENSORLG00020010789	nom1	99	87.906	Oryzias_latipes_hni
ENSOMEG00000004219	nom1	100	88.425	ENSORLG00015010475	nom1	100	88.067	Oryzias_latipes_hsok
ENSOMEG00000004219	nom1	70	61.953	ENSOGAG00000001124	NOM1	86	66.539	Otolemur_garnettii
ENSOMEG00000004219	nom1	82	56.277	ENSOARG00000007261	NOM1	71	64.015	Ovis_aries
ENSOMEG00000004219	nom1	82	60.116	ENSPPAG00000041374	NOM1	81	58.051	Pan_paniscus
ENSOMEG00000004219	nom1	83	56.101	ENSPTIG00000013532	NOM1	72	64.151	Panthera_tigris_altaica
ENSOMEG00000004219	nom1	82	60.116	ENSPTRG00000019917	NOM1	81	58.051	Pan_troglodytes
ENSOMEG00000004219	nom1	97	53.855	ENSPANG00000007605	NOM1	79	58.501	Papio_anubis
ENSOMEG00000004219	nom1	100	58.706	ENSPKIG00000005825	nom1	100	57.661	Paramormyrops_kingsleyae
ENSOMEG00000004219	nom1	65	67.468	ENSPSIG00000017848	NOM1	89	67.468	Pelodiscus_sinensis
ENSOMEG00000004219	nom1	100	69.586	ENSPMGG00000002577	nom1	66	81.614	Periophthalmus_magnuspinnatus
ENSOMEG00000004219	nom1	97	52.308	ENSPEMG00000024180	Nom1	59	68.173	Peromyscus_maniculatus_bairdii
ENSOMEG00000004219	nom1	99	51.230	ENSPCIG00000027941	NOM1	77	63.188	Phascolarctos_cinereus
ENSOMEG00000004219	nom1	100	71.749	ENSPFOG00000015771	nom1	100	72.104	Poecilia_formosa
ENSOMEG00000004219	nom1	64	83.302	ENSPLAG00000007856	nom1	100	70.095	Poecilia_latipinna
ENSOMEG00000004219	nom1	100	72.459	ENSPMEG00000014155	nom1	100	71.986	Poecilia_mexicana
ENSOMEG00000004219	nom1	98	71.394	ENSPREG00000008850	nom1	99	71.378	Poecilia_reticulata
ENSOMEG00000004219	nom1	98	50.777	ENSPPYG00000018222	NOM1	58	62.500	Pongo_abelii
ENSOMEG00000004219	nom1	69	61.628	ENSPCAG00000000440	NOM1	67	61.628	Procavia_capensis
ENSOMEG00000004219	nom1	62	65.458	ENSPCOG00000015222	NOM1	96	66.342	Propithecus_coquereli
ENSOMEG00000004219	nom1	82	56.818	ENSPVAG00000014760	NOM1	62	63.483	Pteropus_vampyrus
ENSOMEG00000004219	nom1	98	74.396	ENSPNYG00000006975	nom1	96	84.230	Pundamilia_nyererei
ENSOMEG00000004219	nom1	65	72.344	ENSPNAG00000011085	nom1	60	73.684	Pygocentrus_nattereri
ENSOMEG00000004219	nom1	97	50.898	ENSRNOG00000048969	AABR07059041.1	63	63.851	Rattus_norvegicus
ENSOMEG00000004219	nom1	94	55.138	ENSRBIG00000037042	NOM1	59	67.578	Rhinopithecus_bieti
ENSOMEG00000004219	nom1	98	53.349	ENSRROG00000037293	NOM1	59	67.188	Rhinopithecus_roxellana
ENSOMEG00000004219	nom1	57	55.950	ENSSHAG00000002835	-	99	62.136	Sarcophilus_harrisii
ENSOMEG00000004219	nom1	65	67.468	ENSSHAG00000017998	-	75	70.117	Sarcophilus_harrisii
ENSOMEG00000004219	nom1	58	72.257	ENSSFOG00015003196	nom1	99	72.257	Scleropages_formosus
ENSOMEG00000004219	nom1	100	72.588	ENSSMAG00000011047	nom1	100	72.047	Scophthalmus_maximus
ENSOMEG00000004219	nom1	98	74.582	ENSSDUG00000006834	nom1	100	74.205	Seriola_dumerili
ENSOMEG00000004219	nom1	98	73.381	ENSSLDG00000021812	nom1	100	73.208	Seriola_lalandi_dorsalis
ENSOMEG00000004219	nom1	83	52.023	ENSSPUG00000002556	NOM1	99	57.330	Sphenodon_punctatus
ENSOMEG00000004219	nom1	98	75.822	ENSSPAG00000000953	nom1	100	75.638	Stegastes_partitus
ENSOMEG00000004219	nom1	82	57.698	ENSTGUG00000000702	-	75	66.920	Taeniopygia_guttata
ENSOMEG00000004219	nom1	98	66.905	ENSTRUG00000010239	nom1	100	67.723	Takifugu_rubripes
ENSOMEG00000004219	nom1	98	67.107	ENSTNIG00000012783	nom1	100	66.547	Tetraodon_nigroviridis
ENSOMEG00000004219	nom1	82	58.023	ENSUAMG00000025450	NOM1	60	65.067	Ursus_americanus
ENSOMEG00000004219	nom1	83	57.752	ENSUMAG00000014275	NOM1	84	64.062	Ursus_maritimus
ENSOMEG00000004219	nom1	76	66.359	ENSVVUG00000002608	NOM1	58	67.464	Vulpes_vulpes
ENSOMEG00000004219	nom1	91	53.009	ENSXETG00000021611	nom1	82	70.732	Xenopus_tropicalis
ENSOMEG00000004219	nom1	98	71.942	ENSXMAG00000002451	nom1	99	70.651	Xiphophorus_maculatus