EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000004220 (Gene tree)
Gene ID: -
Gene Symbol: zgc:153215
Alias: -
Full Name: zgc:153215
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 1908 bases
Position: chrNVQA01000006.1:8933789-8935696
Accession: ZDB-GENE-061103-58
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000003305	RRM_1	PF00076.22	2.5e-20	1	2
ENSOMEP00000003305	RRM_1	PF00076.22	2.5e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000011055	-	1278	-	ENSOMEP00000003305	425 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000004220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000004220's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000004220	zgc:153215	100	30.928	ENSOMEG00000022523	rbm12b	74	30.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000004220	zgc:153215	93	47.816	ENSAPOG00000008836	zgc:153215	95	47.356	Acanthochromis_polyacanthus
ENSOMEG00000004220	zgc:153215	97	32.488	ENSACIG00000014943	rbm12b	97	32.715	Amphilophus_citrinellus
ENSOMEG00000004220	zgc:153215	94	45.473	ENSACIG00000013317	zgc:153215	98	43.827	Amphilophus_citrinellus
ENSOMEG00000004220	zgc:153215	96	44.399	ENSAOCG00000010819	zgc:153215	99	45.214	Amphiprion_ocellaris
ENSOMEG00000004220	zgc:153215	96	30.723	ENSAPEG00000022079	rbm12b	99	32.056	Amphiprion_percula
ENSOMEG00000004220	zgc:153215	98	30.801	ENSATEG00000004578	rbm12b	74	30.849	Anabas_testudineus
ENSOMEG00000004220	zgc:153215	97	74.390	ENSATEG00000001886	zgc:153215	77	74.390	Anabas_testudineus
ENSOMEG00000004220	zgc:153215	89	32.258	ENSACLG00000005578	rbm12b	60	32.093	Astatotilapia_calliptera
ENSOMEG00000004220	zgc:153215	96	46.063	ENSACLG00000007675	zgc:153215	91	67.073	Astatotilapia_calliptera
ENSOMEG00000004220	zgc:153215	90	52.222	ENSAMXG00000020853	zgc:153215	68	53.659	Astyanax_mexicanus
ENSOMEG00000004220	zgc:153215	97	30.233	ENSCSEG00000004610	rbm12b	70	30.064	Cynoglossus_semilaevis
ENSOMEG00000004220	zgc:153215	71	48.256	ENSCSEG00000001575	-	99	48.256	Cynoglossus_semilaevis
ENSOMEG00000004220	zgc:153215	96	42.927	ENSCVAG00000009259	-	99	42.927	Cyprinodon_variegatus
ENSOMEG00000004220	zgc:153215	92	53.684	ENSDARG00000055889	zgc:153215	79	57.500	Danio_rerio
ENSOMEG00000004220	zgc:153215	96	42.049	ENSELUG00000009039	zgc:153215	90	36.667	Esox_lucius
ENSOMEG00000004220	zgc:153215	98	30.042	ENSFHEG00000016425	rbm12b	74	30.252	Fundulus_heteroclitus
ENSOMEG00000004220	zgc:153215	95	51.111	ENSFHEG00000014539	zgc:153215	96	51.111	Fundulus_heteroclitus
ENSOMEG00000004220	zgc:153215	97	31.368	ENSGMOG00000013467	rbm12b	75	30.737	Gadus_morhua
ENSOMEG00000004220	zgc:153215	95	43.927	ENSGAFG00000007845	zgc:153215	98	43.927	Gambusia_affinis
ENSOMEG00000004220	zgc:153215	98	31.144	ENSGACG00000008682	rbm12b	74	30.932	Gasterosteus_aculeatus
ENSOMEG00000004220	zgc:153215	92	66.304	ENSHBUG00000016150	zgc:153215	79	67.073	Haplochromis_burtoni
ENSOMEG00000004220	zgc:153215	91	50.538	ENSIPUG00000019731	zgc:153215	77	55.000	Ictalurus_punctatus
ENSOMEG00000004220	zgc:153215	96	30.149	ENSIPUG00000001167	RBM12B	72	30.149	Ictalurus_punctatus
ENSOMEG00000004220	zgc:153215	96	52.740	ENSKMAG00000004958	zgc:153215	99	52.740	Kryptolebias_marmoratus
ENSOMEG00000004220	zgc:153215	96	30.508	ENSKMAG00000013715	rbm12b	74	30.556	Kryptolebias_marmoratus
ENSOMEG00000004220	zgc:153215	96	31.144	ENSKMAG00000013704	rbm12b	71	31.197	Kryptolebias_marmoratus
ENSOMEG00000004220	zgc:153215	96	48.643	ENSLBEG00000002597	zgc:153215	99	49.061	Labrus_bergylta
ENSOMEG00000004220	zgc:153215	96	31.377	ENSLOCG00000018344	rbm12b	75	30.769	Lepisosteus_oculatus
ENSOMEG00000004220	zgc:153215	96	53.906	ENSMAMG00000012038	zgc:153215	79	69.512	Mastacembelus_armatus
ENSOMEG00000004220	zgc:153215	98	32.568	ENSMAMG00000011998	rbm12b	75	31.942	Mastacembelus_armatus
ENSOMEG00000004220	zgc:153215	92	66.304	ENSMZEG00005005435	zgc:153215	79	67.073	Maylandia_zebra
ENSOMEG00000004220	zgc:153215	96	52.427	ENSMMOG00000003372	zgc:153215	99	51.887	Mola_mola
ENSOMEG00000004220	zgc:153215	96	50.652	ENSMALG00000001222	zgc:153215	99	50.000	Monopterus_albus
ENSOMEG00000004220	zgc:153215	92	67.391	ENSNBRG00000013644	zgc:153215	79	67.073	Neolamprologus_brichardi
ENSOMEG00000004220	zgc:153215	92	66.304	ENSONIG00000006054	zgc:153215	84	67.073	Oreochromis_niloticus
ENSOMEG00000004220	zgc:153215	96	31.197	ENSORLG00000008228	rbm12b	71	30.454	Oryzias_latipes
ENSOMEG00000004220	zgc:153215	96	31.410	ENSORLG00020013619	rbm12b	71	30.670	Oryzias_latipes_hni
ENSOMEG00000004220	zgc:153215	96	31.410	ENSORLG00015019999	rbm12b	71	30.670	Oryzias_latipes_hsok
ENSOMEG00000004220	zgc:153215	95	35.113	ENSPKIG00000014851	zgc:153215	81	49.367	Paramormyrops_kingsleyae
ENSOMEG00000004220	zgc:153215	92	58.763	ENSPFOG00000017451	zgc:153215	65	65.000	Poecilia_formosa
ENSOMEG00000004220	zgc:153215	98	30.538	ENSPFOG00000020937	rbm12b	72	30.323	Poecilia_formosa
ENSOMEG00000004220	zgc:153215	96	46.018	ENSPLAG00000000232	zgc:153215	99	46.256	Poecilia_latipinna
ENSOMEG00000004220	zgc:153215	96	47.884	ENSPMEG00000016662	zgc:153215	99	47.321	Poecilia_mexicana
ENSOMEG00000004220	zgc:153215	96	44.603	ENSPREG00000018608	zgc:153215	99	44.603	Poecilia_reticulata
ENSOMEG00000004220	zgc:153215	96	53.186	ENSPNYG00000018125	zgc:153215	97	52.941	Pundamilia_nyererei
ENSOMEG00000004220	zgc:153215	96	41.964	ENSPNAG00000025628	zgc:153215	81	41.964	Pygocentrus_nattereri
ENSOMEG00000004220	zgc:153215	99	30.375	ENSSFOG00015001584	rbm12b	76	30.375	Scleropages_formosus
ENSOMEG00000004220	zgc:153215	96	36.082	ENSSFOG00015009427	zgc:153215	83	53.659	Scleropages_formosus
ENSOMEG00000004220	zgc:153215	98	31.198	ENSSMAG00000019708	rbm12b	75	30.372	Scophthalmus_maximus
ENSOMEG00000004220	zgc:153215	98	49.180	ENSSMAG00000019013	zgc:153215	98	48.566	Scophthalmus_maximus
ENSOMEG00000004220	zgc:153215	97	47.336	ENSSDUG00000012545	zgc:153215	99	46.869	Seriola_dumerili
ENSOMEG00000004220	zgc:153215	97	65.432	ENSSLDG00000013581	zgc:153215	78	64.634	Seriola_lalandi_dorsalis
ENSOMEG00000004220	zgc:153215	92	46.067	ENSSPUG00000016954	RBM12B	76	48.780	Sphenodon_punctatus
ENSOMEG00000004220	zgc:153215	96	50.816	ENSSPAG00000023584	zgc:153215	98	50.583	Stegastes_partitus
ENSOMEG00000004220	zgc:153215	72	41.902	ENSTNIG00000018374	-	99	40.554	Tetraodon_nigroviridis
ENSOMEG00000004220	zgc:153215	96	31.674	ENSXETG00000014696	rbm12b	68	31.674	Xenopus_tropicalis
ENSOMEG00000004220	zgc:153215	96	30.631	ENSXETG00000014694	rbm12b	100	31.011	Xenopus_tropicalis
ENSOMEG00000004220	zgc:153215	96	44.286	ENSXCOG00000019654	zgc:153215	98	44.286	Xiphophorus_couchianus
ENSOMEG00000004220	zgc:153215	60	32.877	ENSXCOG00000019735	-	99	32.990	Xiphophorus_couchianus
ENSOMEG00000004220	zgc:153215	83	48.913	ENSXMAG00000013169	-	99	37.716	Xiphophorus_maculatus
ENSOMEG00000004220	zgc:153215	98	30.561	ENSXMAG00000014213	rbm12b	75	30.625	Xiphophorus_maculatus