EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000004345 (Gene tree)
Gene ID: 112143311
Gene Symbol: rad54b
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 5323 bases
Position: chrNVQA01000006.1:8884956-8890278
Accession: ZDB-GENE-060810-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000003419	ResIII	PF04851.15	3.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000010866	-	2298	-	ENSOMEP00000003419	765 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000004345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000004345's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000004345	rad54b	92	42.585	ENSOMEG00000007770	rad54l	89	44.461

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000004345	rad54b	94	59.234	ENSG00000265817	FSBP	99	59.234	Homo_sapiens
ENSOMEG00000004345	rad54b	99	59.355	ENSG00000197275	RAD54B	84	59.355	Homo_sapiens
ENSOMEG00000004345	rad54b	99	60.387	ENSAMEG00000005834	-	84	60.387	Ailuropoda_melanoleuca
ENSOMEG00000004345	rad54b	100	85.640	ENSACIG00000013005	rad54b	87	85.640	Amphilophus_citrinellus
ENSOMEG00000004345	rad54b	100	84.367	ENSAOCG00000008523	rad54b	84	84.367	Amphiprion_ocellaris
ENSOMEG00000004345	rad54b	100	81.984	ENSAPEG00000001673	rad54b	87	81.984	Amphiprion_percula
ENSOMEG00000004345	rad54b	100	83.399	ENSATEG00000001527	rad54b	89	83.399	Anabas_testudineus
ENSOMEG00000004345	rad54b	99	62.403	ENSAPLG00000014366	-	84	62.403	Anas_platyrhynchos
ENSOMEG00000004345	rad54b	99	60.208	ENSACAG00000003671	-	95	60.208	Anolis_carolinensis
ENSOMEG00000004345	rad54b	83	61.515	ENSANAG00000019528	-	99	61.515	Aotus_nancymaae
ENSOMEG00000004345	rad54b	100	86.346	ENSACLG00000007826	rad54b	90	86.346	Astatotilapia_calliptera
ENSOMEG00000004345	rad54b	99	68.668	ENSAMXG00000039985	rad54b	92	68.482	Astyanax_mexicanus
ENSOMEG00000004345	rad54b	99	60.853	ENSBTAG00000000632	RAD54B	84	60.853	Bos_taurus
ENSOMEG00000004345	rad54b	90	35.417	WBGene00013792	Y116A8C.13	80	36.100	Caenorhabditis_elegans
ENSOMEG00000004345	rad54b	99	60.129	ENSCJAG00000000080	-	99	59.508	Callithrix_jacchus
ENSOMEG00000004345	rad54b	99	60.516	ENSCAFG00000009179	RAD54B	84	60.516	Canis_familiaris
ENSOMEG00000004345	rad54b	99	60.516	ENSCAFG00020012084	-	84	60.516	Canis_lupus_dingo
ENSOMEG00000004345	rad54b	99	60.982	ENSCHIG00000008230	-	84	60.982	Capra_hircus
ENSOMEG00000004345	rad54b	99	60.155	ENSTSYG00000013234	-	84	60.155	Carlito_syrichta
ENSOMEG00000004345	rad54b	99	60.719	ENSCPOG00000011643	-	85	60.719	Cavia_porcellus
ENSOMEG00000004345	rad54b	99	59.742	ENSCCAG00000011754	-	99	59.097	Cebus_capucinus
ENSOMEG00000004345	rad54b	99	59.250	ENSCATG00000030661	-	99	59.122	Cercocebus_atys
ENSOMEG00000004345	rad54b	99	59.692	ENSCLAG00000010476	-	87	59.692	Chinchilla_lanigera
ENSOMEG00000004345	rad54b	99	59.073	ENSCSAG00000012712	-	84	59.073	Chlorocebus_sabaeus
ENSOMEG00000004345	rad54b	99	62.420	ENSCPBG00000003204	-	84	62.420	Chrysemys_picta_bellii
ENSOMEG00000004345	rad54b	99	59.638	ENSCANG00000017939	-	99	59.396	Colobus_angolensis_palliatus
ENSOMEG00000004345	rad54b	99	58.786	ENSCGRG00001020184	Rad54b	86	58.786	Cricetulus_griseus_chok1gshd
ENSOMEG00000004345	rad54b	99	57.623	ENSCGRG00000016752	Rad54b	86	57.623	Cricetulus_griseus_crigri
ENSOMEG00000004345	rad54b	99	79.869	ENSCSEG00000001601	rad54b	91	79.869	Cynoglossus_semilaevis
ENSOMEG00000004345	rad54b	100	83.636	ENSCVAG00000009200	rad54b	87	83.636	Cyprinodon_variegatus
ENSOMEG00000004345	rad54b	99	68.052	ENSDARG00000092134	rad54b	99	69.531	Danio_rerio
ENSOMEG00000004345	rad54b	99	60.543	ENSDNOG00000015535	-	84	60.543	Dasypus_novemcinctus
ENSOMEG00000004345	rad54b	99	59.642	ENSDORG00000002492	Rad54b	88	59.642	Dipodomys_ordii
ENSOMEG00000004345	rad54b	85	63.014	ENSETEG00000010605	-	83	63.014	Echinops_telfairi
ENSOMEG00000004345	rad54b	99	50.771	ENSEBUG00000009104	rad54b	82	50.771	Eptatretus_burgeri
ENSOMEG00000004345	rad54b	99	59.359	ENSEASG00005004021	-	87	59.359	Equus_asinus_asinus
ENSOMEG00000004345	rad54b	99	59.744	ENSECAG00000021949	-	90	59.744	Equus_caballus
ENSOMEG00000004345	rad54b	85	54.878	ENSEEUG00000008056	-	72	54.878	Erinaceus_europaeus
ENSOMEG00000004345	rad54b	100	76.554	ENSELUG00000009287	rad54b	82	76.554	Esox_lucius
ENSOMEG00000004345	rad54b	99	60.077	ENSFCAG00000015513	-	99	60.136	Felis_catus
ENSOMEG00000004345	rad54b	99	61.966	ENSFALG00000005467	-	83	61.966	Ficedula_albicollis
ENSOMEG00000004345	rad54b	99	60.673	ENSFDAG00000020541	-	84	60.673	Fukomys_damarensis
ENSOMEG00000004345	rad54b	100	80.052	ENSFHEG00000014382	rad54b	85	80.181	Fundulus_heteroclitus
ENSOMEG00000004345	rad54b	100	79.408	ENSGMOG00000014774	rad54b	97	79.408	Gadus_morhua
ENSOMEG00000004345	rad54b	99	62.420	ENSGALG00000043597	RAD54B	83	62.420	Gallus_gallus
ENSOMEG00000004345	rad54b	99	84.156	ENSGAFG00000007901	rad54b	90	84.031	Gambusia_affinis
ENSOMEG00000004345	rad54b	99	81.842	ENSGACG00000009128	rad54b	84	81.842	Gasterosteus_aculeatus
ENSOMEG00000004345	rad54b	99	61.905	ENSGAGG00000018747	-	83	61.905	Gopherus_agassizii
ENSOMEG00000004345	rad54b	99	59.226	ENSGGOG00000023516	-	85	59.226	Gorilla_gorilla
ENSOMEG00000004345	rad54b	100	86.010	ENSHBUG00000016017	rad54b	83	86.010	Haplochromis_burtoni
ENSOMEG00000004345	rad54b	99	59.770	ENSHGLG00000008263	RAD54B	84	59.770	Heterocephalus_glaber_female
ENSOMEG00000004345	rad54b	99	58.935	ENSHGLG00100008108	-	84	58.935	Heterocephalus_glaber_male
ENSOMEG00000004345	rad54b	99	76.333	ENSHCOG00000004764	rad54b	96	73.885	Hippocampus_comes
ENSOMEG00000004345	rad54b	99	67.179	ENSIPUG00000018531	rad54b	82	67.179	Ictalurus_punctatus
ENSOMEG00000004345	rad54b	99	59.144	ENSSTOG00000010791	-	84	59.144	Ictidomys_tridecemlineatus
ENSOMEG00000004345	rad54b	99	59.050	ENSJJAG00000010314	Rad54b	84	59.050	Jaculus_jaculus
ENSOMEG00000004345	rad54b	99	82.068	ENSKMAG00000004744	rad54b	89	82.068	Kryptolebias_marmoratus
ENSOMEG00000004345	rad54b	97	64.106	ENSLACG00000000859	-	100	64.106	Latimeria_chalumnae
ENSOMEG00000004345	rad54b	100	66.751	ENSLOCG00000010100	rad54b	92	67.816	Lepisosteus_oculatus
ENSOMEG00000004345	rad54b	99	58.793	ENSLAFG00000015315	-	95	58.793	Loxodonta_africana
ENSOMEG00000004345	rad54b	99	59.250	ENSMFAG00000031629	-	99	59.122	Macaca_fascicularis
ENSOMEG00000004345	rad54b	99	59.250	ENSMMUG00000005659	-	84	59.250	Macaca_mulatta
ENSOMEG00000004345	rad54b	99	59.120	ENSMNEG00000016408	-	84	59.120	Macaca_nemestrina
ENSOMEG00000004345	rad54b	99	59.250	ENSMLEG00000006946	-	84	59.250	Mandrillus_leucophaeus
ENSOMEG00000004345	rad54b	100	81.783	ENSMAMG00000012269	rad54b	88	81.783	Mastacembelus_armatus
ENSOMEG00000004345	rad54b	100	86.346	ENSMZEG00005005281	rad54b	93	86.346	Maylandia_zebra
ENSOMEG00000004345	rad54b	99	61.469	ENSMGAG00000012024	-	83	61.469	Meleagris_gallopavo
ENSOMEG00000004345	rad54b	99	58.656	ENSMAUG00000013586	Rad54b	86	58.656	Mesocricetus_auratus
ENSOMEG00000004345	rad54b	99	59.407	ENSMICG00000000754	-	88	59.407	Microcebus_murinus
ENSOMEG00000004345	rad54b	99	58.634	ENSMOCG00000020035	Rad54b	86	58.634	Microtus_ochrogaster
ENSOMEG00000004345	rad54b	99	82.415	ENSMMOG00000003394	rad54b	87	82.415	Mola_mola
ENSOMEG00000004345	rad54b	99	59.640	ENSMODG00000007343	-	94	59.640	Monodelphis_domestica
ENSOMEG00000004345	rad54b	83	84.724	ENSMALG00000001520	rad54b	100	84.724	Monopterus_albus
ENSOMEG00000004345	rad54b	99	59.897	MGP_CAROLIEiJ_G0025810	Rad54b	85	59.897	Mus_caroli
ENSOMEG00000004345	rad54b	99	58.968	ENSMUSG00000078773	Rad54b	85	58.968	Mus_musculus
ENSOMEG00000004345	rad54b	99	59.508	MGP_PahariEiJ_G0023933	Rad54b	85	59.508	Mus_pahari
ENSOMEG00000004345	rad54b	99	59.792	MGP_SPRETEiJ_G0026758	Rad54b	85	59.792	Mus_spretus
ENSOMEG00000004345	rad54b	99	60.387	ENSMPUG00000008878	-	95	60.387	Mustela_putorius_furo
ENSOMEG00000004345	rad54b	99	60.256	ENSMLUG00000008953	-	84	60.256	Myotis_lucifugus
ENSOMEG00000004345	rad54b	99	59.331	ENSNGAG00000017537	Rad54b	85	59.331	Nannospalax_galili
ENSOMEG00000004345	rad54b	100	86.476	ENSNBRG00000013394	rad54b	90	86.476	Neolamprologus_brichardi
ENSOMEG00000004345	rad54b	99	59.226	ENSNLEG00000003062	-	99	59.097	Nomascus_leucogenys
ENSOMEG00000004345	rad54b	80	61.930	ENSMEUG00000012426	-	67	61.930	Notamacropus_eugenii
ENSOMEG00000004345	rad54b	99	60.903	ENSODEG00000019564	-	85	60.903	Octodon_degus
ENSOMEG00000004345	rad54b	87	75.000	ENSODEG00000002650	-	90	75.000	Octodon_degus
ENSOMEG00000004345	rad54b	100	86.528	ENSONIG00000006067	rad54b	85	86.528	Oreochromis_niloticus
ENSOMEG00000004345	rad54b	98	60.944	ENSOANG00000011348	-	99	60.944	Ornithorhynchus_anatinus
ENSOMEG00000004345	rad54b	99	60.103	ENSOCUG00000016478	-	84	60.103	Oryctolagus_cuniculus
ENSOMEG00000004345	rad54b	100	91.462	ENSORLG00000008918	rad54b	100	94.557	Oryzias_latipes
ENSOMEG00000004345	rad54b	83	94.401	ENSORLG00020012171	rad54b	100	94.401	Oryzias_latipes_hni
ENSOMEG00000004345	rad54b	100	91.085	ENSORLG00015018536	rad54b	83	91.085	Oryzias_latipes_hsok
ENSOMEG00000004345	rad54b	99	58.215	ENSOGAG00000007854	-	84	58.215	Otolemur_garnettii
ENSOMEG00000004345	rad54b	99	60.746	ENSOARG00000007691	-	95	60.746	Ovis_aries
ENSOMEG00000004345	rad54b	99	57.806	ENSPPAG00000029572	-	84	57.806	Pan_paniscus
ENSOMEG00000004345	rad54b	99	59.949	ENSPPRG00000007571	-	99	60.000	Panthera_pardus
ENSOMEG00000004345	rad54b	94	60.000	ENSPTIG00000012670	-	99	60.000	Panthera_tigris_altaica
ENSOMEG00000004345	rad54b	99	59.097	ENSPTRG00000020427	-	99	58.960	Pan_troglodytes
ENSOMEG00000004345	rad54b	99	59.250	ENSPANG00000019566	-	84	59.250	Papio_anubis
ENSOMEG00000004345	rad54b	99	69.201	ENSPKIG00000014974	rad54b	84	69.201	Paramormyrops_kingsleyae
ENSOMEG00000004345	rad54b	99	61.047	ENSPSIG00000002383	-	94	61.047	Pelodiscus_sinensis
ENSOMEG00000004345	rad54b	99	59.638	ENSPEMG00000012133	Rad54b	86	59.638	Peromyscus_maniculatus_bairdii
ENSOMEG00000004345	rad54b	99	58.376	ENSPMAG00000002916	rad54b	96	58.687	Petromyzon_marinus
ENSOMEG00000004345	rad54b	99	60.078	ENSPCIG00000020151	-	89	59.948	Phascolarctos_cinereus
ENSOMEG00000004345	rad54b	99	84.545	ENSPFOG00000023411	rad54b	82	84.545	Poecilia_formosa
ENSOMEG00000004345	rad54b	99	84.156	ENSPLAG00000010430	rad54b	82	84.156	Poecilia_latipinna
ENSOMEG00000004345	rad54b	99	84.545	ENSPMEG00000016873	rad54b	91	82.461	Poecilia_mexicana
ENSOMEG00000004345	rad54b	99	84.424	ENSPREG00000018443	rad54b	88	84.424	Poecilia_reticulata
ENSOMEG00000004345	rad54b	99	59.226	ENSPPYG00000018750	-	84	59.226	Pongo_abelii
ENSOMEG00000004345	rad54b	99	59.615	ENSPCOG00000026845	-	99	59.239	Propithecus_coquereli
ENSOMEG00000004345	rad54b	96	59.043	ENSPVAG00000000261	-	86	59.043	Pteropus_vampyrus
ENSOMEG00000004345	rad54b	100	84.355	ENSPNYG00000018303	rad54b	94	84.355	Pundamilia_nyererei
ENSOMEG00000004345	rad54b	99	68.475	ENSPNAG00000000295	rad54b	90	68.270	Pygocentrus_nattereri
ENSOMEG00000004345	rad54b	99	58.839	ENSRNOG00000039949	Rad54b	86	58.839	Rattus_norvegicus
ENSOMEG00000004345	rad54b	99	59.073	ENSRBIG00000020419	-	84	59.073	Rhinopithecus_bieti
ENSOMEG00000004345	rad54b	99	59.073	ENSRROG00000039897	-	84	59.073	Rhinopithecus_roxellana
ENSOMEG00000004345	rad54b	77	40.495	YBR073W	RDH54	64	40.495	Saccharomyces_cerevisiae
ENSOMEG00000004345	rad54b	99	59.690	ENSSBOG00000028501	-	84	59.690	Saimiri_boliviensis_boliviensis
ENSOMEG00000004345	rad54b	99	61.240	ENSSHAG00000017038	-	83	61.240	Sarcophilus_harrisii
ENSOMEG00000004345	rad54b	74	72.535	ENSSFOG00015008483	rad54b	89	72.535	Scleropages_formosus
ENSOMEG00000004345	rad54b	99	83.658	ENSSMAG00000018659	rad54b	89	82.597	Scophthalmus_maximus
ENSOMEG00000004345	rad54b	96	84.791	ENSSDUG00000001122	rad54b	78	84.791	Seriola_dumerili
ENSOMEG00000004345	rad54b	100	84.217	ENSSLDG00000013787	rad54b	89	79.688	Seriola_lalandi_dorsalis
ENSOMEG00000004345	rad54b	99	62.148	ENSSPUG00000016497	-	87	62.148	Sphenodon_punctatus
ENSOMEG00000004345	rad54b	100	84.665	ENSSPAG00000012800	rad54b	88	84.665	Stegastes_partitus
ENSOMEG00000004345	rad54b	99	59.178	ENSSSCG00000006101	-	96	59.178	Sus_scrofa
ENSOMEG00000004345	rad54b	99	62.259	ENSTGUG00000011880	-	84	62.259	Taeniopygia_guttata
ENSOMEG00000004345	rad54b	100	80.570	ENSTRUG00000010015	rad54b	82	80.570	Takifugu_rubripes
ENSOMEG00000004345	rad54b	99	55.814	ENSTTRG00000006312	-	84	55.814	Tursiops_truncatus
ENSOMEG00000004345	rad54b	99	60.516	ENSUMAG00000016401	-	84	60.516	Ursus_maritimus
ENSOMEG00000004345	rad54b	99	60.078	ENSVPAG00000003157	-	85	60.078	Vicugna_pacos
ENSOMEG00000004345	rad54b	99	53.085	ENSXETG00000025924	rad54b	96	53.411	Xenopus_tropicalis
ENSOMEG00000004345	rad54b	99	83.508	ENSXMAG00000013141	rad54b	89	83.508	Xiphophorus_maculatus