EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000004401 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 2585 bases
Position: chrNVQA01000016.1:26785623-26788207
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000024023	RVT_1	PF00078.27	3.8e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000010757	-	2585	-	ENSOMEP00000024023	830 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000004401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000004401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000004401	-	100	99.639	ENSOMEG00000009925	-	83	99.639
ENSOMEG00000004401	-	97	99.752	ENSOMEG00000023603	-	81	99.752
ENSOMEG00000004401	-	100	99.759	ENSOMEG00000020747	-	83	99.759
ENSOMEG00000004401	-	68	31.481	ENSOMEG00000002451	-	76	31.029
ENSOMEG00000004401	-	95	31.687	ENSOMEG00000007004	-	79	31.402
ENSOMEG00000004401	-	100	99.759	ENSOMEG00000010193	-	83	99.759
ENSOMEG00000004401	-	100	99.639	ENSOMEG00000003521	-	82	99.639
ENSOMEG00000004401	-	97	99.752	ENSOMEG00000022495	-	90	99.752
ENSOMEG00000004401	-	97	99.628	ENSOMEG00000023162	-	83	99.628
ENSOMEG00000004401	-	100	99.759	ENSOMEG00000019161	-	83	99.759
ENSOMEG00000004401	-	100	99.518	ENSOMEG00000010125	-	99	99.518
ENSOMEG00000004401	-	97	99.628	ENSOMEG00000001760	-	83	99.628
ENSOMEG00000004401	-	83	31.644	ENSOMEG00000013646	-	93	31.459
ENSOMEG00000004401	-	100	99.759	ENSOMEG00000021972	-	83	99.759
ENSOMEG00000004401	-	100	99.639	ENSOMEG00000002588	-	90	99.639
ENSOMEG00000004401	-	100	99.759	ENSOMEG00000003830	-	90	99.759
ENSOMEG00000004401	-	97	99.135	ENSOMEG00000008968	-	84	99.135
ENSOMEG00000004401	-	100	99.518	ENSOMEG00000004044	-	94	99.518
ENSOMEG00000004401	-	100	99.759	ENSOMEG00000022478	-	83	99.759
ENSOMEG00000004401	-	82	31.933	ENSOMEG00000016368	-	93	31.593
ENSOMEG00000004401	-	97	99.752	ENSOMEG00000021890	-	83	99.752
ENSOMEG00000004401	-	98	31.776	ENSOMEG00000000581	-	79	31.170
ENSOMEG00000004401	-	100	99.639	ENSOMEG00000000774	-	83	99.639
ENSOMEG00000004401	-	100	99.639	ENSOMEG00000008315	-	97	99.639
ENSOMEG00000004401	-	83	32.011	ENSOMEG00000019233	-	93	31.727
ENSOMEG00000004401	-	98	31.499	ENSOMEG00000010058	-	82	31.170
ENSOMEG00000004401	-	68	99.468	ENSOMEG00000022980	-	60	99.468
ENSOMEG00000004401	-	100	99.639	ENSOMEG00000013064	-	83	99.639
ENSOMEG00000004401	-	100	99.639	ENSOMEG00000022596	-	83	99.639
ENSOMEG00000004401	-	100	99.639	ENSOMEG00000010985	-	83	99.639
ENSOMEG00000004401	-	59	35.029	ENSOMEG00000022295	-	93	34.375
ENSOMEG00000004401	-	90	98.928	ENSOMEG00000004553	-	96	98.928
ENSOMEG00000004401	-	100	99.759	ENSOMEG00000017067	-	83	99.759
ENSOMEG00000004401	-	100	99.759	ENSOMEG00000022927	-	91	99.759
ENSOMEG00000004401	-	59	35.029	ENSOMEG00000019854	-	93	34.375
ENSOMEG00000004401	-	97	99.628	ENSOMEG00000013288	-	83	99.628
ENSOMEG00000004401	-	100	99.639	ENSOMEG00000005513	-	83	99.639

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000004401	-	67	31.122	ENSAPEG00000009254	-	96	31.453	Amphiprion_percula
ENSOMEG00000004401	-	92	77.165	ENSATEG00000011048	-	97	78.084	Anabas_testudineus
ENSOMEG00000004401	-	100	79.422	ENSATEG00000006562	-	99	79.543	Anabas_testudineus
ENSOMEG00000004401	-	57	34.511	ENSACLG00000000577	-	92	34.511	Astatotilapia_calliptera
ENSOMEG00000004401	-	81	31.367	ENSACLG00000013208	-	95	31.044	Astatotilapia_calliptera
ENSOMEG00000004401	-	83	31.433	ENSACLG00000017252	-	95	31.034	Astatotilapia_calliptera
ENSOMEG00000004401	-	100	75.692	ENSCSEG00000017238	-	97	75.692	Cynoglossus_semilaevis
ENSOMEG00000004401	-	54	82.000	ENSCSEG00000000334	-	95	82.000	Cynoglossus_semilaevis
ENSOMEG00000004401	-	74	77.147	ENSCSEG00000008847	-	96	77.023	Cynoglossus_semilaevis
ENSOMEG00000004401	-	75	77.258	ENSCSEG00000016291	-	97	77.258	Cynoglossus_semilaevis
ENSOMEG00000004401	-	57	34.490	ENSELUG00000023077	-	90	34.034	Esox_lucius
ENSOMEG00000004401	-	99	45.018	ENSLACG00000011569	-	97	45.018	Latimeria_chalumnae
ENSOMEG00000004401	-	53	38.864	ENSLOCG00000008864	-	94	38.864	Lepisosteus_oculatus
ENSOMEG00000004401	-	76	38.035	ENSLOCG00000016955	-	99	38.035	Lepisosteus_oculatus
ENSOMEG00000004401	-	54	84.000	ENSORLG00000027624	-	95	84.000	Oryzias_latipes
ENSOMEG00000004401	-	92	78.740	ENSORLG00000025758	-	97	79.659	Oryzias_latipes
ENSOMEG00000004401	-	90	79.518	ENSORLG00000028921	-	97	80.455	Oryzias_latipes
ENSOMEG00000004401	-	59	34.961	ENSORLG00000028845	-	93	34.007	Oryzias_latipes
ENSOMEG00000004401	-	92	79.265	ENSORLG00000024229	-	97	80.184	Oryzias_latipes
ENSOMEG00000004401	-	92	78.346	ENSORLG00000024673	-	97	79.265	Oryzias_latipes
ENSOMEG00000004401	-	90	79.116	ENSORLG00000028330	-	97	80.054	Oryzias_latipes
ENSOMEG00000004401	-	95	31.280	ENSORLG00000023376	-	96	30.814	Oryzias_latipes
ENSOMEG00000004401	-	90	79.250	ENSORLG00000030153	-	97	80.187	Oryzias_latipes
ENSOMEG00000004401	-	89	77.838	ENSORLG00000028786	-	97	78.784	Oryzias_latipes
ENSOMEG00000004401	-	92	78.899	ENSORLG00000028876	-	95	79.817	Oryzias_latipes
ENSOMEG00000004401	-	92	79.111	ENSORLG00000025843	-	98	80.054	Oryzias_latipes
ENSOMEG00000004401	-	54	85.333	ENSORLG00000022572	-	95	85.333	Oryzias_latipes
ENSOMEG00000004401	-	54	85.333	ENSORLG00000024322	-	95	85.333	Oryzias_latipes
ENSOMEG00000004401	-	90	78.581	ENSORLG00000026947	-	97	79.518	Oryzias_latipes
ENSOMEG00000004401	-	87	31.842	ENSORLG00000030430	-	79	31.489	Oryzias_latipes
ENSOMEG00000004401	-	85	79.320	ENSORLG00000023326	-	96	79.887	Oryzias_latipes
ENSOMEG00000004401	-	100	79.904	ENSORLG00000024563	-	97	80.746	Oryzias_latipes
ENSOMEG00000004401	-	55	35.146	ENSORLG00000015190	-	98	34.591	Oryzias_latipes
ENSOMEG00000004401	-	92	78.346	ENSORLG00020004369	-	97	79.265	Oryzias_latipes_hni
ENSOMEG00000004401	-	92	78.740	ENSORLG00020005006	-	97	79.659	Oryzias_latipes_hni
ENSOMEG00000004401	-	89	77.642	ENSORLG00020020442	-	97	78.591	Oryzias_latipes_hni
ENSOMEG00000004401	-	100	79.302	ENSORLG00020002609	-	97	80.144	Oryzias_latipes_hni
ENSOMEG00000004401	-	92	78.740	ENSORLG00020015867	-	97	79.659	Oryzias_latipes_hni
ENSOMEG00000004401	-	95	31.288	ENSORLG00020007707	-	79	30.939	Oryzias_latipes_hni
ENSOMEG00000004401	-	50	84.019	ENSORLG00015020118	-	100	84.019	Oryzias_latipes_hsok
ENSOMEG00000004401	-	92	78.899	ENSORLG00015005235	-	97	79.817	Oryzias_latipes_hsok
ENSOMEG00000004401	-	56	30.539	ENSORLG00015011564	-	98	30.539	Oryzias_latipes_hsok
ENSOMEG00000004401	-	100	79.422	ENSORLG00015008272	-	97	80.265	Oryzias_latipes_hsok
ENSOMEG00000004401	-	86	79.887	ENSORLG00015006293	-	100	80.872	Oryzias_latipes_hsok
ENSOMEG00000004401	-	54	85.556	ENSORLG00015021074	-	95	85.556	Oryzias_latipes_hsok
ENSOMEG00000004401	-	54	85.778	ENSORLG00015015659	-	95	85.778	Oryzias_latipes_hsok
ENSOMEG00000004401	-	54	85.778	ENSORLG00015010665	-	95	85.778	Oryzias_latipes_hsok
ENSOMEG00000004401	-	54	86.000	ENSORLG00015012247	-	95	86.000	Oryzias_latipes_hsok
ENSOMEG00000004401	-	89	78.919	ENSORLG00015010878	-	97	79.865	Oryzias_latipes_hsok
ENSOMEG00000004401	-	81	30.069	ENSORLG00015009448	-	91	30.069	Oryzias_latipes_hsok
ENSOMEG00000004401	-	56	31.303	ENSORLG00015014615	-	86	30.947	Oryzias_latipes_hsok
ENSOMEG00000004401	-	89	78.649	ENSORLG00015005006	-	97	79.595	Oryzias_latipes_hsok
ENSOMEG00000004401	-	100	79.182	ENSORLG00015018638	-	97	80.024	Oryzias_latipes_hsok
ENSOMEG00000004401	-	91	79.128	ENSORLG00015004990	-	97	80.053	Oryzias_latipes_hsok
ENSOMEG00000004401	-	53	32.080	ENSPKIG00000021701	-	94	32.080	Paramormyrops_kingsleyae
ENSOMEG00000004401	-	95	30.741	ENSPREG00000017352	-	79	30.409	Poecilia_reticulata
ENSOMEG00000004401	-	55	35.043	ENSSMAG00000002801	-	97	35.043	Scophthalmus_maximus