EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000004519 (Gene tree)
Gene ID: 112146872
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: uncharacterized LOC112146872
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 7354 bases
Position: chrNVQA01000010.1:5813192-5820545
Accession: 112146872
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000024092	tRNA-synt_2	PF00152.20	1.4e-30	1	1
ENSOMEP00000024091	tRNA-synt_2	PF00152.20	1.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000010550	-	5501	XM_024272916	ENSOMEP00000024091	1579 (aa)	XP_024128684	UPI000CF7E117
ENSOMET00000010545	-	5609	-	ENSOMEP00000024092	1385 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000004519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000004519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000004519	si:ch211-256m1.8	100	75.805	ENSAPOG00000007012	si:ch211-256m1.8	100	75.805	Acanthochromis_polyacanthus
ENSOMEG00000004519	si:ch211-256m1.8	100	75.490	ENSAOCG00000012258	si:ch211-256m1.8	100	75.490	Amphiprion_ocellaris
ENSOMEG00000004519	si:ch211-256m1.8	100	75.553	ENSAPEG00000002724	si:ch211-256m1.8	100	75.553	Amphiprion_percula
ENSOMEG00000004519	si:ch211-256m1.8	100	75.932	ENSATEG00000006278	si:ch211-256m1.8	100	75.932	Anabas_testudineus
ENSOMEG00000004519	si:ch211-256m1.8	100	76.597	ENSACLG00000011503	si:ch211-256m1.8	100	76.597	Astatotilapia_calliptera
ENSOMEG00000004519	si:ch211-256m1.8	100	65.547	ENSAMXG00000038245	si:ch211-256m1.8	100	65.307	Astyanax_mexicanus
ENSOMEG00000004519	si:ch211-256m1.8	100	70.986	ENSCSEG00000006255	si:ch211-256m1.8	100	70.625	Cynoglossus_semilaevis
ENSOMEG00000004519	si:ch211-256m1.8	100	75.997	ENSCVAG00000003376	si:ch211-256m1.8	100	75.997	Cyprinodon_variegatus
ENSOMEG00000004519	si:ch211-256m1.8	100	64.723	ENSDARG00000055172	si:ch211-256m1.8	100	64.141	Danio_rerio
ENSOMEG00000004519	si:ch211-256m1.8	100	68.447	ENSELUG00000010546	si:ch211-256m1.8	100	68.043	Esox_lucius
ENSOMEG00000004519	si:ch211-256m1.8	100	74.351	ENSFHEG00000005847	si:ch211-256m1.8	100	74.351	Fundulus_heteroclitus
ENSOMEG00000004519	si:ch211-256m1.8	100	76.567	ENSGAFG00000010269	si:ch211-256m1.8	100	76.567	Gambusia_affinis
ENSOMEG00000004519	si:ch211-256m1.8	100	76.787	ENSHBUG00000014407	si:ch211-256m1.8	100	76.787	Haplochromis_burtoni
ENSOMEG00000004519	si:ch211-256m1.8	100	71.305	ENSHCOG00000006884	si:ch211-256m1.8	100	71.492	Hippocampus_comes
ENSOMEG00000004519	si:ch211-256m1.8	100	64.373	ENSIPUG00000022659	si:ch211-256m1.8	100	63.648	Ictalurus_punctatus
ENSOMEG00000004519	si:ch211-256m1.8	100	78.339	ENSKMAG00000016377	si:ch211-256m1.8	100	78.214	Kryptolebias_marmoratus
ENSOMEG00000004519	si:ch211-256m1.8	100	75.553	ENSLBEG00000010639	si:ch211-256m1.8	100	75.553	Labrus_bergylta
ENSOMEG00000004519	si:ch211-256m1.8	99	61.461	ENSLOCG00000011127	si:ch211-256m1.8	100	59.925	Lepisosteus_oculatus
ENSOMEG00000004519	si:ch211-256m1.8	100	74.892	ENSMAMG00000005651	si:ch211-256m1.8	99	74.509	Mastacembelus_armatus
ENSOMEG00000004519	si:ch211-256m1.8	100	76.597	ENSMZEG00005006924	si:ch211-256m1.8	100	76.597	Maylandia_zebra
ENSOMEG00000004519	si:ch211-256m1.8	100	71.511	ENSMMOG00000001736	si:ch211-256m1.8	100	71.185	Mola_mola
ENSOMEG00000004519	si:ch211-256m1.8	100	76.640	ENSNBRG00000005143	si:ch211-256m1.8	100	76.534	Neolamprologus_brichardi
ENSOMEG00000004519	si:ch211-256m1.8	100	91.076	ENSORLG00000022248	si:ch211-256m1.8	100	91.076	Oryzias_latipes
ENSOMEG00000004519	si:ch211-256m1.8	100	90.823	ENSORLG00020000214	si:ch211-256m1.8	100	90.823	Oryzias_latipes_hni
ENSOMEG00000004519	si:ch211-256m1.8	100	90.690	ENSORLG00015020297	si:ch211-256m1.8	100	90.690	Oryzias_latipes_hsok
ENSOMEG00000004519	si:ch211-256m1.8	95	67.050	ENSPKIG00000007399	si:ch211-256m1.8	99	67.050	Paramormyrops_kingsleyae
ENSOMEG00000004519	si:ch211-256m1.8	99	66.981	ENSPMGG00000007698	si:ch211-256m1.8	100	63.975	Periophthalmus_magnuspinnatus
ENSOMEG00000004519	si:ch211-256m1.8	100	76.251	ENSPFOG00000005178	si:ch211-256m1.8	100	76.251	Poecilia_formosa
ENSOMEG00000004519	si:ch211-256m1.8	100	76.314	ENSPLAG00000006872	si:ch211-256m1.8	100	76.314	Poecilia_latipinna
ENSOMEG00000004519	si:ch211-256m1.8	100	76.314	ENSPMEG00000021815	si:ch211-256m1.8	100	76.314	Poecilia_mexicana
ENSOMEG00000004519	si:ch211-256m1.8	100	76.251	ENSPREG00000018669	si:ch211-256m1.8	100	76.251	Poecilia_reticulata
ENSOMEG00000004519	si:ch211-256m1.8	100	76.597	ENSPNYG00000018038	si:ch211-256m1.8	100	76.597	Pundamilia_nyererei
ENSOMEG00000004519	si:ch211-256m1.8	99	64.968	ENSPNAG00000018965	-	99	64.695	Pygocentrus_nattereri
ENSOMEG00000004519	si:ch211-256m1.8	99	66.045	ENSPNAG00000003552	si:ch211-256m1.8	99	65.639	Pygocentrus_nattereri
ENSOMEG00000004519	si:ch211-256m1.8	100	64.921	ENSSFOG00015008344	si:ch211-256m1.8	100	64.065	Scleropages_formosus
ENSOMEG00000004519	si:ch211-256m1.8	100	74.732	ENSSMAG00000007562	si:ch211-256m1.8	100	74.732	Scophthalmus_maximus
ENSOMEG00000004519	si:ch211-256m1.8	100	77.473	ENSSDUG00000018180	si:ch211-256m1.8	100	77.391	Seriola_dumerili
ENSOMEG00000004519	si:ch211-256m1.8	100	77.401	ENSSLDG00000020310	si:ch211-256m1.8	100	77.327	Seriola_lalandi_dorsalis
ENSOMEG00000004519	si:ch211-256m1.8	100	76.184	ENSSPAG00000013419	si:ch211-256m1.8	100	76.184	Stegastes_partitus
ENSOMEG00000004519	si:ch211-256m1.8	100	67.795	ENSTRUG00000023803	si:ch211-256m1.8	100	67.383	Takifugu_rubripes
ENSOMEG00000004519	si:ch211-256m1.8	100	76.884	ENSXCOG00000017726	si:ch211-256m1.8	100	76.884	Xiphophorus_couchianus
ENSOMEG00000004519	si:ch211-256m1.8	100	76.821	ENSXMAG00000026576	si:ch211-256m1.8	100	76.821	Xiphophorus_maculatus