EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000004704 (Gene tree)
Gene ID
112149882
Gene Symbol
rpa1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Minus strand
Length
22595 bases
Position
chrNVQA01000013.1:17131996-17154590
Accession
112149882
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000003753tRNA_anti-codonPF01336.253.5e-1111
ENSOMEP00000003762tRNA_anti-codonPF01336.251e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000010274-3156-ENSOMEP00000003762598 (aa)XP_024133632UPI000CF7E8C6
ENSOMET00000010304-1599-ENSOMEP00000003753532 (aa)--
Gene Model
Click here to download ENSOMEG00000004704's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000004704's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000004704rpa19559.545ENSOMEG00000011040RPA19959.545
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000004704rpa19983.445ENSAPOG00000011658rpa19983.306Acanthochromis_polyacanthus
ENSOMEG00000004704rpa19268.109ENSAPOG00000019409RPA19068.109Acanthochromis_polyacanthus
ENSOMEG00000004704rpa19960.196ENSAMEG00000007706RPA19960.196Ailuropoda_melanoleuca
ENSOMEG00000004704rpa19560.951ENSACIG00000012881RPA19960.951Amphilophus_citrinellus
ENSOMEG00000004704rpa19873.503ENSACIG00000007277rpa19973.503Amphilophus_citrinellus
ENSOMEG00000004704rpa110083.306ENSAOCG00000023376rpa19983.306Amphiprion_ocellaris
ENSOMEG00000004704rpa19957.298ENSAOCG00000009003RPA19957.609Amphiprion_ocellaris
ENSOMEG00000004704rpa110083.306ENSAPEG00000008634rpa19983.306Amphiprion_percula
ENSOMEG00000004704rpa19664.786ENSAPEG00000019132RPA19956.601Amphiprion_percula
ENSOMEG00000004704rpa19865.741ENSATEG00000006443RPA19958.359Anabas_testudineus
ENSOMEG00000004704rpa19580.106ENSATEG00000022024rpa19980.106Anabas_testudineus
ENSOMEG00000004704rpa19852.367ENSAPLG00000012442RPA110052.515Anas_platyrhynchos
ENSOMEG00000004704rpa19956.572ENSACAG00000014490RPA19956.954Anolis_carolinensis
ENSOMEG00000004704rpa19960.211ENSANAG00000023456RPA19862.395Aotus_nancymaae
ENSOMEG00000004704rpa19480.392ENSACLG00000006640rpa19980.392Astatotilapia_calliptera
ENSOMEG00000004704rpa19959.055ENSACLG00000005223RPA19959.055Astatotilapia_calliptera
ENSOMEG00000004704rpa19973.579ENSAMXG00000008418rpa19973.746Astyanax_mexicanus
ENSOMEG00000004704rpa19960.820ENSBTAG00000009711RPA19960.820Bos_taurus
ENSOMEG00000004704rpa17432.500WBGene00017546rpa-16732.215Caenorhabditis_elegans
ENSOMEG00000004704rpa19960.359ENSCJAG00000001848RPA19960.848Callithrix_jacchus
ENSOMEG00000004704rpa19961.075ENSCAFG00000019249RPA19961.564Canis_familiaris
ENSOMEG00000004704rpa19961.075ENSCAFG00020009847RPA19961.564Canis_lupus_dingo
ENSOMEG00000004704rpa19960.720ENSCHIG00000026308RPA19961.311Capra_hircus
ENSOMEG00000004704rpa19959.706ENSTSYG00000003482-9959.706Carlito_syrichta
ENSOMEG00000004704rpa19960.229ENSCPOG00000000035RPA19960.229Cavia_porcellus
ENSOMEG00000004704rpa19949.912ENSCCAG00000010981RPA19950.326Cebus_capucinus
ENSOMEG00000004704rpa19957.447ENSCLAG00000015045-9957.447Chinchilla_lanigera
ENSOMEG00000004704rpa19960.131ENSCLAG00000005185-9960.131Chinchilla_lanigera
ENSOMEG00000004704rpa19950.651ENSCSAG00000013833RPA19950.900Chlorocebus_sabaeus
ENSOMEG00000004704rpa17367.048ENSCHOG00000009454-9967.048Choloepus_hoffmanni
ENSOMEG00000004704rpa19660.034ENSCHOG00000013540-9960.034Choloepus_hoffmanni
ENSOMEG00000004704rpa19961.866ENSCPBG00000020377RPA19962.456Chrysemys_picta_bellii
ENSOMEG00000004704rpa19943.636ENSCING00000023482-9943.636Ciona_intestinalis
ENSOMEG00000004704rpa19960.885ENSCANG00000030911RPA19961.356Colobus_angolensis_palliatus
ENSOMEG00000004704rpa19961.175ENSCGRG00001008197Rpa19961.338Cricetulus_griseus_chok1gshd
ENSOMEG00000004704rpa18162.055ENSCGRG00000000582Rpa19962.253Cricetulus_griseus_crigri
ENSOMEG00000004704rpa19978.017ENSCSEG00000013066rpa19978.017Cynoglossus_semilaevis
ENSOMEG00000004704rpa19953.933ENSCSEG00000012726RPA19954.733Cynoglossus_semilaevis
ENSOMEG00000004704rpa19979.967ENSCVAG00000019431rpa19979.967Cyprinodon_variegatus
ENSOMEG00000004704rpa19367.488ENSCVAG00000013446-9656.610Cyprinodon_variegatus
ENSOMEG00000004704rpa19972.120ENSDARG00000003938rpa19972.120Danio_rerio
ENSOMEG00000004704rpa19961.184ENSDNOG00000017218RPA19961.184Dasypus_novemcinctus
ENSOMEG00000004704rpa19960.522ENSDORG00000006199Rpa19960.685Dipodomys_ordii
ENSOMEG00000004704rpa19941.680FBgn0010173RpA-709942.454Drosophila_melanogaster
ENSOMEG00000004704rpa18362.245ENSETEG00000017608RPA18262.245Echinops_telfairi
ENSOMEG00000004704rpa19959.578ENSEASG00005009372RPA19961.484Equus_asinus_asinus
ENSOMEG00000004704rpa19960.621ENSECAG00000023886RPA19960.784Equus_caballus
ENSOMEG00000004704rpa16966.986ENSEEUG00000002186-6866.986Erinaceus_europaeus
ENSOMEG00000004704rpa19975.868ENSELUG00000021071rpa19975.868Esox_lucius
ENSOMEG00000004704rpa18861.466ENSELUG00000006136RPA110061.466Esox_lucius
ENSOMEG00000004704rpa19959.869ENSFCAG00000006306RPA19959.869Felis_catus
ENSOMEG00000004704rpa19959.411ENSFALG00000006575RPA19959.411Ficedula_albicollis
ENSOMEG00000004704rpa19960.621ENSFDAG00000007720RPA19960.621Fukomys_damarensis
ENSOMEG00000004704rpa19979.402ENSFHEG00000003580rpa19979.402Fundulus_heteroclitus
ENSOMEG00000004704rpa19973.658ENSGMOG00000010382rpa19973.658Gadus_morhua
ENSOMEG00000004704rpa19959.704ENSGALG00000003072RPA19959.704Gallus_gallus
ENSOMEG00000004704rpa19981.636ENSGAFG00000012916rpa19981.636Gambusia_affinis
ENSOMEG00000004704rpa19956.202ENSGAFG00000020953RPA19956.250Gambusia_affinis
ENSOMEG00000004704rpa19978.333ENSGACG00000010856rpa19978.333Gasterosteus_aculeatus
ENSOMEG00000004704rpa19961.375ENSGAGG00000013611RPA19961.375Gopherus_agassizii
ENSOMEG00000004704rpa19961.231ENSGGOG00000014186RPA19961.231Gorilla_gorilla
ENSOMEG00000004704rpa19982.972ENSHBUG00000017773rpa19982.972Haplochromis_burtoni
ENSOMEG00000004704rpa19855.240ENSHBUG00000009348RPA19856.870Haplochromis_burtoni
ENSOMEG00000004704rpa19959.935ENSHGLG00000008846RPA19960.556Heterocephalus_glaber_female
ENSOMEG00000004704rpa19959.935ENSHGLG00100017755-9960.556Heterocephalus_glaber_male
ENSOMEG00000004704rpa19956.607ENSHGLG00100000799-9956.607Heterocephalus_glaber_male
ENSOMEG00000004704rpa19952.692ENSHGLG00100002005-9952.855Heterocephalus_glaber_male
ENSOMEG00000004704rpa19970.164ENSHCOG00000001401rpa19970.656Hippocampus_comes
ENSOMEG00000004704rpa19942.263ENSHCOG00000000351RPA19841.887Hippocampus_comes
ENSOMEG00000004704rpa19972.591ENSIPUG00000004400rpa19972.591Ictalurus_punctatus
ENSOMEG00000004704rpa19161.444ENSSTOG00000022475RPA19561.444Ictidomys_tridecemlineatus
ENSOMEG00000004704rpa19662.098ENSJJAG00000000876Rpa19862.098Jaculus_jaculus
ENSOMEG00000004704rpa19960.000ENSKMAG00000000234RPA19960.000Kryptolebias_marmoratus
ENSOMEG00000004704rpa19977.504ENSKMAG00000005605rpa19978.161Kryptolebias_marmoratus
ENSOMEG00000004704rpa19978.109ENSLBEG00000021604rpa19978.109Labrus_bergylta
ENSOMEG00000004704rpa19468.192ENSLBEG00000002281RPA17968.192Labrus_bergylta
ENSOMEG00000004704rpa18159.350ENSLACG00000007210RPA19959.350Latimeria_chalumnae
ENSOMEG00000004704rpa19969.486ENSLOCG00000006397rpa19969.652Lepisosteus_oculatus
ENSOMEG00000004704rpa19960.000ENSLAFG00000015354RPA19960.000Loxodonta_africana
ENSOMEG00000004704rpa18759.562ENSMFAG00000036138-9861.741Macaca_fascicularis
ENSOMEG00000004704rpa19961.084ENSMMUG00000011604-9961.386Macaca_mulatta
ENSOMEG00000004704rpa19956.436ENSMMUG00000002442-9956.436Macaca_mulatta
ENSOMEG00000004704rpa19952.128ENSMNEG00000029837-9762.144Macaca_nemestrina
ENSOMEG00000004704rpa19960.033ENSMNEG00000031632-9960.328Macaca_nemestrina
ENSOMEG00000004704rpa19658.081ENSMLEG00000038768-9858.249Mandrillus_leucophaeus
ENSOMEG00000004704rpa110081.803ENSMAMG00000017993rpa19981.803Mastacembelus_armatus
ENSOMEG00000004704rpa19967.674ENSMAMG00000020097RPA19267.277Mastacembelus_armatus
ENSOMEG00000004704rpa19959.055ENSMZEG00005024731RPA19959.055Maylandia_zebra
ENSOMEG00000004704rpa19982.304ENSMZEG00005007551rpa19982.304Maylandia_zebra
ENSOMEG00000004704rpa19958.775ENSMGAG00000005315RPA19858.775Meleagris_gallopavo
ENSOMEG00000004704rpa19661.993ENSMAUG00000010474Rpa19863.051Mesocricetus_auratus
ENSOMEG00000004704rpa19961.827ENSMICG00000012867RPA19961.827Microcebus_murinus
ENSOMEG00000004704rpa19961.576ENSMOCG00000013019Rpa19961.576Microtus_ochrogaster
ENSOMEG00000004704rpa19977.258ENSMMOG00000014292rpa19979.066Mola_mola
ENSOMEG00000004704rpa19861.889ENSMMOG00000010868RPA19861.889Mola_mola
ENSOMEG00000004704rpa19961.047ENSMODG00000010549RPA19961.047Monodelphis_domestica
ENSOMEG00000004704rpa19982.215ENSMALG00000011453rpa19982.215Monopterus_albus
ENSOMEG00000004704rpa19967.431ENSMALG00000001208RPA18667.431Monopterus_albus
ENSOMEG00000004704rpa19961.111MGP_CAROLIEiJ_G0016734Rpa19961.275Mus_caroli
ENSOMEG00000004704rpa19960.292ENSMUSG00000000751Rpa19960.292Mus_musculus
ENSOMEG00000004704rpa19961.463MGP_PahariEiJ_G0017871Rpa19961.626Mus_pahari
ENSOMEG00000004704rpa19960.194MGP_SPRETEiJ_G0017577Rpa19960.194Mus_spretus
ENSOMEG00000004704rpa19960.229ENSMPUG00000013119RPA19960.229Mustela_putorius_furo
ENSOMEG00000004704rpa19960.227ENSMLUG00000006113RPA19960.227Myotis_lucifugus
ENSOMEG00000004704rpa19661.735ENSNGAG00000004522Rpa19461.735Nannospalax_galili
ENSOMEG00000004704rpa19859.259ENSNBRG00000009672RPA19758.194Neolamprologus_brichardi
ENSOMEG00000004704rpa19580.071ENSNBRG00000020595rpa19980.071Neolamprologus_brichardi
ENSOMEG00000004704rpa19961.165ENSNLEG00000017149RPA19961.626Nomascus_leucogenys
ENSOMEG00000004704rpa19654.068ENSMEUG00000006714RPA19754.068Notamacropus_eugenii
ENSOMEG00000004704rpa19660.702ENSODEG00000009038RPA19660.702Octodon_degus
ENSOMEG00000004704rpa19980.524ENSONIG00000013135rpa19980.524Oreochromis_niloticus
ENSOMEG00000004704rpa19861.360ENSOANG00000010880RPA19961.526Ornithorhynchus_anatinus
ENSOMEG00000004704rpa19958.125ENSOCUG00000001504RPA19958.125Oryctolagus_cuniculus
ENSOMEG00000004704rpa19860.776ENSORLG00000003368RPA19957.077Oryzias_latipes
ENSOMEG00000004704rpa110090.651ENSORLG00000004856rpa110090.651Oryzias_latipes
ENSOMEG00000004704rpa19862.415ENSORLG00020015284RPA19954.381Oryzias_latipes_hni
ENSOMEG00000004704rpa110091.152ENSORLG00020008980rpa110091.152Oryzias_latipes_hni
ENSOMEG00000004704rpa17565.586ENSORLG00015005867-9864.545Oryzias_latipes_hsok
ENSOMEG00000004704rpa110091.152ENSORLG00015013982rpa110091.152Oryzias_latipes_hsok
ENSOMEG00000004704rpa19859.914ENSORLG00015020383RPA19956.786Oryzias_latipes_hsok
ENSOMEG00000004704rpa19961.011ENSOGAG00000005581-9961.011Otolemur_garnettii
ENSOMEG00000004704rpa17667.033ENSOGAG00000029379-9967.033Otolemur_garnettii
ENSOMEG00000004704rpa19960.720ENSOARG00000014479RPA19961.311Ovis_aries
ENSOMEG00000004704rpa19961.264ENSPPAG00000039680RPA19961.726Pan_paniscus
ENSOMEG00000004704rpa19959.869ENSPPRG00000011807RPA19959.869Panthera_pardus
ENSOMEG00000004704rpa19959.869ENSPTIG00000007898RPA19959.869Panthera_tigris_altaica
ENSOMEG00000004704rpa19961.426ENSPTRG00000008539RPA19961.889Pan_troglodytes
ENSOMEG00000004704rpa19961.075ENSPANG00000024592RPA19961.375Papio_anubis
ENSOMEG00000004704rpa19973.013ENSPKIG00000008053rpa19873.102Paramormyrops_kingsleyae
ENSOMEG00000004704rpa19662.267ENSPSIG00000015617RPA19862.267Pelodiscus_sinensis
ENSOMEG00000004704rpa19975.418ENSPMGG00000011589rpa19975.418Periophthalmus_magnuspinnatus
ENSOMEG00000004704rpa19959.802ENSPMGG00000000543RPA19962.007Periophthalmus_magnuspinnatus
ENSOMEG00000004704rpa19962.562ENSPEMG00000021061Rpa19962.562Peromyscus_maniculatus_bairdii
ENSOMEG00000004704rpa19961.564ENSPCIG00000019049RPA19961.601Phascolarctos_cinereus
ENSOMEG00000004704rpa19981.636ENSPFOG00000003987rpa19981.636Poecilia_formosa
ENSOMEG00000004704rpa19457.605ENSPLAG00000008844-9657.605Poecilia_latipinna
ENSOMEG00000004704rpa19981.302ENSPLAG00000004984rpa19981.302Poecilia_latipinna
ENSOMEG00000004704rpa19981.803ENSPMEG00000020602rpa19981.803Poecilia_mexicana
ENSOMEG00000004704rpa19556.958ENSPMEG00000003627-9757.166Poecilia_mexicana
ENSOMEG00000004704rpa19468.879ENSPREG00000010119RPA19170.197Poecilia_reticulata
ENSOMEG00000004704rpa19374.552ENSPREG00000010174rpa19574.419Poecilia_reticulata
ENSOMEG00000004704rpa110061.626ENSPCOG00000001799RPA19961.626Propithecus_coquereli
ENSOMEG00000004704rpa110060.163ENSPVAG00000002149RPA19960.163Pteropus_vampyrus
ENSOMEG00000004704rpa19958.898ENSPNYG00000024165RPA19958.898Pundamilia_nyererei
ENSOMEG00000004704rpa19982.638ENSPNYG00000016316rpa19982.638Pundamilia_nyererei
ENSOMEG00000004704rpa19966.892ENSPNAG00000008599rpa19668.126Pygocentrus_nattereri
ENSOMEG00000004704rpa19962.623ENSRNOG00000003123Rpa19962.787Rattus_norvegicus
ENSOMEG00000004704rpa19961.047ENSRBIG00000036587RPA19961.047Rhinopithecus_bieti
ENSOMEG00000004704rpa19956.465ENSRROG00000043278RPA19956.465Rhinopithecus_roxellana
ENSOMEG00000004704rpa19632.220YAR007CRFA19532.220Saccharomyces_cerevisiae
ENSOMEG00000004704rpa19161.676ENSSBOG00000030233RPA19762.210Saimiri_boliviensis_boliviensis
ENSOMEG00000004704rpa19960.492ENSSHAG00000007969RPA19861.047Sarcophilus_harrisii
ENSOMEG00000004704rpa19976.500ENSSFOG00015005362rpa19276.500Scleropages_formosus
ENSOMEG00000004704rpa19563.431ENSSMAG00000019746RPA19955.136Scophthalmus_maximus
ENSOMEG00000004704rpa19983.278ENSSDUG00000011949rpa19983.278Seriola_dumerili
ENSOMEG00000004704rpa19269.606ENSSDUG00000016358RPA18269.336Seriola_dumerili
ENSOMEG00000004704rpa19269.142ENSSLDG00000020784RPA18668.879Seriola_lalandi_dorsalis
ENSOMEG00000004704rpa19983.612ENSSLDG00000011806rpa19983.612Seriola_lalandi_dorsalis
ENSOMEG00000004704rpa19848.000ENSSARG00000007506RPA19948.000Sorex_araneus
ENSOMEG00000004704rpa19660.647ENSSPUG00000007223RPA19860.647Sphenodon_punctatus
ENSOMEG00000004704rpa19982.107ENSSPAG00000009903rpa19982.107Stegastes_partitus
ENSOMEG00000004704rpa19962.437ENSSPAG00000011165RPA19862.437Stegastes_partitus
ENSOMEG00000004704rpa19960.601ENSSSCG00000017822RPA19960.601Sus_scrofa
ENSOMEG00000004704rpa19959.442ENSTGUG00000005775RPA19959.442Taeniopygia_guttata
ENSOMEG00000004704rpa110077.963ENSTRUG00000003616rpa19977.963Takifugu_rubripes
ENSOMEG00000004704rpa19367.681ENSTRUG00000000405RPA18265.284Takifugu_rubripes
ENSOMEG00000004704rpa110078.069ENSTNIG00000016199rpa19978.325Tetraodon_nigroviridis
ENSOMEG00000004704rpa17762.727ENSTBEG00000002709RPA17366.515Tupaia_belangeri
ENSOMEG00000004704rpa19960.458ENSTTRG00000001169RPA19960.820Tursiops_truncatus
ENSOMEG00000004704rpa19375.000ENSUAMG00000015676RPA19675.000Ursus_americanus
ENSOMEG00000004704rpa19960.458ENSUMAG00000009328RPA19960.848Ursus_maritimus
ENSOMEG00000004704rpa19959.211ENSVPAG00000009443RPA19959.211Vicugna_pacos
ENSOMEG00000004704rpa19960.621ENSVVUG00000021715RPA19961.111Vulpes_vulpes
ENSOMEG00000004704rpa19961.526ENSXETG00000013538rpa19964.238Xenopus_tropicalis
ENSOMEG00000004704rpa19560.140ENSXCOG00000009899-9960.140Xiphophorus_couchianus
ENSOMEG00000004704rpa19381.541ENSXCOG00000010068rpa19481.541Xiphophorus_couchianus
ENSOMEG00000004704rpa19980.769ENSXMAG00000004102rpa19980.769Xiphophorus_maculatus
ENSOMEG00000004704rpa19268.650ENSXMAG00000010333RPA18868.650Xiphophorus_maculatus

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