EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000004710 (Gene tree)
Gene ID: 112157925
Gene Symbol: rnaseh1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 2424 bases
Position: chrNVQA01000023.1:5558-7981
Accession: ZDB-GENE-040718-407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000003783	RNase_H	PF00075.24	5.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000010249	-	1634	-	ENSOMEP00000003783	262 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000004710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000004710's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000004710	rnaseh1	90	54.321	ENSG00000171865	RNASEH1	81	54.321	Homo_sapiens
ENSOMEG00000004710	rnaseh1	99	72.285	ENSAPOG00000000412	rnaseh1	89	72.285	Acanthochromis_polyacanthus
ENSOMEG00000004710	rnaseh1	90	54.508	ENSAMEG00000018433	RNASEH1	81	54.508	Ailuropoda_melanoleuca
ENSOMEG00000004710	rnaseh1	99	75.094	ENSACIG00000014666	rnaseh1	88	75.472	Amphilophus_citrinellus
ENSOMEG00000004710	rnaseh1	99	74.157	ENSAOCG00000015210	rnaseh1	89	74.157	Amphiprion_ocellaris
ENSOMEG00000004710	rnaseh1	99	74.157	ENSAPEG00000014104	rnaseh1	89	74.157	Amphiprion_percula
ENSOMEG00000004710	rnaseh1	99	73.408	ENSATEG00000000598	rnaseh1	87	75.203	Anabas_testudineus
ENSOMEG00000004710	rnaseh1	85	50.207	ENSAPLG00000001961	RNASEH1	91	50.207	Anas_platyrhynchos
ENSOMEG00000004710	rnaseh1	92	47.464	ENSACAG00000016857	rnaseh1	85	47.464	Anolis_carolinensis
ENSOMEG00000004710	rnaseh1	90	53.750	ENSANAG00000024055	RNASEH1	81	53.750	Aotus_nancymaae
ENSOMEG00000004710	rnaseh1	99	70.956	ENSACLG00000006741	rnaseh1	88	71.691	Astatotilapia_calliptera
ENSOMEG00000004710	rnaseh1	91	55.918	ENSAMXG00000042940	rnaseh1	90	55.918	Astyanax_mexicanus
ENSOMEG00000004710	rnaseh1	90	56.612	ENSBTAG00000016235	RNASEH1	83	56.612	Bos_taurus
ENSOMEG00000004710	rnaseh1	90	33.755	WBGene00004382	rnh-1.0	87	33.755	Caenorhabditis_elegans
ENSOMEG00000004710	rnaseh1	90	52.632	ENSCJAG00000035450	RNASEH1	82	52.632	Callithrix_jacchus
ENSOMEG00000004710	rnaseh1	98	52.060	ENSCAFG00000003259	RNASEH1	91	51.493	Canis_familiaris
ENSOMEG00000004710	rnaseh1	90	57.025	ENSCHIG00000022264	-	81	57.025	Capra_hircus
ENSOMEG00000004710	rnaseh1	81	42.009	ENSCHIG00000022230	-	88	42.009	Capra_hircus
ENSOMEG00000004710	rnaseh1	90	54.545	ENSTSYG00000012926	RNASEH1	81	54.545	Carlito_syrichta
ENSOMEG00000004710	rnaseh1	83	54.545	ENSCAPG00000004813	RNASEH1	88	54.545	Cavia_aperea
ENSOMEG00000004710	rnaseh1	98	52.326	ENSCPOG00000022278	Rnaseh1	86	52.326	Cavia_porcellus
ENSOMEG00000004710	rnaseh1	90	53.629	ENSCCAG00000038017	RNASEH1	82	53.629	Cebus_capucinus
ENSOMEG00000004710	rnaseh1	90	48.305	ENSCATG00000016818	-	81	48.305	Cercocebus_atys
ENSOMEG00000004710	rnaseh1	90	53.975	ENSCATG00000016515	-	81	53.975	Cercocebus_atys
ENSOMEG00000004710	rnaseh1	90	55.319	ENSCLAG00000002440	RNASEH1	81	55.319	Chinchilla_lanigera
ENSOMEG00000004710	rnaseh1	90	53.086	ENSCSAG00000006943	RNASEH1	81	53.086	Chlorocebus_sabaeus
ENSOMEG00000004710	rnaseh1	90	54.508	ENSCPBG00000021620	RNASEH1	90	54.508	Chrysemys_picta_bellii
ENSOMEG00000004710	rnaseh1	98	37.011	ENSCING00000014054	-	90	37.011	Ciona_intestinalis
ENSOMEG00000004710	rnaseh1	83	36.325	ENSCSAVG00000000009	-	96	36.325	Ciona_savignyi
ENSOMEG00000004710	rnaseh1	90	54.167	ENSCANG00000037763	RNASEH1	81	54.167	Colobus_angolensis_palliatus
ENSOMEG00000004710	rnaseh1	98	49.813	ENSCGRG00001008950	Rnaseh1	89	50.929	Cricetulus_griseus_chok1gshd
ENSOMEG00000004710	rnaseh1	98	49.813	ENSCGRG00000006029	Rnaseh1	89	50.929	Cricetulus_griseus_crigri
ENSOMEG00000004710	rnaseh1	99	63.736	ENSCSEG00000005741	rnaseh1	87	66.534	Cynoglossus_semilaevis
ENSOMEG00000004710	rnaseh1	99	71.375	ENSCVAG00000018717	rnaseh1	89	71.375	Cyprinodon_variegatus
ENSOMEG00000004710	rnaseh1	91	63.563	ENSDARG00000042571	rnaseh1	99	63.598	Danio_rerio
ENSOMEG00000004710	rnaseh1	90	54.661	ENSDNOG00000016056	RNASEH1	81	54.661	Dasypus_novemcinctus
ENSOMEG00000004710	rnaseh1	98	51.880	ENSDORG00000000704	Rnaseh1	89	51.880	Dipodomys_ordii
ENSOMEG00000004710	rnaseh1	89	38.258	FBgn0023171	rnh1	84	38.258	Drosophila_melanogaster
ENSOMEG00000004710	rnaseh1	90	50.847	ENSETEG00000012674	RNASEH1	81	50.847	Echinops_telfairi
ENSOMEG00000004710	rnaseh1	89	47.170	ENSEBUG00000008898	rnaseh1	90	47.170	Eptatretus_burgeri
ENSOMEG00000004710	rnaseh1	89	45.238	ENSEBUG00000006116	rnaseh1	70	45.238	Eptatretus_burgeri
ENSOMEG00000004710	rnaseh1	98	52.471	ENSEASG00005022200	RNASEH1	89	52.471	Equus_asinus_asinus
ENSOMEG00000004710	rnaseh1	98	52.471	ENSECAG00000020695	RNASEH1	89	52.471	Equus_caballus
ENSOMEG00000004710	rnaseh1	99	66.790	ENSELUG00000010112	rnaseh1	91	66.790	Esox_lucius
ENSOMEG00000004710	rnaseh1	98	50.936	ENSFCAG00000025832	RNASEH1	91	50.936	Felis_catus
ENSOMEG00000004710	rnaseh1	90	50.575	ENSFALG00000002069	RNASEH1	87	50.182	Ficedula_albicollis
ENSOMEG00000004710	rnaseh1	99	50.190	ENSFDAG00000002035	RNASEH1	80	50.190	Fukomys_damarensis
ENSOMEG00000004710	rnaseh1	99	67.170	ENSGMOG00000013818	rnaseh1	90	67.170	Gadus_morhua
ENSOMEG00000004710	rnaseh1	97	51.103	ENSGALG00000016389	RNASEH1	89	51.103	Gallus_gallus
ENSOMEG00000004710	rnaseh1	99	68.889	ENSGAFG00000001776	rnaseh1	91	68.889	Gambusia_affinis
ENSOMEG00000004710	rnaseh1	99	70.301	ENSGACG00000011935	rnaseh1	90	70.301	Gasterosteus_aculeatus
ENSOMEG00000004710	rnaseh1	90	55.918	ENSGAGG00000009150	RNASEH1	56	55.918	Gopherus_agassizii
ENSOMEG00000004710	rnaseh1	90	54.237	ENSGGOG00000034822	RNASEH1	81	54.237	Gorilla_gorilla
ENSOMEG00000004710	rnaseh1	99	70.588	ENSHBUG00000004666	rnaseh1	88	70.909	Haplochromis_burtoni
ENSOMEG00000004710	rnaseh1	99	50.190	ENSHGLG00000002585	Rnaseh1	83	50.190	Heterocephalus_glaber_female
ENSOMEG00000004710	rnaseh1	99	50.190	ENSHGLG00100005105	Rnaseh1	83	50.190	Heterocephalus_glaber_male
ENSOMEG00000004710	rnaseh1	99	68.478	ENSHCOG00000012329	rnaseh1	90	69.203	Hippocampus_comes
ENSOMEG00000004710	rnaseh1	99	58.712	ENSIPUG00000023060	rnaseh1	88	61.250	Ictalurus_punctatus
ENSOMEG00000004710	rnaseh1	90	55.556	ENSSTOG00000012774	RNASEH1	83	55.556	Ictidomys_tridecemlineatus
ENSOMEG00000004710	rnaseh1	89	56.780	ENSJJAG00000020238	Rnaseh1	90	56.780	Jaculus_jaculus
ENSOMEG00000004710	rnaseh1	87	45.957	ENSJJAG00000008994	-	80	45.957	Jaculus_jaculus
ENSOMEG00000004710	rnaseh1	90	52.321	ENSJJAG00000021481	-	80	52.321	Jaculus_jaculus
ENSOMEG00000004710	rnaseh1	95	73.228	ENSKMAG00000001373	rnaseh1	85	73.228	Kryptolebias_marmoratus
ENSOMEG00000004710	rnaseh1	99	71.103	ENSLBEG00000004480	rnaseh1	88	75.620	Labrus_bergylta
ENSOMEG00000004710	rnaseh1	92	54.510	ENSLACG00000007100	RNASEH1	82	54.902	Latimeria_chalumnae
ENSOMEG00000004710	rnaseh1	92	59.761	ENSLOCG00000017212	rnaseh1	90	59.761	Lepisosteus_oculatus
ENSOMEG00000004710	rnaseh1	90	53.909	ENSLAFG00000015091	RNASEH1	81	53.909	Loxodonta_africana
ENSOMEG00000004710	rnaseh1	90	54.167	ENSMFAG00000000063	-	81	54.167	Macaca_fascicularis
ENSOMEG00000004710	rnaseh1	99	48.077	ENSMFAG00000002323	-	89	48.077	Macaca_fascicularis
ENSOMEG00000004710	rnaseh1	99	47.308	ENSMMUG00000019280	-	89	47.308	Macaca_mulatta
ENSOMEG00000004710	rnaseh1	90	53.750	ENSMNEG00000040183	-	81	53.750	Macaca_nemestrina
ENSOMEG00000004710	rnaseh1	99	47.692	ENSMNEG00000029676	-	89	47.692	Macaca_nemestrina
ENSOMEG00000004710	rnaseh1	83	53.363	ENSMLEG00000039352	-	89	53.363	Mandrillus_leucophaeus
ENSOMEG00000004710	rnaseh1	99	48.462	ENSMLEG00000028662	-	89	48.462	Mandrillus_leucophaeus
ENSOMEG00000004710	rnaseh1	99	72.491	ENSMAMG00000019725	rnaseh1	87	74.597	Mastacembelus_armatus
ENSOMEG00000004710	rnaseh1	99	70.956	ENSMZEG00005013006	rnaseh1	88	71.691	Maylandia_zebra
ENSOMEG00000004710	rnaseh1	79	50.885	ENSMGAG00000013979	RNASEH1	89	50.885	Meleagris_gallopavo
ENSOMEG00000004710	rnaseh1	99	51.103	ENSMAUG00000014957	Rnaseh1	91	51.103	Mesocricetus_auratus
ENSOMEG00000004710	rnaseh1	90	54.321	ENSMICG00000033156	RNASEH1	80	54.321	Microcebus_murinus
ENSOMEG00000004710	rnaseh1	99	51.648	ENSMOCG00000015522	Rnaseh1	91	51.648	Microtus_ochrogaster
ENSOMEG00000004710	rnaseh1	100	72.453	ENSMMOG00000015902	rnaseh1	90	72.453	Mola_mola
ENSOMEG00000004710	rnaseh1	82	48.611	ENSMODG00000028814	-	87	49.541	Monodelphis_domestica
ENSOMEG00000004710	rnaseh1	90	51.779	ENSMODG00000014491	-	80	51.779	Monodelphis_domestica
ENSOMEG00000004710	rnaseh1	99	72.285	ENSMALG00000010565	rnaseh1	89	72.285	Monopterus_albus
ENSOMEG00000004710	rnaseh1	98	52.045	MGP_CAROLIEiJ_G0017660	Rnaseh1	89	52.045	Mus_caroli
ENSOMEG00000004710	rnaseh1	98	52.416	ENSMUSG00000020630	Rnaseh1	89	52.416	Mus_musculus
ENSOMEG00000004710	rnaseh1	98	51.311	MGP_PahariEiJ_G0029418	Rnaseh1	89	52.045	Mus_pahari
ENSOMEG00000004710	rnaseh1	97	52.632	MGP_SPRETEiJ_G0018502	Rnaseh1	89	52.632	Mus_spretus
ENSOMEG00000004710	rnaseh1	58	58.824	ENSMPUG00000012984	RNASEH1	74	58.824	Mustela_putorius_furo
ENSOMEG00000004710	rnaseh1	90	56.275	ENSNGAG00000015966	Rnaseh1	77	56.275	Nannospalax_galili
ENSOMEG00000004710	rnaseh1	99	71.324	ENSNBRG00000008739	rnaseh1	88	72.059	Neolamprologus_brichardi
ENSOMEG00000004710	rnaseh1	90	50.628	ENSNLEG00000000059	-	88	50.628	Nomascus_leucogenys
ENSOMEG00000004710	rnaseh1	73	55.500	ENSNLEG00000015400	RNASEH1	78	55.500	Nomascus_leucogenys
ENSOMEG00000004710	rnaseh1	72	43.523	ENSMEUG00000003610	-	65	43.523	Notamacropus_eugenii
ENSOMEG00000004710	rnaseh1	90	52.966	ENSOPRG00000005072	RNASEH1	81	52.966	Ochotona_princeps
ENSOMEG00000004710	rnaseh1	96	52.734	ENSODEG00000000235	Rnaseh1	85	52.734	Octodon_degus
ENSOMEG00000004710	rnaseh1	92	73.705	ENSONIG00000018697	rnaseh1	90	73.705	Oreochromis_niloticus
ENSOMEG00000004710	rnaseh1	90	54.959	ENSOCUG00000006117	RNASEH1	81	54.959	Oryctolagus_cuniculus
ENSOMEG00000004710	rnaseh1	92	85.950	ENSORLG00000018127	rnaseh1	88	85.950	Oryzias_latipes
ENSOMEG00000004710	rnaseh1	99	85.606	ENSORLG00020013660	rnaseh1	89	85.606	Oryzias_latipes_hni
ENSOMEG00000004710	rnaseh1	99	85.227	ENSORLG00015011338	rnaseh1	89	85.227	Oryzias_latipes_hsok
ENSOMEG00000004710	rnaseh1	99	52.985	ENSOGAG00000017176	RNASEH1	91	52.985	Otolemur_garnettii
ENSOMEG00000004710	rnaseh1	84	54.425	ENSOARG00000005386	RNASEH1	74	54.425	Ovis_aries
ENSOMEG00000004710	rnaseh1	90	54.321	ENSPPAG00000034221	RNASEH1	81	54.321	Pan_paniscus
ENSOMEG00000004710	rnaseh1	98	50.936	ENSPPRG00000015513	RNASEH1	91	50.936	Panthera_pardus
ENSOMEG00000004710	rnaseh1	83	54.955	ENSPTIG00000019034	RNASEH1	75	54.955	Panthera_tigris_altaica
ENSOMEG00000004710	rnaseh1	90	54.321	ENSPTRG00000011614	RNASEH1	81	54.321	Pan_troglodytes
ENSOMEG00000004710	rnaseh1	99	48.496	ENSPTRG00000043403	-	96	48.496	Pan_troglodytes
ENSOMEG00000004710	rnaseh1	90	53.750	ENSPANG00000000443	RNASEH1	88	53.571	Papio_anubis
ENSOMEG00000004710	rnaseh1	84	53.846	ENSPANG00000018246	-	79	53.846	Papio_anubis
ENSOMEG00000004710	rnaseh1	92	58.566	ENSPKIG00000003146	rnaseh1	90	58.566	Paramormyrops_kingsleyae
ENSOMEG00000004710	rnaseh1	90	51.020	ENSPSIG00000002937	RNASEH1	90	51.020	Pelodiscus_sinensis
ENSOMEG00000004710	rnaseh1	99	63.359	ENSPMGG00000017463	rnaseh1	91	63.359	Periophthalmus_magnuspinnatus
ENSOMEG00000004710	rnaseh1	98	50.193	ENSPEMG00000022465	-	91	51.136	Peromyscus_maniculatus_bairdii
ENSOMEG00000004710	rnaseh1	90	54.008	ENSPCIG00000023334	-	80	54.008	Phascolarctos_cinereus
ENSOMEG00000004710	rnaseh1	99	69.517	ENSPFOG00000002841	rnaseh1	91	69.517	Poecilia_formosa
ENSOMEG00000004710	rnaseh1	92	56.000	ENSPLAG00000021349	-	95	56.000	Poecilia_latipinna
ENSOMEG00000004710	rnaseh1	99	70.000	ENSPMEG00000016826	rnaseh1	91	70.000	Poecilia_mexicana
ENSOMEG00000004710	rnaseh1	99	66.423	ENSPREG00000012197	rnaseh1	91	66.423	Poecilia_reticulata
ENSOMEG00000004710	rnaseh1	90	43.210	ENSPPYG00000025873	RNASEH1	79	43.210	Pongo_abelii
ENSOMEG00000004710	rnaseh1	90	50.410	ENSPPYG00000008067	-	90	50.410	Pongo_abelii
ENSOMEG00000004710	rnaseh1	90	50.781	ENSPCAG00000002500	RNASEH1	81	50.781	Procavia_capensis
ENSOMEG00000004710	rnaseh1	90	46.502	ENSPCOG00000019444	RNASEH1	80	46.502	Propithecus_coquereli
ENSOMEG00000004710	rnaseh1	90	51.271	ENSPVAG00000002070	RNASEH1	81	51.271	Pteropus_vampyrus
ENSOMEG00000004710	rnaseh1	99	70.588	ENSPNYG00000001292	rnaseh1	88	71.324	Pundamilia_nyererei
ENSOMEG00000004710	rnaseh1	99	58.974	ENSPNAG00000022344	rnaseh1	90	58.974	Pygocentrus_nattereri
ENSOMEG00000004710	rnaseh1	98	51.894	ENSRNOG00000008584	Rnaseh1	89	52.632	Rattus_norvegicus
ENSOMEG00000004710	rnaseh1	90	53.750	ENSRBIG00000034222	RNASEH1	81	53.750	Rhinopithecus_bieti
ENSOMEG00000004710	rnaseh1	90	53.750	ENSRROG00000041761	RNASEH1	81	53.750	Rhinopithecus_roxellana
ENSOMEG00000004710	rnaseh1	65	50.000	YMR234W	-	66	34.066	Saccharomyces_cerevisiae
ENSOMEG00000004710	rnaseh1	90	53.226	ENSSBOG00000025411	RNASEH1	82	53.226	Saimiri_boliviensis_boliviensis
ENSOMEG00000004710	rnaseh1	90	54.202	ENSSHAG00000013051	RNASEH1	79	54.202	Sarcophilus_harrisii
ENSOMEG00000004710	rnaseh1	99	57.634	ENSSFOG00015002709	rnaseh1	90	58.015	Scleropages_formosus
ENSOMEG00000004710	rnaseh1	99	72.119	ENSSMAG00000007586	rnaseh1	88	72.119	Scophthalmus_maximus
ENSOMEG00000004710	rnaseh1	97	72.201	ENSSDUG00000008217	rnaseh1	87	73.577	Seriola_dumerili
ENSOMEG00000004710	rnaseh1	85	73.009	ENSSLDG00000000442	rnaseh1	85	72.889	Seriola_lalandi_dorsalis
ENSOMEG00000004710	rnaseh1	90	50.201	ENSSPUG00000006644	RNASEH1	84	50.201	Sphenodon_punctatus
ENSOMEG00000004710	rnaseh1	99	73.408	ENSSPAG00000009353	rnaseh1	88	73.408	Stegastes_partitus
ENSOMEG00000004710	rnaseh1	90	53.086	ENSSSCG00000025305	RNASEH1	91	50.186	Sus_scrofa
ENSOMEG00000004710	rnaseh1	97	49.822	ENSTGUG00000012980	RNASEH1	89	49.275	Taeniopygia_guttata
ENSOMEG00000004710	rnaseh1	98	68.821	ENSTRUG00000015774	rnaseh1	89	70.040	Takifugu_rubripes
ENSOMEG00000004710	rnaseh1	92	73.770	ENSTNIG00000010715	rnaseh1	88	73.770	Tetraodon_nigroviridis
ENSOMEG00000004710	rnaseh1	90	52.653	ENSTTRG00000001615	RNASEH1	81	52.653	Tursiops_truncatus
ENSOMEG00000004710	rnaseh1	76	55.288	ENSUMAG00000003941	RNASEH1	65	55.288	Ursus_maritimus
ENSOMEG00000004710	rnaseh1	82	54.626	ENSVPAG00000011589	RNASEH1	76	54.626	Vicugna_pacos
ENSOMEG00000004710	rnaseh1	98	51.493	ENSVVUG00000008633	RNASEH1	81	51.493	Vulpes_vulpes
ENSOMEG00000004710	rnaseh1	89	57.438	ENSXETG00000001212	rnaseh1	82	57.438	Xenopus_tropicalis
ENSOMEG00000004710	rnaseh1	89	40.517	ENSXETG00000030371	-	87	40.517	Xenopus_tropicalis
ENSOMEG00000004710	rnaseh1	99	68.773	ENSXMAG00000002357	rnaseh1	91	68.773	Xiphophorus_maculatus