EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000004830 (Gene tree)
Gene ID: 112149255
Gene Symbol: tsr1
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 9203 bases
Position: chrNVQA01000013.1:16681090-16690292
Accession: 112149255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000003881	AARP2CN	PF08142.12	3.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000010081	-	3369	-	ENSOMEP00000003881	833 (aa)	XP_024132626	UPI000CF7C3C8

Gene Model

Click here to download ENSOMEG00000004830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000004830's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000004830	tsr1	99	54.874	ENSG00000167721	TSR1	99	54.380	Homo_sapiens
ENSOMEG00000004830	tsr1	99	84.468	ENSAPOG00000020891	tsr1	100	84.946	Acanthochromis_polyacanthus
ENSOMEG00000004830	tsr1	99	54.436	ENSAMEG00000007599	TSR1	99	53.653	Ailuropoda_melanoleuca
ENSOMEG00000004830	tsr1	99	82.812	ENSACIG00000007090	tsr1	100	82.494	Amphilophus_citrinellus
ENSOMEG00000004830	tsr1	99	84.754	ENSAOCG00000023284	tsr1	100	85.234	Amphiprion_ocellaris
ENSOMEG00000004830	tsr1	93	84.794	ENSAPEG00000008452	tsr1	100	84.794	Amphiprion_percula
ENSOMEG00000004830	tsr1	99	84.349	ENSATEG00000021961	tsr1	100	83.990	Anabas_testudineus
ENSOMEG00000004830	tsr1	91	59.530	ENSAPLG00000013422	TSR1	100	59.322	Anas_platyrhynchos
ENSOMEG00000004830	tsr1	71	49.333	ENSACAG00000000859	TSR1	92	47.855	Anolis_carolinensis
ENSOMEG00000004830	tsr1	97	55.474	ENSANAG00000031071	TSR1	99	54.678	Aotus_nancymaae
ENSOMEG00000004830	tsr1	100	86.074	ENSACLG00000007595	tsr1	100	85.834	Astatotilapia_calliptera
ENSOMEG00000004830	tsr1	50	71.838	ENSAMXG00000008470	tsr1	89	71.838	Astyanax_mexicanus
ENSOMEG00000004830	tsr1	98	55.181	ENSBTAG00000004225	TSR1	99	54.502	Bos_taurus
ENSOMEG00000004830	tsr1	97	54.745	ENSCJAG00000012456	TSR1	99	53.949	Callithrix_jacchus
ENSOMEG00000004830	tsr1	89	52.463	ENSCAFG00000019273	-	100	55.831	Canis_familiaris
ENSOMEG00000004830	tsr1	99	54.765	ENSCAFG00000002106	-	99	54.251	Canis_familiaris
ENSOMEG00000004830	tsr1	99	54.644	ENSCAFG00020009728	TSR1	99	54.132	Canis_lupus_dingo
ENSOMEG00000004830	tsr1	99	55.435	ENSCHIG00000023935	TSR1	99	54.633	Capra_hircus
ENSOMEG00000004830	tsr1	99	55.609	ENSTSYG00000005468	TSR1	99	55.127	Carlito_syrichta
ENSOMEG00000004830	tsr1	92	55.013	ENSCPOG00000014833	TSR1	99	55.199	Cavia_porcellus
ENSOMEG00000004830	tsr1	92	54.075	ENSCCAG00000028962	TSR1	98	53.230	Cebus_capucinus
ENSOMEG00000004830	tsr1	97	55.732	ENSCATG00000044262	TSR1	98	54.756	Cercocebus_atys
ENSOMEG00000004830	tsr1	99	55.596	ENSCLAG00000005567	TSR1	99	55.048	Chinchilla_lanigera
ENSOMEG00000004830	tsr1	97	55.854	ENSCSAG00000013788	TSR1	98	54.878	Chlorocebus_sabaeus
ENSOMEG00000004830	tsr1	98	57.143	ENSCPBG00000020363	TSR1	98	56.213	Chrysemys_picta_bellii
ENSOMEG00000004830	tsr1	96	45.466	ENSCING00000020658	-	99	44.608	Ciona_intestinalis
ENSOMEG00000004830	tsr1	95	44.348	ENSCSAVG00000001875	-	100	43.881	Ciona_savignyi
ENSOMEG00000004830	tsr1	97	56.410	ENSCANG00000033056	TSR1	94	70.169	Colobus_angolensis_palliatus
ENSOMEG00000004830	tsr1	99	54.633	ENSCGRG00001023942	Tsr1	99	53.571	Cricetulus_griseus_chok1gshd
ENSOMEG00000004830	tsr1	99	51.741	ENSCGRG00000013015	Tsr1	99	50.000	Cricetulus_griseus_crigri
ENSOMEG00000004830	tsr1	99	77.885	ENSCSEG00000013009	tsr1	100	78.726	Cynoglossus_semilaevis
ENSOMEG00000004830	tsr1	99	82.572	ENSCVAG00000000506	tsr1	100	82.692	Cyprinodon_variegatus
ENSOMEG00000004830	tsr1	99	72.335	ENSDARG00000007744	tsr1	100	73.428	Danio_rerio
ENSOMEG00000004830	tsr1	99	57.023	ENSDNOG00000004715	TSR1	99	57.947	Dasypus_novemcinctus
ENSOMEG00000004830	tsr1	95	48.747	ENSDORG00000023234	-	99	48.315	Dipodomys_ordii
ENSOMEG00000004830	tsr1	99	55.193	ENSDORG00000016371	-	99	54.513	Dipodomys_ordii
ENSOMEG00000004830	tsr1	96	45.421	FBgn0037073	Tsr1	96	44.472	Drosophila_melanogaster
ENSOMEG00000004830	tsr1	86	68.852	ENSETEG00000017534	TSR1	88	67.541	Echinops_telfairi
ENSOMEG00000004830	tsr1	95	52.750	ENSEBUG00000013731	TSR1	98	51.375	Eptatretus_burgeri
ENSOMEG00000004830	tsr1	99	55.409	ENSEASG00005009302	TSR1	97	55.048	Equus_asinus_asinus
ENSOMEG00000004830	tsr1	99	56.145	ENSECAG00000009114	TSR1	99	54.940	Equus_caballus
ENSOMEG00000004830	tsr1	100	73.389	ENSELUG00000020984	tsr1	96	73.389	Esox_lucius
ENSOMEG00000004830	tsr1	99	55.381	ENSFCAG00000006313	TSR1	99	54.699	Felis_catus
ENSOMEG00000004830	tsr1	99	58.977	ENSFALG00000006532	TSR1	99	58.333	Ficedula_albicollis
ENSOMEG00000004830	tsr1	99	55.783	ENSFDAG00000006038	TSR1	99	54.897	Fukomys_damarensis
ENSOMEG00000004830	tsr1	100	81.146	ENSFHEG00000003626	tsr1	100	82.100	Fundulus_heteroclitus
ENSOMEG00000004830	tsr1	99	73.206	ENSGMOG00000010336	tsr1	100	71.770	Gadus_morhua
ENSOMEG00000004830	tsr1	100	82.676	ENSGAFG00000012993	tsr1	100	82.915	Gambusia_affinis
ENSOMEG00000004830	tsr1	99	80.191	ENSGACG00000010843	tsr1	100	80.191	Gasterosteus_aculeatus
ENSOMEG00000004830	tsr1	98	56.295	ENSGAGG00000025619	-	99	55.409	Gopherus_agassizii
ENSOMEG00000004830	tsr1	99	55.235	ENSGGOG00000001704	TSR1	99	54.501	Gorilla_gorilla
ENSOMEG00000004830	tsr1	100	86.091	ENSHBUG00000017904	tsr1	100	85.851	Haplochromis_burtoni
ENSOMEG00000004830	tsr1	96	49.189	ENSHGLG00000015688	-	98	48.504	Heterocephalus_glaber_female
ENSOMEG00000004830	tsr1	99	55.995	ENSHGLG00000012806	-	99	55.288	Heterocephalus_glaber_female
ENSOMEG00000004830	tsr1	99	55.995	ENSHGLG00100015392	TSR1	99	55.288	Heterocephalus_glaber_male
ENSOMEG00000004830	tsr1	99	77.524	ENSHCOG00000001432	tsr1	100	77.524	Hippocampus_comes
ENSOMEG00000004830	tsr1	99	72.348	ENSIPUG00000004618	tsr1	100	73.421	Ictalurus_punctatus
ENSOMEG00000004830	tsr1	99	56.438	ENSSTOG00000011819	TSR1	99	56.077	Ictidomys_tridecemlineatus
ENSOMEG00000004830	tsr1	90	53.694	ENSJJAG00000019505	Tsr1	95	52.639	Jaculus_jaculus
ENSOMEG00000004830	tsr1	100	82.318	ENSKMAG00000005763	tsr1	100	82.915	Kryptolebias_marmoratus
ENSOMEG00000004830	tsr1	100	84.010	ENSLBEG00000021823	tsr1	100	84.248	Labrus_bergylta
ENSOMEG00000004830	tsr1	99	58.126	ENSLACG00000002197	TSR1	100	57.651	Latimeria_chalumnae
ENSOMEG00000004830	tsr1	91	81.579	ENSLOCG00000006491	TSR1	99	81.579	Lepisosteus_oculatus
ENSOMEG00000004830	tsr1	97	55.976	ENSMFAG00000021330	TSR1	98	55.000	Macaca_fascicularis
ENSOMEG00000004830	tsr1	97	55.854	ENSMMUG00000017519	TSR1	98	54.878	Macaca_mulatta
ENSOMEG00000004830	tsr1	97	55.854	ENSMNEG00000031382	TSR1	98	54.878	Macaca_nemestrina
ENSOMEG00000004830	tsr1	97	55.610	ENSMLEG00000036733	TSR1	98	54.634	Mandrillus_leucophaeus
ENSOMEG00000004830	tsr1	100	84.323	ENSMAMG00000017918	tsr1	100	84.798	Mastacembelus_armatus
ENSOMEG00000004830	tsr1	99	85.354	ENSMZEG00005007477	tsr1	100	85.354	Maylandia_zebra
ENSOMEG00000004830	tsr1	99	58.452	ENSMGAG00000005576	TSR1	100	57.261	Meleagris_gallopavo
ENSOMEG00000004830	tsr1	99	56.416	ENSMICG00000012943	TSR1	99	55.127	Microcebus_murinus
ENSOMEG00000004830	tsr1	99	53.846	ENSMOCG00000022764	Tsr1	99	53.589	Microtus_ochrogaster
ENSOMEG00000004830	tsr1	99	82.933	ENSMMOG00000014280	tsr1	100	82.692	Mola_mola
ENSOMEG00000004830	tsr1	98	56.543	ENSMODG00000010658	TSR1	99	56.130	Monodelphis_domestica
ENSOMEG00000004830	tsr1	99	83.813	ENSMALG00000011681	tsr1	100	83.933	Monopterus_albus
ENSOMEG00000004830	tsr1	99	55.529	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.966	Mus_caroli
ENSOMEG00000004830	tsr1	99	55.889	ENSMUSG00000038335	Tsr1	99	54.282	Mus_musculus
ENSOMEG00000004830	tsr1	99	56.130	MGP_PahariEiJ_G0017864	Tsr1	99	54.644	Mus_pahari
ENSOMEG00000004830	tsr1	99	56.010	MGP_SPRETEiJ_G0017570	Tsr1	99	54.403	Mus_spretus
ENSOMEG00000004830	tsr1	81	57.980	ENSMPUG00000013000	TSR1	100	57.038	Mustela_putorius_furo
ENSOMEG00000004830	tsr1	98	56.501	ENSMLUG00000003505	TSR1	99	55.489	Myotis_lucifugus
ENSOMEG00000004830	tsr1	100	85.424	ENSNBRG00000020728	tsr1	100	85.185	Neolamprologus_brichardi
ENSOMEG00000004830	tsr1	99	50.302	ENSNLEG00000017184	TSR1	95	66.765	Nomascus_leucogenys
ENSOMEG00000004830	tsr1	98	51.508	ENSMEUG00000015828	TSR1	99	51.617	Notamacropus_eugenii
ENSOMEG00000004830	tsr1	99	82.722	ENSONIG00000013131	tsr1	100	82.722	Oreochromis_niloticus
ENSOMEG00000004830	tsr1	97	56.846	ENSOCUG00000014256	TSR1	99	55.961	Oryctolagus_cuniculus
ENSOMEG00000004830	tsr1	100	93.548	ENSORLG00000004926	tsr1	100	94.026	Oryzias_latipes
ENSOMEG00000004830	tsr1	100	93.309	ENSORLG00020008792	tsr1	100	94.026	Oryzias_latipes_hni
ENSOMEG00000004830	tsr1	100	93.668	ENSORLG00015013838	tsr1	100	94.146	Oryzias_latipes_hsok
ENSOMEG00000004830	tsr1	99	54.773	ENSOGAG00000004492	TSR1	99	54.578	Otolemur_garnettii
ENSOMEG00000004830	tsr1	99	55.918	ENSOARG00000015437	TSR1	97	54.994	Ovis_aries
ENSOMEG00000004830	tsr1	99	54.874	ENSPPAG00000036355	TSR1	99	54.380	Pan_paniscus
ENSOMEG00000004830	tsr1	99	55.260	ENSPPRG00000015519	-	99	54.578	Panthera_pardus
ENSOMEG00000004830	tsr1	99	55.260	ENSPTIG00000010608	TSR1	99	54.578	Panthera_tigris_altaica
ENSOMEG00000004830	tsr1	99	54.874	ENSPTRG00000008547	TSR1	99	54.380	Pan_troglodytes
ENSOMEG00000004830	tsr1	97	53.602	ENSPANG00000024463	TSR1	98	52.869	Papio_anubis
ENSOMEG00000004830	tsr1	99	71.377	ENSPKIG00000013972	tsr1	100	71.737	Paramormyrops_kingsleyae
ENSOMEG00000004830	tsr1	84	58.310	ENSPSIG00000018258	TSR1	98	55.915	Pelodiscus_sinensis
ENSOMEG00000004830	tsr1	99	80.338	ENSPMGG00000011577	tsr1	99	78.726	Periophthalmus_magnuspinnatus
ENSOMEG00000004830	tsr1	99	53.735	ENSPEMG00000018033	Tsr1	99	53.061	Peromyscus_maniculatus_bairdii
ENSOMEG00000004830	tsr1	98	56.318	ENSPCIG00000009357	TSR1	97	55.875	Phascolarctos_cinereus
ENSOMEG00000004830	tsr1	99	81.873	ENSPFOG00000004483	TSR1	100	82.353	Poecilia_formosa
ENSOMEG00000004830	tsr1	100	82.598	ENSPLAG00000022320	tsr1	100	83.194	Poecilia_latipinna
ENSOMEG00000004830	tsr1	100	82.598	ENSPMEG00000004577	tsr1	100	83.194	Poecilia_mexicana
ENSOMEG00000004830	tsr1	97	83.436	ENSPREG00000010354	tsr1	96	83.578	Poecilia_reticulata
ENSOMEG00000004830	tsr1	99	51.138	ENSPPYG00000007792	TSR1	99	50.605	Pongo_abelii
ENSOMEG00000004830	tsr1	51	65.116	ENSPCAG00000012973	-	69	65.714	Procavia_capensis
ENSOMEG00000004830	tsr1	99	56.174	ENSPCOG00000017928	TSR1	99	54.722	Propithecus_coquereli
ENSOMEG00000004830	tsr1	99	55.435	ENSPVAG00000002162	TSR1	99	53.911	Pteropus_vampyrus
ENSOMEG00000004830	tsr1	100	86.315	ENSPNYG00000016163	tsr1	100	86.074	Pundamilia_nyererei
ENSOMEG00000004830	tsr1	99	73.603	ENSPNAG00000008659	tsr1	100	73.603	Pygocentrus_nattereri
ENSOMEG00000004830	tsr1	99	54.994	ENSRNOG00000002980	Tsr1	99	53.550	Rattus_norvegicus
ENSOMEG00000004830	tsr1	97	56.341	ENSRBIG00000040016	TSR1	98	54.800	Rhinopithecus_bieti
ENSOMEG00000004830	tsr1	97	56.098	ENSRROG00000030361	TSR1	98	54.557	Rhinopithecus_roxellana
ENSOMEG00000004830	tsr1	97	55.474	ENSSBOG00000020785	TSR1	99	54.800	Saimiri_boliviensis_boliviensis
ENSOMEG00000004830	tsr1	98	56.197	ENSSHAG00000011394	TSR1	99	56.355	Sarcophilus_harrisii
ENSOMEG00000004830	tsr1	99	73.735	ENSSFOG00015005455	tsr1	100	73.735	Scleropages_formosus
ENSOMEG00000004830	tsr1	99	82.156	ENSSMAG00000009504	tsr1	100	82.395	Scophthalmus_maximus
ENSOMEG00000004830	tsr1	100	84.524	ENSSDUG00000012074	tsr1	100	84.881	Seriola_dumerili
ENSOMEG00000004830	tsr1	100	84.487	ENSSLDG00000002031	tsr1	100	84.248	Seriola_lalandi_dorsalis
ENSOMEG00000004830	tsr1	92	56.800	ENSSARG00000000759	TSR1	93	56.627	Sorex_araneus
ENSOMEG00000004830	tsr1	99	57.245	ENSSPUG00000007042	TSR1	99	56.940	Sphenodon_punctatus
ENSOMEG00000004830	tsr1	99	84.827	ENSSPAG00000021951	tsr1	100	84.827	Stegastes_partitus
ENSOMEG00000004830	tsr1	98	55.596	ENSSSCG00000038534	TSR1	99	55.449	Sus_scrofa
ENSOMEG00000004830	tsr1	89	61.119	ENSTGUG00000005883	TSR1	100	59.631	Taeniopygia_guttata
ENSOMEG00000004830	tsr1	99	79.952	ENSTRUG00000004665	tsr1	100	80.889	Takifugu_rubripes
ENSOMEG00000004830	tsr1	99	80.727	ENSTNIG00000016196	tsr1	100	80.820	Tetraodon_nigroviridis
ENSOMEG00000004830	tsr1	66	72.308	ENSTBEG00000015275	-	66	72.308	Tupaia_belangeri
ENSOMEG00000004830	tsr1	99	55.676	ENSTTRG00000001177	TSR1	99	55.529	Tursiops_truncatus
ENSOMEG00000004830	tsr1	99	54.885	ENSUAMG00000025160	TSR1	99	54.096	Ursus_americanus
ENSOMEG00000004830	tsr1	95	54.670	ENSUMAG00000009294	TSR1	98	53.674	Ursus_maritimus
ENSOMEG00000004830	tsr1	83	49.211	ENSVPAG00000000228	TSR1	99	48.649	Vicugna_pacos
ENSOMEG00000004830	tsr1	99	54.885	ENSVVUG00000021767	TSR1	99	54.371	Vulpes_vulpes
ENSOMEG00000004830	tsr1	99	52.544	ENSXETG00000023797	tsr1	100	53.121	Xenopus_tropicalis
ENSOMEG00000004830	tsr1	99	81.370	ENSXCOG00000009635	tsr1	100	80.958	Xiphophorus_couchianus
ENSOMEG00000004830	tsr1	100	82.416	ENSXMAG00000001397	tsr1	97	82.057	Xiphophorus_maculatus