EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000004861 (Gene tree)
Gene ID: 112145125
Gene Symbol: rpusd4
Alias: -
Full Name: mitochondrial RNA pseudouridine synthase rpusd4-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 5269 bases
Position: chrNVQA01000009.1:5013277-5018545
Accession: 112145125
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000024307	PseudoU_synth_2	PF00849.22	2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000010007	-	1306	XM_024270180	ENSOMEP00000024307	403 (aa)	XP_024125948	UPI000CF80307

Gene Model

Click here to download ENSOMEG00000004861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000004861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000004861	rpusd4	82	50.742	ENSG00000165526	RPUSD4	89	50.292	Homo_sapiens
ENSOMEG00000004861	rpusd4	96	71.318	ENSAPOG00000011024	rpusd4	97	71.318	Acanthochromis_polyacanthus
ENSOMEG00000004861	rpusd4	78	53.145	ENSAMEG00000000127	-	83	53.145	Ailuropoda_melanoleuca
ENSOMEG00000004861	rpusd4	52	60.870	ENSAMEG00000005953	-	88	60.870	Ailuropoda_melanoleuca
ENSOMEG00000004861	rpusd4	81	70.154	ENSACIG00000003533	rpusd4	95	70.370	Amphilophus_citrinellus
ENSOMEG00000004861	rpusd4	96	70.390	ENSAOCG00000015409	rpusd4	96	70.390	Amphiprion_ocellaris
ENSOMEG00000004861	rpusd4	96	70.390	ENSAPEG00000018935	rpusd4	96	70.390	Amphiprion_percula
ENSOMEG00000004861	rpusd4	97	69.821	ENSATEG00000008059	rpusd4	97	69.821	Anabas_testudineus
ENSOMEG00000004861	rpusd4	69	50.890	ENSAPLG00000013250	RPUSD4	96	51.064	Anas_platyrhynchos
ENSOMEG00000004861	rpusd4	85	49.857	ENSACAG00000000189	RPUSD4	93	49.857	Anolis_carolinensis
ENSOMEG00000004861	rpusd4	83	50.000	ENSANAG00000024050	RPUSD4	89	50.000	Aotus_nancymaae
ENSOMEG00000004861	rpusd4	88	72.521	ENSACLG00000020996	rpusd4	91	72.521	Astatotilapia_calliptera
ENSOMEG00000004861	rpusd4	84	57.514	ENSAMXG00000031479	rpusd4	92	60.123	Astyanax_mexicanus
ENSOMEG00000004861	rpusd4	79	52.778	ENSBTAG00000020900	RPUSD4	84	52.778	Bos_taurus
ENSOMEG00000004861	rpusd4	83	48.968	ENSCJAG00000042850	RPUSD4	84	48.968	Callithrix_jacchus
ENSOMEG00000004861	rpusd4	82	52.537	ENSCAFG00000010488	RPUSD4	86	52.537	Canis_familiaris
ENSOMEG00000004861	rpusd4	82	52.537	ENSCAFG00020010621	RPUSD4	86	52.537	Canis_lupus_dingo
ENSOMEG00000004861	rpusd4	79	52.160	ENSCHIG00000009975	RPUSD4	84	52.160	Capra_hircus
ENSOMEG00000004861	rpusd4	83	51.786	ENSTSYG00000008456	RPUSD4	88	51.786	Carlito_syrichta
ENSOMEG00000004861	rpusd4	64	51.362	ENSCAPG00000006040	RPUSD4	97	51.362	Cavia_aperea
ENSOMEG00000004861	rpusd4	84	53.079	ENSCPOG00000014971	RPUSD4	89	53.079	Cavia_porcellus
ENSOMEG00000004861	rpusd4	82	49.702	ENSCCAG00000027838	RPUSD4	89	49.702	Cebus_capucinus
ENSOMEG00000004861	rpusd4	82	49.258	ENSCATG00000041570	RPUSD4	88	49.258	Cercocebus_atys
ENSOMEG00000004861	rpusd4	88	51.397	ENSCLAG00000016553	RPUSD4	92	51.397	Chinchilla_lanigera
ENSOMEG00000004861	rpusd4	82	49.555	ENSCSAG00000002274	RPUSD4	88	49.555	Chlorocebus_sabaeus
ENSOMEG00000004861	rpusd4	71	50.865	ENSCHOG00000010249	RPUSD4	100	50.865	Choloepus_hoffmanni
ENSOMEG00000004861	rpusd4	71	54.671	ENSCPBG00000011175	RPUSD4	99	54.671	Chrysemys_picta_bellii
ENSOMEG00000004861	rpusd4	83	36.919	ENSCSAVG00000000872	-	66	36.919	Ciona_savignyi
ENSOMEG00000004861	rpusd4	82	49.555	ENSCANG00000039684	RPUSD4	88	49.555	Colobus_angolensis_palliatus
ENSOMEG00000004861	rpusd4	86	50.430	ENSCGRG00001024141	Rpusd4	91	50.430	Cricetulus_griseus_chok1gshd
ENSOMEG00000004861	rpusd4	86	50.430	ENSCGRG00000014415	Rpusd4	91	50.430	Cricetulus_griseus_crigri
ENSOMEG00000004861	rpusd4	84	73.824	ENSCVAG00000008761	rpusd4	93	71.823	Cyprinodon_variegatus
ENSOMEG00000004861	rpusd4	85	72.543	ENSCVAG00000000392	rpusd4	98	72.543	Cyprinodon_variegatus
ENSOMEG00000004861	rpusd4	86	55.460	ENSDARG00000012674	rpusd4	94	55.460	Danio_rerio
ENSOMEG00000004861	rpusd4	82	50.898	ENSDNOG00000020026	RPUSD4	88	50.898	Dasypus_novemcinctus
ENSOMEG00000004861	rpusd4	72	53.425	ENSDORG00000016717	Rpusd4	86	50.152	Dipodomys_ordii
ENSOMEG00000004861	rpusd4	83	51.335	ENSETEG00000013953	RPUSD4	89	51.335	Echinops_telfairi
ENSOMEG00000004861	rpusd4	79	52.941	ENSEASG00005022982	RPUSD4	84	52.941	Equus_asinus_asinus
ENSOMEG00000004861	rpusd4	79	53.251	ENSECAG00000000557	RPUSD4	84	53.251	Equus_caballus
ENSOMEG00000004861	rpusd4	62	56.322	ENSEEUG00000014036	RPUSD4	66	56.322	Erinaceus_europaeus
ENSOMEG00000004861	rpusd4	87	59.504	ENSELUG00000008075	rpusd4	94	59.504	Esox_lucius
ENSOMEG00000004861	rpusd4	72	56.507	ENSFCAG00000029789	RPUSD4	84	53.251	Felis_catus
ENSOMEG00000004861	rpusd4	80	48.318	ENSFALG00000005171	RPUSD4	96	48.318	Ficedula_albicollis
ENSOMEG00000004861	rpusd4	84	50.877	ENSFDAG00000014307	RPUSD4	90	50.877	Fukomys_damarensis
ENSOMEG00000004861	rpusd4	88	72.067	ENSFHEG00000004329	rpusd4	93	72.067	Fundulus_heteroclitus
ENSOMEG00000004861	rpusd4	79	63.323	ENSGMOG00000017726	rpusd4	98	62.310	Gadus_morhua
ENSOMEG00000004861	rpusd4	70	52.982	ENSGALG00000024326	RPUSD4	89	49.843	Gallus_gallus
ENSOMEG00000004861	rpusd4	88	68.320	ENSGAFG00000021559	rpusd4	93	68.320	Gambusia_affinis
ENSOMEG00000004861	rpusd4	83	72.239	ENSGACG00000001657	rpusd4	98	75.445	Gasterosteus_aculeatus
ENSOMEG00000004861	rpusd4	80	50.926	ENSGAGG00000000132	RPUSD4	89	50.926	Gopherus_agassizii
ENSOMEG00000004861	rpusd4	82	50.445	ENSGGOG00000016494	RPUSD4	89	50.000	Gorilla_gorilla
ENSOMEG00000004861	rpusd4	94	68.586	ENSHBUG00000022838	rpusd4	98	68.586	Haplochromis_burtoni
ENSOMEG00000004861	rpusd4	82	51.190	ENSHGLG00000002285	RPUSD4	88	51.190	Heterocephalus_glaber_female
ENSOMEG00000004861	rpusd4	82	51.190	ENSHGLG00100006385	RPUSD4	88	51.190	Heterocephalus_glaber_male
ENSOMEG00000004861	rpusd4	87	69.429	ENSHCOG00000006612	rpusd4	90	69.429	Hippocampus_comes
ENSOMEG00000004861	rpusd4	94	51.697	ENSIPUG00000023879	rusd4	97	51.697	Ictalurus_punctatus
ENSOMEG00000004861	rpusd4	79	52.795	ENSSTOG00000025280	RPUSD4	87	52.795	Ictidomys_tridecemlineatus
ENSOMEG00000004861	rpusd4	84	51.613	ENSJJAG00000018673	Rpusd4	89	51.613	Jaculus_jaculus
ENSOMEG00000004861	rpusd4	87	70.986	ENSKMAG00000021805	rpusd4	92	70.986	Kryptolebias_marmoratus
ENSOMEG00000004861	rpusd4	82	74.018	ENSLBEG00000020394	rpusd4	93	74.018	Labrus_bergylta
ENSOMEG00000004861	rpusd4	80	56.347	ENSLACG00000011028	RPUSD4	89	53.371	Latimeria_chalumnae
ENSOMEG00000004861	rpusd4	86	44.759	ENSLOCG00000003124	rpusd4	93	44.759	Lepisosteus_oculatus
ENSOMEG00000004861	rpusd4	84	51.170	ENSLAFG00000005211	RPUSD4	99	45.205	Loxodonta_africana
ENSOMEG00000004861	rpusd4	82	49.555	ENSMFAG00000039513	RPUSD4	88	49.555	Macaca_fascicularis
ENSOMEG00000004861	rpusd4	82	48.961	ENSMMUG00000007933	RPUSD4	88	48.961	Macaca_mulatta
ENSOMEG00000004861	rpusd4	82	49.555	ENSMNEG00000027414	RPUSD4	88	49.555	Macaca_nemestrina
ENSOMEG00000004861	rpusd4	82	49.852	ENSMLEG00000042461	RPUSD4	88	49.852	Mandrillus_leucophaeus
ENSOMEG00000004861	rpusd4	88	70.083	ENSMAMG00000023839	rpusd4	94	70.083	Mastacembelus_armatus
ENSOMEG00000004861	rpusd4	88	72.521	ENSMZEG00005011999	rpusd4	91	72.521	Maylandia_zebra
ENSOMEG00000004861	rpusd4	70	51.590	ENSMGAG00000000840	RPUSD4	99	48.624	Meleagris_gallopavo
ENSOMEG00000004861	rpusd4	84	51.163	ENSMAUG00000010280	Rpusd4	89	51.163	Mesocricetus_auratus
ENSOMEG00000004861	rpusd4	82	52.083	ENSMICG00000015979	RPUSD4	90	55.082	Microcebus_murinus
ENSOMEG00000004861	rpusd4	84	48.105	ENSMOCG00000000661	Rpusd4	89	48.105	Microtus_ochrogaster
ENSOMEG00000004861	rpusd4	80	72.897	ENSMMOG00000021731	rpusd4	94	72.897	Mola_mola
ENSOMEG00000004861	rpusd4	76	51.923	ENSMODG00000004521	RPUSD4	79	51.923	Monodelphis_domestica
ENSOMEG00000004861	rpusd4	75	75.658	ENSMALG00000005839	rpusd4	98	72.755	Monopterus_albus
ENSOMEG00000004861	rpusd4	86	48.711	MGP_CAROLIEiJ_G0031954	Rpusd4	91	48.711	Mus_caroli
ENSOMEG00000004861	rpusd4	81	51.212	ENSMUSG00000032044	Rpusd4	86	51.212	Mus_musculus
ENSOMEG00000004861	rpusd4	86	49.284	MGP_PahariEiJ_G0014819	Rpusd4	91	49.284	Mus_pahari
ENSOMEG00000004861	rpusd4	81	50.909	MGP_SPRETEiJ_G0033078	Rpusd4	86	50.909	Mus_spretus
ENSOMEG00000004861	rpusd4	83	50.733	ENSMPUG00000006608	RPUSD4	89	50.733	Mustela_putorius_furo
ENSOMEG00000004861	rpusd4	63	52.756	ENSMLUG00000029348	-	98	52.756	Myotis_lucifugus
ENSOMEG00000004861	rpusd4	74	54.967	ENSMLUG00000017328	-	79	54.967	Myotis_lucifugus
ENSOMEG00000004861	rpusd4	84	52.035	ENSNGAG00000020847	Rpusd4	89	52.199	Nannospalax_galili
ENSOMEG00000004861	rpusd4	80	73.765	ENSNBRG00000005207	rpusd4	94	73.765	Neolamprologus_brichardi
ENSOMEG00000004861	rpusd4	84	50.000	ENSNLEG00000007465	RPUSD4	89	50.000	Nomascus_leucogenys
ENSOMEG00000004861	rpusd4	82	51.940	ENSMEUG00000004370	RPUSD4	88	51.940	Notamacropus_eugenii
ENSOMEG00000004861	rpusd4	83	51.170	ENSODEG00000004577	RPUSD4	89	51.170	Octodon_degus
ENSOMEG00000004861	rpusd4	88	73.371	ENSONIG00000018879	rpusd4	90	74.699	Oreochromis_niloticus
ENSOMEG00000004861	rpusd4	72	48.822	ENSOANG00000007247	RPUSD4	93	48.822	Ornithorhynchus_anatinus
ENSOMEG00000004861	rpusd4	83	50.588	ENSOCUG00000017039	RPUSD4	81	53.548	Oryctolagus_cuniculus
ENSOMEG00000004861	rpusd4	95	80.366	ENSORLG00000002750	rpusd4	94	85.380	Oryzias_latipes
ENSOMEG00000004861	rpusd4	100	79.404	ENSORLG00020002044	rpusd4	100	80.149	Oryzias_latipes_hni
ENSOMEG00000004861	rpusd4	100	79.208	ENSORLG00015020034	rpusd4	100	79.950	Oryzias_latipes_hsok
ENSOMEG00000004861	rpusd4	80	52.568	ENSOGAG00000008922	RPUSD4	88	52.381	Otolemur_garnettii
ENSOMEG00000004861	rpusd4	79	52.160	ENSOARG00000012238	RPUSD4	84	52.160	Ovis_aries
ENSOMEG00000004861	rpusd4	82	50.742	ENSPPAG00000042883	RPUSD4	83	50.292	Pan_paniscus
ENSOMEG00000004861	rpusd4	79	52.941	ENSPPRG00000003081	RPUSD4	84	52.941	Panthera_pardus
ENSOMEG00000004861	rpusd4	79	52.941	ENSPTIG00000012059	RPUSD4	82	56.164	Panthera_tigris_altaica
ENSOMEG00000004861	rpusd4	82	50.742	ENSPTRG00000004454	RPUSD4	89	50.292	Pan_troglodytes
ENSOMEG00000004861	rpusd4	82	49.555	ENSPANG00000015040	RPUSD4	88	49.555	Papio_anubis
ENSOMEG00000004861	rpusd4	90	55.647	ENSPKIG00000023986	rpusd4	90	55.647	Paramormyrops_kingsleyae
ENSOMEG00000004861	rpusd4	72	55.479	ENSPSIG00000014268	RPUSD4	92	55.479	Pelodiscus_sinensis
ENSOMEG00000004861	rpusd4	82	67.262	ENSPMGG00000002806	rpusd4	94	66.168	Periophthalmus_magnuspinnatus
ENSOMEG00000004861	rpusd4	85	43.391	ENSPEMG00000000278	Rpusd4	90	43.391	Peromyscus_maniculatus_bairdii
ENSOMEG00000004861	rpusd4	74	41.033	ENSPMAG00000008183	rpusd4	95	41.033	Petromyzon_marinus
ENSOMEG00000004861	rpusd4	80	52.439	ENSPCIG00000010212	RPUSD4	88	52.439	Phascolarctos_cinereus
ENSOMEG00000004861	rpusd4	88	69.399	ENSPFOG00000019030	rpusd4	96	69.399	Poecilia_formosa
ENSOMEG00000004861	rpusd4	88	70.055	ENSPLAG00000016848	rpusd4	93	70.055	Poecilia_latipinna
ENSOMEG00000004861	rpusd4	88	68.956	ENSPMEG00000017534	rpusd4	93	68.956	Poecilia_mexicana
ENSOMEG00000004861	rpusd4	83	70.262	ENSPREG00000005689	rpusd4	89	70.262	Poecilia_reticulata
ENSOMEG00000004861	rpusd4	84	49.415	ENSPPYG00000004043	RPUSD4	89	49.415	Pongo_abelii
ENSOMEG00000004861	rpusd4	63	54.667	ENSPCAG00000000753	RPUSD4	69	54.667	Procavia_capensis
ENSOMEG00000004861	rpusd4	82	48.955	ENSPCOG00000020694	RPUSD4	88	48.955	Propithecus_coquereli
ENSOMEG00000004861	rpusd4	81	51.205	ENSPVAG00000000988	RPUSD4	87	51.205	Pteropus_vampyrus
ENSOMEG00000004861	rpusd4	93	68.800	ENSPNYG00000009652	rpusd4	97	68.800	Pundamilia_nyererei
ENSOMEG00000004861	rpusd4	80	61.350	ENSPNAG00000012264	rpusd4	86	61.350	Pygocentrus_nattereri
ENSOMEG00000004861	rpusd4	83	51.032	ENSRNOG00000011567	Rpusd4	88	51.032	Rattus_norvegicus
ENSOMEG00000004861	rpusd4	78	50.629	ENSRBIG00000034842	RPUSD4	88	48.961	Rhinopithecus_bieti
ENSOMEG00000004861	rpusd4	78	50.629	ENSRROG00000039753	RPUSD4	88	48.961	Rhinopithecus_roxellana
ENSOMEG00000004861	rpusd4	83	49.408	ENSSBOG00000030413	RPUSD4	89	49.408	Saimiri_boliviensis_boliviensis
ENSOMEG00000004861	rpusd4	73	53.535	ENSSHAG00000008304	RPUSD4	96	53.535	Sarcophilus_harrisii
ENSOMEG00000004861	rpusd4	80	58.788	ENSSFOG00015006203	rpusd4	89	58.788	Scleropages_formosus
ENSOMEG00000004861	rpusd4	96	65.285	ENSSMAG00000020978	rpusd4	99	65.285	Scophthalmus_maximus
ENSOMEG00000004861	rpusd4	91	69.837	ENSSDUG00000013399	rpusd4	95	69.837	Seriola_dumerili
ENSOMEG00000004861	rpusd4	91	69.565	ENSSLDG00000023507	rpusd4	95	69.565	Seriola_lalandi_dorsalis
ENSOMEG00000004861	rpusd4	73	55.068	ENSSPUG00000001401	RPUSD4	81	55.068	Sphenodon_punctatus
ENSOMEG00000004861	rpusd4	94	69.634	ENSSPAG00000012163	rpusd4	96	69.634	Stegastes_partitus
ENSOMEG00000004861	rpusd4	82	50.746	ENSSSCG00000015233	RPUSD4	88	50.746	Sus_scrofa
ENSOMEG00000004861	rpusd4	71	52.941	ENSTGUG00000000773	RPUSD4	96	52.941	Taeniopygia_guttata
ENSOMEG00000004861	rpusd4	92	65.135	ENSTRUG00000012283	rpusd4	94	65.135	Takifugu_rubripes
ENSOMEG00000004861	rpusd4	92	63.904	ENSTNIG00000014676	rpusd4	93	63.904	Tetraodon_nigroviridis
ENSOMEG00000004861	rpusd4	79	52.012	ENSTTRG00000001555	RPUSD4	85	52.012	Tursiops_truncatus
ENSOMEG00000004861	rpusd4	78	52.978	ENSUMAG00000002219	RPUSD4	83	52.978	Ursus_maritimus
ENSOMEG00000004861	rpusd4	58	48.936	ENSVPAG00000001066	RPUSD4	87	48.936	Vicugna_pacos
ENSOMEG00000004861	rpusd4	82	52.537	ENSVVUG00000020101	RPUSD4	86	52.537	Vulpes_vulpes
ENSOMEG00000004861	rpusd4	88	70.360	ENSXCOG00000004676	rpusd4	94	69.663	Xiphophorus_couchianus
ENSOMEG00000004861	rpusd4	88	70.360	ENSXMAG00000023351	rpusd4	92	70.360	Xiphophorus_maculatus