EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000004883 (Gene tree)
Gene ID: 112146738
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC112146738
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 5156 bases
Position: chrNVQA01000001.1:25581120-25586275
Accession: 112146738
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000003949	MMR_HSR1	PF01926.23	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000009971	-	2907	-	ENSOMEP00000003949	520 (aa)	XP_024128488	UPI000CF7F078

Gene Model

Click here to download ENSOMEG00000004883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000004883's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000004883	-	77	30.837	ENSOMEG00000011970	-	73	31.140
ENSOMEG00000004883	-	71	34.021	ENSOMEG00000006577	-	55	34.021
ENSOMEG00000004883	-	79	34.052	ENSOMEG00000018786	-	68	34.052
ENSOMEG00000004883	-	84	32.530	ENSOMEG00000003632	-	50	32.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000004883	-	76	30.288	ENSAPOG00000001447	-	88	30.288	Acanthochromis_polyacanthus
ENSOMEG00000004883	-	67	30.263	ENSACIG00000012718	-	89	30.263	Amphilophus_citrinellus
ENSOMEG00000004883	-	80	32.609	ENSACIG00000012648	-	73	32.609	Amphilophus_citrinellus
ENSOMEG00000004883	-	100	64.423	ENSAOCG00000004245	-	100	64.423	Amphiprion_ocellaris
ENSOMEG00000004883	-	69	33.617	ENSAOCG00000022545	-	72	33.205	Amphiprion_ocellaris
ENSOMEG00000004883	-	78	31.111	ENSATEG00000011330	-	54	31.111	Anabas_testudineus
ENSOMEG00000004883	-	75	33.036	ENSATEG00000011352	-	54	33.971	Anabas_testudineus
ENSOMEG00000004883	-	83	33.884	ENSATEG00000012058	-	61	33.884	Anabas_testudineus
ENSOMEG00000004883	-	84	31.004	ENSACLG00000024854	-	90	31.004	Astatotilapia_calliptera
ENSOMEG00000004883	-	82	32.000	ENSACLG00000005220	-	52	32.000	Astatotilapia_calliptera
ENSOMEG00000004883	-	99	65.830	ENSACLG00000012317	-	99	65.830	Astatotilapia_calliptera
ENSOMEG00000004883	-	71	32.314	ENSACLG00000024836	-	81	32.314	Astatotilapia_calliptera
ENSOMEG00000004883	-	90	33.094	ENSELUG00000005405	-	67	31.169	Esox_lucius
ENSOMEG00000004883	-	80	31.278	ENSELUG00000015135	-	55	31.278	Esox_lucius
ENSOMEG00000004883	-	55	31.356	ENSELUG00000015106	-	61	31.780	Esox_lucius
ENSOMEG00000004883	-	62	33.168	ENSFHEG00000021828	-	82	33.168	Fundulus_heteroclitus
ENSOMEG00000004883	-	94	65.580	ENSFHEG00000007909	-	98	65.580	Fundulus_heteroclitus
ENSOMEG00000004883	-	57	32.093	ENSGACG00000002627	-	72	33.673	Gasterosteus_aculeatus
ENSOMEG00000004883	-	77	31.004	ENSHBUG00000003015	-	51	31.004	Haplochromis_burtoni
ENSOMEG00000004883	-	78	34.211	ENSHBUG00000002999	-	90	34.211	Haplochromis_burtoni
ENSOMEG00000004883	-	80	30.924	ENSKMAG00000010851	-	52	30.924	Kryptolebias_marmoratus
ENSOMEG00000004883	-	53	62.366	ENSLBEG00000003708	-	99	62.366	Labrus_bergylta
ENSOMEG00000004883	-	61	32.461	ENSLBEG00000006614	-	72	32.461	Labrus_bergylta
ENSOMEG00000004883	-	82	32.609	ENSLBEG00000010625	-	76	31.154	Labrus_bergylta
ENSOMEG00000004883	-	62	30.882	ENSMAMG00000017874	-	76	30.882	Mastacembelus_armatus
ENSOMEG00000004883	-	65	31.731	ENSMAMG00000018175	-	61	31.416	Mastacembelus_armatus
ENSOMEG00000004883	-	81	35.533	ENSMAMG00000018061	-	67	35.533	Mastacembelus_armatus
ENSOMEG00000004883	-	63	68.085	ENSMZEG00005002897	-	99	68.085	Maylandia_zebra
ENSOMEG00000004883	-	74	33.649	ENSMZEG00005021732	-	77	33.649	Maylandia_zebra
ENSOMEG00000004883	-	83	31.004	ENSMZEG00005021723	-	81	31.004	Maylandia_zebra
ENSOMEG00000004883	-	76	31.559	ENSMALG00000001082	-	62	31.559	Monopterus_albus
ENSOMEG00000004883	-	79	31.285	ENSMALG00000004282	-	78	31.148	Monopterus_albus
ENSOMEG00000004883	-	78	33.772	ENSNBRG00000003060	-	69	33.906	Neolamprologus_brichardi
ENSOMEG00000004883	-	78	31.004	ENSNBRG00000014905	-	88	31.004	Neolamprologus_brichardi
ENSOMEG00000004883	-	77	35.088	ENSNBRG00000019119	-	71	35.088	Neolamprologus_brichardi
ENSOMEG00000004883	-	76	31.878	ENSONIG00000000233	-	70	31.878	Oreochromis_niloticus
ENSOMEG00000004883	-	82	31.429	ENSONIG00000011313	-	52	31.429	Oreochromis_niloticus
ENSOMEG00000004883	-	89	31.579	ENSONIG00000014210	-	96	31.579	Oreochromis_niloticus
ENSOMEG00000004883	-	63	34.615	ENSONIG00000010736	-	74	34.188	Oreochromis_niloticus
ENSOMEG00000004883	-	82	33.480	ENSONIG00000004482	-	81	33.480	Oreochromis_niloticus
ENSOMEG00000004883	-	83	35.052	ENSONIG00000013819	-	85	35.052	Oreochromis_niloticus
ENSOMEG00000004883	-	80	32.114	ENSORLG00000017091	-	51	32.114	Oryzias_latipes
ENSOMEG00000004883	-	81	32.653	ENSORLG00020016100	-	51	32.653	Oryzias_latipes_hni
ENSOMEG00000004883	-	81	30.833	ENSORLG00015006787	-	50	30.833	Oryzias_latipes_hsok
ENSOMEG00000004883	-	76	32.203	ENSPMGG00000002488	-	79	31.933	Periophthalmus_magnuspinnatus
ENSOMEG00000004883	-	79	32.589	ENSPFOG00000000259	-	85	32.589	Poecilia_formosa
ENSOMEG00000004883	-	79	31.535	ENSPREG00000018694	-	86	30.705	Poecilia_reticulata
ENSOMEG00000004883	-	75	32.857	ENSPREG00000006470	-	52	33.023	Poecilia_reticulata
ENSOMEG00000004883	-	75	33.628	ENSPNYG00000019890	-	77	33.628	Pundamilia_nyererei
ENSOMEG00000004883	-	77	31.004	ENSPNYG00000008570	-	50	31.004	Pundamilia_nyererei
ENSOMEG00000004883	-	81	32.018	ENSPNYG00000008579	-	66	32.018	Pundamilia_nyererei
ENSOMEG00000004883	-	81	33.962	ENSPNYG00000004195	-	79	32.636	Pundamilia_nyererei
ENSOMEG00000004883	-	79	32.895	ENSPNYG00000023994	-	93	32.895	Pundamilia_nyererei
ENSOMEG00000004883	-	84	31.276	ENSPNAG00000026011	-	59	31.276	Pygocentrus_nattereri
ENSOMEG00000004883	-	79	32.287	ENSPNAG00000003225	-	80	32.287	Pygocentrus_nattereri
ENSOMEG00000004883	-	68	35.385	ENSSDUG00000016459	-	74	36.224	Seriola_dumerili
ENSOMEG00000004883	-	76	33.186	ENSSDUG00000016791	-	77	33.186	Seriola_dumerili
ENSOMEG00000004883	-	79	31.278	ENSSDUG00000016809	-	74	31.278	Seriola_dumerili
ENSOMEG00000004883	-	67	32.701	ENSSDUG00000016851	-	56	32.381	Seriola_dumerili
ENSOMEG00000004883	-	74	31.056	ENSSDUG00000021006	-	91	31.056	Seriola_dumerili
ENSOMEG00000004883	-	63	32.692	ENSSDUG00000009253	-	60	32.743	Seriola_dumerili
ENSOMEG00000004883	-	65	33.182	ENSSLDG00000013126	-	84	33.061	Seriola_lalandi_dorsalis
ENSOMEG00000004883	-	80	32.068	ENSSLDG00000004473	-	91	32.099	Seriola_lalandi_dorsalis
ENSOMEG00000004883	-	79	34.848	ENSSLDG00000007022	-	75	34.848	Seriola_lalandi_dorsalis
ENSOMEG00000004883	-	70	35.841	ENSSLDG00000001533	-	77	34.211	Seriola_lalandi_dorsalis
ENSOMEG00000004883	-	76	33.186	ENSSLDG00000001606	-	87	33.186	Seriola_lalandi_dorsalis
ENSOMEG00000004883	-	78	31.466	ENSSLDG00000004233	-	96	31.466	Seriola_lalandi_dorsalis
ENSOMEG00000004883	-	63	33.032	ENSSLDG00000011692	-	97	33.032	Seriola_lalandi_dorsalis
ENSOMEG00000004883	-	78	31.064	ENSSPAG00000001365	-	93	31.064	Stegastes_partitus
ENSOMEG00000004883	-	81	31.102	ENSXCOG00000018711	-	100	31.102	Xiphophorus_couchianus
ENSOMEG00000004883	-	78	34.247	ENSXMAG00000027923	-	69	34.247	Xiphophorus_maculatus