EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000005009 (Gene tree)
Gene ID: -
Gene Symbol: mrps18c
Alias: -
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 4667 bases
Position: chrNVQA01000031.1:297427-302093
Accession: ZDB-GENE-060503-609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000004063	Ribosomal_S18	PF01084.20	7.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000009777	-	315	-	ENSOMEP00000004063	104 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000005009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000005009's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000005009	mrps18c	86	78.652	ENSAPOG00000019045	mrps18c	69	78.652	Acanthochromis_polyacanthus
ENSOMEG00000005009	mrps18c	94	70.408	ENSACIG00000020253	mrps18c	94	70.408	Amphilophus_citrinellus
ENSOMEG00000005009	mrps18c	87	77.778	ENSAOCG00000014338	mrps18c	70	77.778	Amphiprion_ocellaris
ENSOMEG00000005009	mrps18c	84	78.161	ENSAPEG00000023068	-	85	76.667	Amphiprion_percula
ENSOMEG00000005009	mrps18c	87	77.778	ENSAPEG00000022956	mrps18c	70	77.778	Amphiprion_percula
ENSOMEG00000005009	mrps18c	83	76.744	ENSATEG00000023417	mrps18c	66	76.744	Anabas_testudineus
ENSOMEG00000005009	mrps18c	84	63.218	ENSAPLG00000012544	-	84	63.218	Anas_platyrhynchos
ENSOMEG00000005009	mrps18c	94	74.490	ENSACLG00000010521	mrps18c	93	74.490	Astatotilapia_calliptera
ENSOMEG00000005009	mrps18c	86	78.652	ENSAMXG00000012238	mrps18c	90	78.652	Astyanax_mexicanus
ENSOMEG00000005009	mrps18c	87	63.333	ENSCPBG00000007783	-	55	63.333	Chrysemys_picta_bellii
ENSOMEG00000005009	mrps18c	85	75.000	ENSCSEG00000000711	mrps18c	60	78.462	Cynoglossus_semilaevis
ENSOMEG00000005009	mrps18c	85	76.136	ENSCVAG00000020169	mrps18c	69	76.136	Cyprinodon_variegatus
ENSOMEG00000005009	mrps18c	86	71.910	ENSDARG00000069624	mrps18c	65	71.910	Danio_rerio
ENSOMEG00000005009	mrps18c	100	61.739	ENSELUG00000024603	mrps18c	86	61.739	Esox_lucius
ENSOMEG00000005009	mrps18c	85	73.864	ENSFHEG00000018752	-	69	73.864	Fundulus_heteroclitus
ENSOMEG00000005009	mrps18c	85	73.864	ENSFHEG00000015550	mrps18c	65	73.864	Fundulus_heteroclitus
ENSOMEG00000005009	mrps18c	84	66.667	ENSGALG00000023191	MRPS18C	60	66.667	Gallus_gallus
ENSOMEG00000005009	mrps18c	86	73.034	ENSGAFG00000008048	mrps18c	57	73.034	Gambusia_affinis
ENSOMEG00000005009	mrps18c	86	64.045	ENSGAGG00000015144	-	63	64.045	Gopherus_agassizii
ENSOMEG00000005009	mrps18c	87	77.778	ENSHBUG00000002008	mrps18c	69	77.778	Haplochromis_burtoni
ENSOMEG00000005009	mrps18c	86	76.404	ENSHCOG00000013161	mrps18c	67	76.404	Hippocampus_comes
ENSOMEG00000005009	mrps18c	86	77.528	ENSIPUG00000003783	mrps18c	86	77.528	Ictalurus_punctatus
ENSOMEG00000005009	mrps18c	86	75.281	ENSKMAG00000016467	mrps18c	70	75.281	Kryptolebias_marmoratus
ENSOMEG00000005009	mrps18c	86	80.899	ENSLBEG00000019174	mrps18c	68	80.899	Labrus_bergylta
ENSOMEG00000005009	mrps18c	86	80.899	ENSLBEG00000021861	mrps18c	68	80.899	Labrus_bergylta
ENSOMEG00000005009	mrps18c	83	68.605	ENSLACG00000011243	mrps18c	67	68.605	Latimeria_chalumnae
ENSOMEG00000005009	mrps18c	86	70.787	ENSLOCG00000012115	mrps18c	66	70.787	Lepisosteus_oculatus
ENSOMEG00000005009	mrps18c	86	74.157	ENSMAMG00000012386	mrps18c	66	74.157	Mastacembelus_armatus
ENSOMEG00000005009	mrps18c	87	77.778	ENSMZEG00005023278	mrps18c	69	77.778	Maylandia_zebra
ENSOMEG00000005009	mrps18c	86	77.528	ENSMMOG00000011316	mrps18c	68	77.528	Mola_mola
ENSOMEG00000005009	mrps18c	87	77.778	ENSNBRG00000006182	mrps18c	69	77.778	Neolamprologus_brichardi
ENSOMEG00000005009	mrps18c	83	67.442	ENSMEUG00000010972	-	68	67.442	Notamacropus_eugenii
ENSOMEG00000005009	mrps18c	87	75.556	ENSONIG00000012527	mrps18c	89	75.556	Oreochromis_niloticus
ENSOMEG00000005009	mrps18c	86	93.258	ENSORLG00015006869	mrps18c	69	93.258	Oryzias_latipes_hsok
ENSOMEG00000005009	mrps18c	87	74.444	ENSPKIG00000021736	mrps18c	66	74.444	Paramormyrops_kingsleyae
ENSOMEG00000005009	mrps18c	89	81.720	ENSPMGG00000002991	mrps18c	94	81.720	Periophthalmus_magnuspinnatus
ENSOMEG00000005009	mrps18c	86	70.787	ENSPFOG00000002351	mrps18c	57	70.787	Poecilia_formosa
ENSOMEG00000005009	mrps18c	86	70.787	ENSPLAG00000015187	mrps18c	70	70.787	Poecilia_latipinna
ENSOMEG00000005009	mrps18c	86	70.787	ENSPMEG00000014488	mrps18c	57	70.787	Poecilia_mexicana
ENSOMEG00000005009	mrps18c	81	72.619	ENSPREG00000012593	mrps18c	86	72.619	Poecilia_reticulata
ENSOMEG00000005009	mrps18c	87	76.667	ENSPNYG00000010654	mrps18c	69	76.667	Pundamilia_nyererei
ENSOMEG00000005009	mrps18c	97	68.269	ENSPNAG00000009350	mrps18c	97	68.269	Pygocentrus_nattereri
ENSOMEG00000005009	mrps18c	86	71.910	ENSSFOG00015019444	mrps18c	65	71.910	Scleropages_formosus
ENSOMEG00000005009	mrps18c	86	74.157	ENSSDUG00000015676	mrps18c	70	74.157	Seriola_dumerili
ENSOMEG00000005009	mrps18c	86	74.157	ENSSLDG00000002034	mrps18c	69	74.157	Seriola_lalandi_dorsalis
ENSOMEG00000005009	mrps18c	81	66.667	ENSSPUG00000013990	-	61	66.667	Sphenodon_punctatus
ENSOMEG00000005009	mrps18c	91	68.367	ENSSPAG00000008687	mrps18c	76	68.367	Stegastes_partitus
ENSOMEG00000005009	mrps18c	85	76.136	ENSTRUG00000024403	mrps18c	68	76.136	Takifugu_rubripes
ENSOMEG00000005009	mrps18c	85	77.273	ENSTNIG00000005674	mrps18c	68	77.273	Tetraodon_nigroviridis
ENSOMEG00000005009	mrps18c	81	72.619	ENSXETG00000027597	mrps18c	64	72.619	Xenopus_tropicalis
ENSOMEG00000005009	mrps18c	86	73.034	ENSXCOG00000016208	mrps18c	89	73.034	Xiphophorus_couchianus
ENSOMEG00000005009	mrps18c	84	73.563	ENSXMAG00000012555	mrps18c	56	73.563	Xiphophorus_maculatus