EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000005516 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 3672 bases
Position: chrNVQA01002580.1:53-3724
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000024714	RVT_1	PF00078.27	3.7e-10	1	1
ENSOMEP00000024714	RNase_H	PF00075.24	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000008960	-	3672	-	ENSOMEP00000024714	888 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000005516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000005516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000005516	-	99	82.957	ENSOMEG00000021132	-	64	83.448

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000005516	-	81	36.327	ENSAPEG00000000438	-	80	36.059	Amphiprion_percula
ENSOMEG00000005516	-	53	40.329	ENSACLG00000005138	-	52	40.208	Astatotilapia_calliptera
ENSOMEG00000005516	-	98	33.671	ENSACLG00000003782	-	63	33.671	Astatotilapia_calliptera
ENSOMEG00000005516	-	99	33.407	ENSACLG00000023027	-	70	33.145	Astatotilapia_calliptera
ENSOMEG00000005516	-	98	37.862	ENSACLG00000014318	-	65	37.082	Astatotilapia_calliptera
ENSOMEG00000005516	-	99	33.075	ENSACLG00000006254	-	62	33.484	Astatotilapia_calliptera
ENSOMEG00000005516	-	98	38.626	ENSAMXG00000033060	-	74	38.618	Astyanax_mexicanus
ENSOMEG00000005516	-	82	36.510	ENSAMXG00000038483	-	55	35.973	Astyanax_mexicanus
ENSOMEG00000005516	-	98	59.247	ENSAMXG00000040526	-	73	59.357	Astyanax_mexicanus
ENSOMEG00000005516	-	80	34.375	ENSAMXG00000033455	-	60	34.379	Astyanax_mexicanus
ENSOMEG00000005516	-	86	35.072	ENSBTAG00000052165	-	75	34.595	Bos_taurus
ENSOMEG00000005516	-	93	45.683	ENSCPBG00000009184	-	89	45.444	Chrysemys_picta_bellii
ENSOMEG00000005516	-	86	35.742	ENSCPBG00000009921	-	96	35.714	Chrysemys_picta_bellii
ENSOMEG00000005516	-	98	34.787	ENSCSEG00000012922	-	69	34.876	Cynoglossus_semilaevis
ENSOMEG00000005516	-	98	34.787	ENSCSEG00000009059	-	69	34.876	Cynoglossus_semilaevis
ENSOMEG00000005516	-	98	34.787	ENSCSEG00000018136	-	69	34.876	Cynoglossus_semilaevis
ENSOMEG00000005516	-	98	34.787	ENSCSEG00000013867	-	69	34.876	Cynoglossus_semilaevis
ENSOMEG00000005516	-	98	34.787	ENSCSEG00000011566	-	69	34.876	Cynoglossus_semilaevis
ENSOMEG00000005516	-	98	34.871	ENSECAG00000034459	-	79	34.758	Equus_caballus
ENSOMEG00000005516	-	84	35.286	ENSGALG00000053504	-	79	35.302	Gallus_gallus
ENSOMEG00000005516	-	84	36.303	ENSGALG00000050905	-	79	36.327	Gallus_gallus
ENSOMEG00000005516	-	98	46.250	ENSLBEG00000013565	-	64	45.610	Labrus_bergylta
ENSOMEG00000005516	-	83	34.987	ENSMAMG00000010978	-	60	34.987	Mastacembelus_armatus
ENSOMEG00000005516	-	64	41.065	ENSMODG00000028504	-	64	41.065	Monodelphis_domestica
ENSOMEG00000005516	-	70	41.186	ENSMODG00000029391	-	99	40.865	Monodelphis_domestica
ENSOMEG00000005516	-	98	41.486	ENSMODG00000029722	-	78	41.257	Monodelphis_domestica
ENSOMEG00000005516	-	98	40.812	ENSMODG00000027661	-	75	40.770	Monodelphis_domestica
ENSOMEG00000005516	-	66	40.168	ENSMODG00000027664	-	77	39.832	Monodelphis_domestica
ENSOMEG00000005516	-	79	43.441	ENSMODG00000029516	-	99	43.159	Monodelphis_domestica
ENSOMEG00000005516	-	63	42.274	ENSMODG00000027448	-	69	41.918	Monodelphis_domestica
ENSOMEG00000005516	-	67	40.468	ENSMODG00000027863	-	100	40.134	Monodelphis_domestica
ENSOMEG00000005516	-	58	42.389	ENSMODG00000028783	-	91	42.004	Monodelphis_domestica
ENSOMEG00000005516	-	50	41.480	ENSMODG00000027506	-	92	41.031	Monodelphis_domestica
ENSOMEG00000005516	-	62	40.761	ENSMODG00000029436	-	98	40.399	Monodelphis_domestica
ENSOMEG00000005516	-	60	43.068	ENSMODG00000027316	-	99	42.620	Monodelphis_domestica
ENSOMEG00000005516	-	54	46.074	ENSMODG00000029647	-	59	45.648	Monodelphis_domestica
ENSOMEG00000005516	-	79	42.716	ENSMODG00000029806	-	99	42.433	Monodelphis_domestica
ENSOMEG00000005516	-	54	45.135	ENSMODG00000028686	-	63	44.681	Monodelphis_domestica
ENSOMEG00000005516	-	98	41.600	ENSMODG00000029698	-	77	41.371	Monodelphis_domestica
ENSOMEG00000005516	-	52	42.489	ENSMODG00000027623	-	99	42.117	Monodelphis_domestica
ENSOMEG00000005516	-	98	41.486	ENSMODG00000027428	-	70	41.257	Monodelphis_domestica
ENSOMEG00000005516	-	79	42.574	ENSMODG00000027329	-	99	42.291	Monodelphis_domestica
ENSOMEG00000005516	-	98	41.371	ENSMODG00000027641	-	77	41.143	Monodelphis_domestica
ENSOMEG00000005516	-	62	41.049	ENSMODG00000029071	-	98	40.687	Monodelphis_domestica
ENSOMEG00000005516	-	62	38.989	ENSMODG00000029366	-	100	38.989	Monodelphis_domestica
ENSOMEG00000005516	-	66	40.646	ENSMODG00000028692	-	80	40.306	Monodelphis_domestica
ENSOMEG00000005516	-	98	40.732	ENSMODG00000028385	-	77	40.503	Monodelphis_domestica
ENSOMEG00000005516	-	70	41.026	ENSMODG00000028221	-	99	40.705	Monodelphis_domestica
ENSOMEG00000005516	-	93	41.757	ENSMODG00000027851	-	98	41.516	Monodelphis_domestica
ENSOMEG00000005516	-	53	41.983	ENSMODG00000028077	-	99	41.614	Monodelphis_domestica
ENSOMEG00000005516	-	98	41.486	ENSMODG00000028573	-	77	41.257	Monodelphis_domestica
ENSOMEG00000005516	-	79	42.857	ENSMODG00000028191	-	99	42.574	Monodelphis_domestica
ENSOMEG00000005516	-	50	42.384	ENSMODG00000028014	-	99	42.000	Monodelphis_domestica
ENSOMEG00000005516	-	70	41.346	ENSMODG00000028121	-	99	41.026	Monodelphis_domestica
ENSOMEG00000005516	-	97	41.170	ENSMODG00000029740	-	77	40.940	Monodelphis_domestica
ENSOMEG00000005516	-	70	41.026	ENSMODG00000029294	-	99	40.705	Monodelphis_domestica
ENSOMEG00000005516	-	66	41.345	ENSMODG00000029316	-	71	41.008	Monodelphis_domestica
ENSOMEG00000005516	-	67	43.760	ENSMODG00000028815	-	95	43.428	Monodelphis_domestica
ENSOMEG00000005516	-	61	43.796	ENSMODG00000028842	-	99	43.431	Monodelphis_domestica
ENSOMEG00000005516	-	70	41.186	ENSMODG00000027524	-	99	40.865	Monodelphis_domestica
ENSOMEG00000005516	-	70	42.240	ENSONIG00000021274	-	86	41.760	Oreochromis_niloticus
ENSOMEG00000005516	-	85	34.159	ENSONIG00000021180	-	63	34.029	Oreochromis_niloticus
ENSOMEG00000005516	-	98	34.572	ENSORLG00020007796	-	57	35.023	Oryzias_latipes_hni
ENSOMEG00000005516	-	70	35.368	ENSOARG00000009849	-	50	40.512	Ovis_aries
ENSOMEG00000005516	-	72	36.667	ENSOARG00000015892	-	81	36.503	Ovis_aries
ENSOMEG00000005516	-	70	35.368	ENSOARG00000014856	-	50	40.512	Ovis_aries
ENSOMEG00000005516	-	66	34.596	ENSOARG00000000143	-	94	34.391	Ovis_aries
ENSOMEG00000005516	-	70	35.368	ENSOARG00000001648	-	65	40.512	Ovis_aries
ENSOMEG00000005516	-	61	37.410	ENSOARG00000015221	-	55	40.085	Ovis_aries
ENSOMEG00000005516	-	98	38.488	ENSPSIG00000001866	-	77	38.259	Pelodiscus_sinensis
ENSOMEG00000005516	-	98	37.935	ENSSSCG00000034853	-	75	37.738	Sus_scrofa
ENSOMEG00000005516	-	75	34.498	ENSXMAG00000024544	-	71	34.307	Xiphophorus_maculatus
ENSOMEG00000005516	-	98	35.255	ENSXMAG00000022532	-	63	35.261	Xiphophorus_maculatus