EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000005541 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: -
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 4924 bases
Position: chrNVQA01000004.1:11787527-11792450
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000004567	RRM_1	PF00076.22	5.3e-32	1	2
ENSOMEP00000004567	RRM_1	PF00076.22	5.3e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000008939	-	1053	-	ENSOMEP00000004567	350 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000005541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000005541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000005541	srsf4	50	44.865	ENSOMEG00000002601	srsf9	73	42.162
ENSOMEG00000005541	srsf4	58	41.204	ENSOMEG00000017711	-	71	45.405
ENSOMEG00000005541	srsf4	50	64.972	ENSOMEG00000000628	srsf5a	65	63.842
ENSOMEG00000005541	srsf4	51	68.362	ENSOMEG00000006001	srsf6a	68	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000005541	srsf4	88	78.056	ENSAPOG00000020244	srsf4	92	73.512	Acanthochromis_polyacanthus
ENSOMEG00000005541	srsf4	50	78.771	ENSAPOG00000023399	-	60	71.910	Acanthochromis_polyacanthus
ENSOMEG00000005541	srsf4	51	95.531	ENSACIG00000018649	srsf4	90	96.694	Amphilophus_citrinellus
ENSOMEG00000005541	srsf4	64	68.293	ENSAPEG00000020826	srsf4	81	58.730	Amphiprion_percula
ENSOMEG00000005541	srsf4	51	91.304	ENSATEG00000005680	srsf4	61	89.560	Anabas_testudineus
ENSOMEG00000005541	srsf4	51	87.151	ENSANAG00000037134	SRSF4	56	68.696	Aotus_nancymaae
ENSOMEG00000005541	srsf4	84	75.920	ENSACLG00000003395	srsf4	89	95.588	Astatotilapia_calliptera
ENSOMEG00000005541	srsf4	51	90.503	ENSAMXG00000034811	srsf4	70	91.549	Astyanax_mexicanus
ENSOMEG00000005541	srsf4	50	51.759	WBGene00004698	rsp-1	97	49.306	Caenorhabditis_elegans
ENSOMEG00000005541	srsf4	51	87.151	ENSCHIG00000022096	SRSF4	53	60.690	Capra_hircus
ENSOMEG00000005541	srsf4	80	48.797	ENSCING00000011362	-	69	44.309	Ciona_intestinalis
ENSOMEG00000005541	srsf4	51	59.278	ENSCING00000020631	-	81	58.163	Ciona_intestinalis
ENSOMEG00000005541	srsf4	95	42.978	ENSCING00000024718	-	56	54.404	Ciona_intestinalis
ENSOMEG00000005541	srsf4	50	63.636	ENSCING00000012370	-	68	60.302	Ciona_intestinalis
ENSOMEG00000005541	srsf4	50	66.667	ENSCSAVG00000002581	-	70	65.193	Ciona_savignyi
ENSOMEG00000005541	srsf4	63	95.588	ENSCSEG00000010058	srsf4	79	95.588	Cynoglossus_semilaevis
ENSOMEG00000005541	srsf4	80	60.851	ENSCVAG00000004342	srsf4	85	62.903	Cyprinodon_variegatus
ENSOMEG00000005541	srsf4	51	86.813	ENSDARG00000105293	srsf4	66	94.286	Danio_rerio
ENSOMEG00000005541	srsf4	50	61.111	ENSEBUG00000001681	srsf4	67	60.335	Eptatretus_burgeri
ENSOMEG00000005541	srsf4	51	80.928	ENSELUG00000017551	srsf4	93	73.846	Esox_lucius
ENSOMEG00000005541	srsf4	89	82.166	ENSFHEG00000007472	srsf4	88	98.780	Fundulus_heteroclitus
ENSOMEG00000005541	srsf4	51	88.764	ENSGMOG00000012906	srsf4	57	88.333	Gadus_morhua
ENSOMEG00000005541	srsf4	93	75.522	ENSGAFG00000018496	srsf4	92	95.588	Gambusia_affinis
ENSOMEG00000005541	srsf4	51	93.889	ENSGACG00000002389	srsf4	56	91.667	Gasterosteus_aculeatus
ENSOMEG00000005541	srsf4	70	98.485	ENSHCOG00000012540	srsf4	78	98.485	Hippocampus_comes
ENSOMEG00000005541	srsf4	88	77.389	ENSKMAG00000013631	srsf4	88	75.394	Kryptolebias_marmoratus
ENSOMEG00000005541	srsf4	84	81.000	ENSMAMG00000004888	srsf4	77	95.588	Mastacembelus_armatus
ENSOMEG00000005541	srsf4	84	75.920	ENSMZEG00005026275	srsf4	64	98.701	Maylandia_zebra
ENSOMEG00000005541	srsf4	84	78.930	ENSMMOG00000013653	srsf4	83	95.588	Mola_mola
ENSOMEG00000005541	srsf4	51	87.640	ENSMODG00000011052	SRSF4	56	84.444	Monodelphis_domestica
ENSOMEG00000005541	srsf4	88	81.994	ENSMALG00000013392	srsf4	83	81.818	Monopterus_albus
ENSOMEG00000005541	srsf4	51	71.508	ENSNLEG00000030787	-	62	68.927	Nomascus_leucogenys
ENSOMEG00000005541	srsf4	93	90.265	ENSORLG00015007566	srsf4	91	95.588	Oryzias_latipes_hsok
ENSOMEG00000005541	srsf4	51	86.528	ENSPMGG00000013436	srsf4	95	81.102	Periophthalmus_magnuspinnatus
ENSOMEG00000005541	srsf4	50	66.298	ENSPMAG00000009397	srsf4	68	64.835	Petromyzon_marinus
ENSOMEG00000005541	srsf4	93	71.552	ENSPFOG00000001306	srsf4	99	64.658	Poecilia_formosa
ENSOMEG00000005541	srsf4	88	84.887	ENSPLAG00000008812	srsf4	85	95.652	Poecilia_latipinna
ENSOMEG00000005541	srsf4	76	98.507	ENSPMEG00000023638	srsf4	91	95.652	Poecilia_mexicana
ENSOMEG00000005541	srsf4	72	98.507	ENSPREG00000009639	srsf4	85	95.652	Poecilia_reticulata
ENSOMEG00000005541	srsf4	51	91.758	ENSPNYG00000003796	srsf4	86	65.190	Pundamilia_nyererei
ENSOMEG00000005541	srsf4	50	92.000	ENSPNAG00000023844	srsf4	54	88.333	Pygocentrus_nattereri
ENSOMEG00000005541	srsf4	50	92.045	ENSSFOG00015020292	srsf4	72	97.403	Scleropages_formosus
ENSOMEG00000005541	srsf4	51	93.548	ENSSMAG00000001707	srsf4	51	90.811	Scophthalmus_maximus
ENSOMEG00000005541	srsf4	84	77.133	ENSSDUG00000007387	srsf4	81	71.331	Seriola_dumerili
ENSOMEG00000005541	srsf4	51	78.212	ENSSLDG00000009745	srsf4	62	76.243	Seriola_lalandi_dorsalis
ENSOMEG00000005541	srsf4	89	74.699	ENSSPAG00000014538	srsf4	90	95.588	Stegastes_partitus
ENSOMEG00000005541	srsf4	51	93.889	ENSTRUG00000011891	srsf4	91	66.269	Takifugu_rubripes
ENSOMEG00000005541	srsf4	51	95.000	ENSTNIG00000005573	srsf4	92	70.904	Tetraodon_nigroviridis
ENSOMEG00000005541	srsf4	94	75.219	ENSXCOG00000018826	srsf4	95	86.260	Xiphophorus_couchianus
ENSOMEG00000005541	srsf4	51	72.340	ENSXCOG00000003212	-	55	71.809	Xiphophorus_couchianus