EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000005677 (Gene tree)
Gene ID: 112140537
Gene Symbol: larsb
Alias: -
Full Name: leucyl-tRNA synthetase
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 24262 bases
Position: chrNVQA01000005.1:17504183-17528444
Accession: 112140537
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000004613	tRNA-synt_1g	PF09334.11	2.9e-17	1	2
ENSOMEP00000004613	tRNA-synt_1g	PF09334.11	2.9e-17	2	2
ENSOMEP00000004698	tRNA-synt_1g	PF09334.11	2.9e-17	1	2
ENSOMEP00000004698	tRNA-synt_1g	PF09334.11	2.9e-17	2	2
ENSOMEP00000024788	tRNA-synt_1g	PF09334.11	3e-17	1	2
ENSOMEP00000024788	tRNA-synt_1g	PF09334.11	3e-17	2	2
ENSOMEP00000004613	Anticodon_1	PF08264.13	2.7e-15	1	1
ENSOMEP00000004698	Anticodon_1	PF08264.13	2.7e-15	1	1
ENSOMEP00000024788	Anticodon_1	PF08264.13	2.8e-15	1	1
ENSOMEP00000004698	tRNA-synt_1	PF00133.22	9.2e-39	1	2
ENSOMEP00000004698	tRNA-synt_1	PF00133.22	9.2e-39	2	2
ENSOMEP00000024788	tRNA-synt_1	PF00133.22	9.5e-39	1	2
ENSOMEP00000024788	tRNA-synt_1	PF00133.22	9.5e-39	2	2
ENSOMEP00000004613	tRNA-synt_1	PF00133.22	1.2e-35	1	2
ENSOMEP00000004613	tRNA-synt_1	PF00133.22	1.2e-35	2	2
ENSOMEP00000004613	tRNA-synt_1e	PF01406.19	2.1e-06	1	1
ENSOMEP00000004698	tRNA-synt_1e	PF01406.19	2.2e-06	1	1
ENSOMEP00000024788	tRNA-synt_1e	PF01406.19	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000008784	-	5070	-	ENSOMEP00000024788	1184 (aa)	XP_024119304	UPI000CF82159
ENSOMET00000008729	-	5029	-	ENSOMEP00000004698	1172 (aa)	-	-
ENSOMET00000008868	-	3495	-	ENSOMEP00000004613	1164 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000005677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000005677's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000005677	larsb	100	77.787	ENSG00000133706	LARS	100	78.565	Homo_sapiens
ENSOMEG00000005677	larsb	100	93.255	ENSAPOG00000010585	larsb	100	93.750	Acanthochromis_polyacanthus
ENSOMEG00000005677	larsb	99	78.608	ENSAMEG00000017584	LARS	100	78.378	Ailuropoda_melanoleuca
ENSOMEG00000005677	larsb	100	91.231	ENSACIG00000014026	larsb	100	91.231	Amphilophus_citrinellus
ENSOMEG00000005677	larsb	100	94.003	ENSAOCG00000016931	larsb	100	94.003	Amphiprion_ocellaris
ENSOMEG00000005677	larsb	100	94.088	ENSAPEG00000017720	larsb	100	94.088	Amphiprion_percula
ENSOMEG00000005677	larsb	100	87.352	ENSATEG00000010441	larsb	99	87.352	Anabas_testudineus
ENSOMEG00000005677	larsb	96	79.430	ENSAPLG00000008145	LARS	100	79.528	Anas_platyrhynchos
ENSOMEG00000005677	larsb	100	77.280	ENSACAG00000013916	LARS	100	77.365	Anolis_carolinensis
ENSOMEG00000005677	larsb	99	71.986	ENSANAG00000014375	LARS	99	71.986	Aotus_nancymaae
ENSOMEG00000005677	larsb	100	92.568	ENSACLG00000010881	larsb	100	92.568	Astatotilapia_calliptera
ENSOMEG00000005677	larsb	100	87.679	ENSAMXG00000019979	larsb	100	87.679	Astyanax_mexicanus
ENSOMEG00000005677	larsb	100	77.872	ENSBTAG00000006765	LARS	100	77.872	Bos_taurus
ENSOMEG00000005677	larsb	99	55.076	WBGene00003073	lars-1	99	55.323	Caenorhabditis_elegans
ENSOMEG00000005677	larsb	100	77.703	ENSCJAG00000021314	LARS	100	78.565	Callithrix_jacchus
ENSOMEG00000005677	larsb	100	78.632	ENSCAFG00000006431	LARS	100	78.632	Canis_familiaris
ENSOMEG00000005677	larsb	99	78.680	ENSCAFG00020025009	LARS	99	78.680	Canis_lupus_dingo
ENSOMEG00000005677	larsb	100	78.041	ENSCHIG00000014949	LARS	100	78.041	Capra_hircus
ENSOMEG00000005677	larsb	100	77.449	ENSTSYG00000001253	LARS	100	77.449	Carlito_syrichta
ENSOMEG00000005677	larsb	96	62.489	ENSCAPG00000015676	LARS	97	62.893	Cavia_aperea
ENSOMEG00000005677	larsb	100	76.858	ENSCPOG00000012329	LARS	100	76.858	Cavia_porcellus
ENSOMEG00000005677	larsb	100	78.125	ENSCCAG00000020789	LARS	100	78.125	Cebus_capucinus
ENSOMEG00000005677	larsb	97	78.155	ENSCATG00000033463	LARS	100	78.477	Cercocebus_atys
ENSOMEG00000005677	larsb	100	77.280	ENSCLAG00000011193	LARS	100	77.280	Chinchilla_lanigera
ENSOMEG00000005677	larsb	99	78.093	ENSCSAG00000012280	LARS	97	77.882	Chlorocebus_sabaeus
ENSOMEG00000005677	larsb	90	71.542	ENSCHOG00000009309	LARS	90	71.542	Choloepus_hoffmanni
ENSOMEG00000005677	larsb	99	79.794	ENSCPBG00000008415	LARS	99	80.269	Chrysemys_picta_bellii
ENSOMEG00000005677	larsb	99	64.140	ENSCING00000008535	-	98	63.644	Ciona_intestinalis
ENSOMEG00000005677	larsb	99	63.319	ENSCSAVG00000009040	-	100	67.869	Ciona_savignyi
ENSOMEG00000005677	larsb	100	77.787	ENSCANG00000031137	LARS	100	77.787	Colobus_angolensis_palliatus
ENSOMEG00000005677	larsb	93	72.429	ENSCGRG00001004647	Lars	99	72.897	Cricetulus_griseus_chok1gshd
ENSOMEG00000005677	larsb	100	74.093	ENSCGRG00000007284	Lars	100	74.093	Cricetulus_griseus_crigri
ENSOMEG00000005677	larsb	100	91.821	ENSCSEG00000014984	larsb	100	91.821	Cynoglossus_semilaevis
ENSOMEG00000005677	larsb	100	93.666	ENSCVAG00000014685	larsb	100	93.666	Cyprinodon_variegatus
ENSOMEG00000005677	larsb	69	87.359	ENSDARG00000019280	larsb	100	87.359	Danio_rerio
ENSOMEG00000005677	larsb	96	77.531	ENSDNOG00000017963	LARS	100	77.836	Dasypus_novemcinctus
ENSOMEG00000005677	larsb	100	72.934	ENSDORG00000014913	Lars	100	72.934	Dipodomys_ordii
ENSOMEG00000005677	larsb	99	58.653	FBgn0284253	LeuRS	99	58.557	Drosophila_melanogaster
ENSOMEG00000005677	larsb	95	63.285	ENSETEG00000003145	LARS	100	63.285	Echinops_telfairi
ENSOMEG00000005677	larsb	93	60.200	ENSEBUG00000014985	larsb	97	60.200	Eptatretus_burgeri
ENSOMEG00000005677	larsb	100	78.632	ENSEASG00005020569	LARS	100	78.788	Equus_asinus_asinus
ENSOMEG00000005677	larsb	100	78.547	ENSECAG00000008963	LARS	100	79.274	Equus_caballus
ENSOMEG00000005677	larsb	92	63.070	ENSEEUG00000014854	LARS	92	63.070	Erinaceus_europaeus
ENSOMEG00000005677	larsb	100	85.642	ENSELUG00000023311	larsb	100	85.642	Esox_lucius
ENSOMEG00000005677	larsb	99	78.342	ENSFCAG00000008715	LARS	100	79.701	Felis_catus
ENSOMEG00000005677	larsb	100	78.734	ENSFALG00000003209	LARS	93	78.819	Ficedula_albicollis
ENSOMEG00000005677	larsb	100	77.111	ENSFDAG00000020764	LARS	100	77.111	Fukomys_damarensis
ENSOMEG00000005677	larsb	91	93.416	ENSFHEG00000010437	larsb	100	93.416	Fundulus_heteroclitus
ENSOMEG00000005677	larsb	99	86.156	ENSGMOG00000013645	larsb	99	85.968	Gadus_morhua
ENSOMEG00000005677	larsb	100	79.461	ENSGALG00000007494	LARS	100	79.545	Gallus_gallus
ENSOMEG00000005677	larsb	100	92.483	ENSGAFG00000005029	larsb	100	92.483	Gambusia_affinis
ENSOMEG00000005677	larsb	99	89.596	ENSGACG00000020720	larsb	99	89.425	Gasterosteus_aculeatus
ENSOMEG00000005677	larsb	99	78.848	ENSGAGG00000002353	LARS	99	78.614	Gopherus_agassizii
ENSOMEG00000005677	larsb	100	77.703	ENSGGOG00000004103	LARS	100	77.703	Gorilla_gorilla
ENSOMEG00000005677	larsb	99	90.846	ENSHBUG00000003051	larsb	100	93.103	Haplochromis_burtoni
ENSOMEG00000005677	larsb	100	77.280	ENSHGLG00000006937	LARS	100	77.280	Heterocephalus_glaber_female
ENSOMEG00000005677	larsb	100	77.280	ENSHGLG00100002801	LARS	100	77.280	Heterocephalus_glaber_male
ENSOMEG00000005677	larsb	99	90.378	ENSHCOG00000003651	larsb	100	90.279	Hippocampus_comes
ENSOMEG00000005677	larsb	99	85.469	ENSIPUG00000010756	lars	100	85.579	Ictalurus_punctatus
ENSOMEG00000005677	larsb	100	77.956	ENSSTOG00000002356	LARS	100	77.956	Ictidomys_tridecemlineatus
ENSOMEG00000005677	larsb	100	76.689	ENSJJAG00000015265	Lars	100	76.689	Jaculus_jaculus
ENSOMEG00000005677	larsb	100	92.743	ENSKMAG00000009903	larsb	100	93.165	Kryptolebias_marmoratus
ENSOMEG00000005677	larsb	100	92.152	ENSLBEG00000025237	larsb	100	92.152	Labrus_bergylta
ENSOMEG00000005677	larsb	100	78.890	ENSLACG00000009321	LARS	100	79.394	Latimeria_chalumnae
ENSOMEG00000005677	larsb	99	82.990	ENSLOCG00000010442	larsb	99	82.487	Lepisosteus_oculatus
ENSOMEG00000005677	larsb	99	77.921	ENSLAFG00000000318	LARS	100	77.665	Loxodonta_africana
ENSOMEG00000005677	larsb	100	77.787	ENSMFAG00000038685	LARS	100	77.787	Macaca_fascicularis
ENSOMEG00000005677	larsb	100	77.787	ENSMMUG00000029787	LARS	100	77.787	Macaca_mulatta
ENSOMEG00000005677	larsb	99	76.248	ENSMNEG00000044014	LARS	99	75.888	Macaca_nemestrina
ENSOMEG00000005677	larsb	99	78.227	ENSMLEG00000037563	LARS	99	77.834	Mandrillus_leucophaeus
ENSOMEG00000005677	larsb	100	93.074	ENSMAMG00000021385	larsb	100	93.074	Mastacembelus_armatus
ENSOMEG00000005677	larsb	100	92.483	ENSMZEG00005002662	larsb	100	92.483	Maylandia_zebra
ENSOMEG00000005677	larsb	96	80.053	ENSMGAG00000009388	LARS	100	80.402	Meleagris_gallopavo
ENSOMEG00000005677	larsb	99	67.212	ENSMAUG00000003063	Lars	99	67.174	Mesocricetus_auratus
ENSOMEG00000005677	larsb	100	78.463	ENSMICG00000035589	-	100	78.463	Microcebus_murinus
ENSOMEG00000005677	larsb	100	65.034	ENSMICG00000035435	-	100	65.034	Microcebus_murinus
ENSOMEG00000005677	larsb	100	76.203	ENSMOCG00000002092	Lars	100	76.203	Microtus_ochrogaster
ENSOMEG00000005677	larsb	100	88.497	ENSMMOG00000013802	larsb	100	88.497	Mola_mola
ENSOMEG00000005677	larsb	99	72.938	ENSMODG00000010231	LARS	100	72.906	Monodelphis_domestica
ENSOMEG00000005677	larsb	99	89.571	ENSMALG00000018444	larsb	99	89.571	Monopterus_albus
ENSOMEG00000005677	larsb	100	76.456	MGP_CAROLIEiJ_G0022225	Lars	100	76.456	Mus_caroli
ENSOMEG00000005677	larsb	100	76.118	ENSMUSG00000024493	Lars	100	76.118	Mus_musculus
ENSOMEG00000005677	larsb	100	76.118	MGP_PahariEiJ_G0018958	Lars	100	76.118	Mus_pahari
ENSOMEG00000005677	larsb	100	76.456	MGP_SPRETEiJ_G0023135	Lars	100	76.456	Mus_spretus
ENSOMEG00000005677	larsb	100	78.378	ENSMPUG00000007844	LARS	100	78.378	Mustela_putorius_furo
ENSOMEG00000005677	larsb	99	77.730	ENSMLUG00000001125	LARS	100	77.599	Myotis_lucifugus
ENSOMEG00000005677	larsb	100	76.436	ENSNGAG00000011596	Lars	100	76.436	Nannospalax_galili
ENSOMEG00000005677	larsb	100	92.821	ENSNBRG00000005764	larsb	100	92.821	Neolamprologus_brichardi
ENSOMEG00000005677	larsb	99	77.797	ENSNLEG00000009816	LARS	99	77.411	Nomascus_leucogenys
ENSOMEG00000005677	larsb	53	81.081	ENSMEUG00000002332	-	59	74.216	Notamacropus_eugenii
ENSOMEG00000005677	larsb	79	82.258	ENSOPRG00000003076	LARS	83	82.258	Ochotona_princeps
ENSOMEG00000005677	larsb	99	75.645	ENSODEG00000004882	LARS	100	75.381	Octodon_degus
ENSOMEG00000005677	larsb	100	92.990	ENSONIG00000008493	larsb	100	92.990	Oreochromis_niloticus
ENSOMEG00000005677	larsb	100	75.630	ENSOANG00000005755	LARS	100	75.630	Ornithorhynchus_anatinus
ENSOMEG00000005677	larsb	100	78.209	ENSOCUG00000015684	LARS	100	78.209	Oryctolagus_cuniculus
ENSOMEG00000005677	larsb	100	97.382	ENSORLG00000001622	larsb	100	97.382	Oryzias_latipes
ENSOMEG00000005677	larsb	100	97.382	ENSORLG00020019950	larsb	100	97.382	Oryzias_latipes_hni
ENSOMEG00000005677	larsb	100	97.635	ENSORLG00015003895	larsb	100	97.635	Oryzias_latipes_hsok
ENSOMEG00000005677	larsb	96	76.460	ENSOGAG00000008750	LARS	100	76.261	Otolemur_garnettii
ENSOMEG00000005677	larsb	99	78.074	ENSOARG00000002454	-	100	77.853	Ovis_aries
ENSOMEG00000005677	larsb	100	77.787	ENSOARG00000015911	-	99	77.787	Ovis_aries
ENSOMEG00000005677	larsb	99	78.227	ENSPPAG00000027964	LARS	99	77.750	Pan_paniscus
ENSOMEG00000005677	larsb	100	78.463	ENSPPRG00000023492	LARS	100	78.463	Panthera_pardus
ENSOMEG00000005677	larsb	100	78.294	ENSPTIG00000013110	LARS	100	78.294	Panthera_tigris_altaica
ENSOMEG00000005677	larsb	100	77.618	ENSPTRG00000017372	LARS	100	77.618	Pan_troglodytes
ENSOMEG00000005677	larsb	100	77.618	ENSPANG00000002663	LARS	100	77.618	Papio_anubis
ENSOMEG00000005677	larsb	99	84.111	ENSPKIG00000006650	larsb	99	81.313	Paramormyrops_kingsleyae
ENSOMEG00000005677	larsb	99	79.278	ENSPSIG00000015641	LARS	100	79.121	Pelodiscus_sinensis
ENSOMEG00000005677	larsb	69	92.250	ENSPMGG00000019556	LARS	100	92.250	Periophthalmus_magnuspinnatus
ENSOMEG00000005677	larsb	100	72.658	ENSPEMG00000010933	Lars	100	72.658	Peromyscus_maniculatus_bairdii
ENSOMEG00000005677	larsb	51	60.331	ENSPMAG00000005301	larsb	99	60.331	Petromyzon_marinus
ENSOMEG00000005677	larsb	100	76.436	ENSPCIG00000030572	LARS	100	76.436	Phascolarctos_cinereus
ENSOMEG00000005677	larsb	100	93.243	ENSPFOG00000002361	larsb	100	93.243	Poecilia_formosa
ENSOMEG00000005677	larsb	100	93.159	ENSPLAG00000016550	larsb	100	93.159	Poecilia_latipinna
ENSOMEG00000005677	larsb	100	93.074	ENSPMEG00000018422	larsb	100	93.074	Poecilia_mexicana
ENSOMEG00000005677	larsb	100	92.399	ENSPREG00000005668	larsb	100	92.399	Poecilia_reticulata
ENSOMEG00000005677	larsb	99	76.375	ENSPPYG00000015908	LARS	97	76.058	Pongo_abelii
ENSOMEG00000005677	larsb	87	65.487	ENSPCAG00000005621	LARS	96	64.307	Procavia_capensis
ENSOMEG00000005677	larsb	100	77.196	ENSPCOG00000019325	LARS	100	77.196	Propithecus_coquereli
ENSOMEG00000005677	larsb	96	68.380	ENSPVAG00000011237	LARS	100	70.779	Pteropus_vampyrus
ENSOMEG00000005677	larsb	100	92.483	ENSPNYG00000015254	larsb	100	92.483	Pundamilia_nyererei
ENSOMEG00000005677	larsb	100	86.064	ENSPNAG00000027191	larsb	100	86.064	Pygocentrus_nattereri
ENSOMEG00000005677	larsb	100	76.203	ENSRNOG00000018304	Lars	100	76.203	Rattus_norvegicus
ENSOMEG00000005677	larsb	95	76.661	ENSRBIG00000043198	LARS	99	76.661	Rhinopithecus_bieti
ENSOMEG00000005677	larsb	91	45.652	YPL160W	CDC60	99	45.652	Saccharomyces_cerevisiae
ENSOMEG00000005677	larsb	99	75.818	ENSSBOG00000026661	LARS	100	78.417	Saimiri_boliviensis_boliviensis
ENSOMEG00000005677	larsb	100	77.975	ENSSHAG00000006084	LARS	100	77.975	Sarcophilus_harrisii
ENSOMEG00000005677	larsb	98	84.978	ENSSFOG00015018117	larsb	90	84.978	Scleropages_formosus
ENSOMEG00000005677	larsb	89	92.905	ENSSMAG00000004078	larsb	97	93.001	Scophthalmus_maximus
ENSOMEG00000005677	larsb	100	93.750	ENSSDUG00000021142	larsb	100	93.750	Seriola_dumerili
ENSOMEG00000005677	larsb	100	94.003	ENSSLDG00000007054	larsb	100	94.003	Seriola_lalandi_dorsalis
ENSOMEG00000005677	larsb	85	70.000	ENSSARG00000013481	LARS	85	68.889	Sorex_araneus
ENSOMEG00000005677	larsb	100	78.331	ENSSPUG00000013805	LARS	100	78.921	Sphenodon_punctatus
ENSOMEG00000005677	larsb	100	94.426	ENSSPAG00000012124	larsb	100	94.426	Stegastes_partitus
ENSOMEG00000005677	larsb	100	75.169	ENSSSCG00000014411	LARS	100	75.169	Sus_scrofa
ENSOMEG00000005677	larsb	99	79.106	ENSTGUG00000000092	-	100	78.080	Taeniopygia_guttata
ENSOMEG00000005677	larsb	100	89.274	ENSTRUG00000005358	larsb	100	89.274	Takifugu_rubripes
ENSOMEG00000005677	larsb	99	85.800	ENSTNIG00000018214	larsb	100	86.039	Tetraodon_nigroviridis
ENSOMEG00000005677	larsb	91	76.829	ENSTBEG00000003757	LARS	93	76.829	Tupaia_belangeri
ENSOMEG00000005677	larsb	96	75.736	ENSTTRG00000016712	LARS	96	75.548	Tursiops_truncatus
ENSOMEG00000005677	larsb	95	79.211	ENSUAMG00000019907	LARS	99	79.211	Ursus_americanus
ENSOMEG00000005677	larsb	100	78.294	ENSUMAG00000010585	LARS	100	78.294	Ursus_maritimus
ENSOMEG00000005677	larsb	92	78.020	ENSVPAG00000000557	LARS	92	78.020	Vicugna_pacos
ENSOMEG00000005677	larsb	100	78.632	ENSVVUG00000021124	LARS	100	78.632	Vulpes_vulpes
ENSOMEG00000005677	larsb	99	80.189	ENSXETG00000002320	lars	99	80.000	Xenopus_tropicalis
ENSOMEG00000005677	larsb	100	92.399	ENSXMAG00000001454	larsb	100	92.399	Xiphophorus_maculatus