EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000005682 (Gene tree)
Gene ID: 112137466
Gene Symbol: SRL (1 of many)
Alias: -
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 50660 bases
Position: chrNVQA01000036.1:14527392-14578051
Accession: 112137466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000024812	MMR_HSR1	PF01926.23	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000008718	SRL (1 of many)-201	3888	-	ENSOMEP00000024812	861 (aa)	XP_024115572	UPI000CF839D0

Gene Model

Click here to download ENSOMEG00000005682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000005682's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000005682	SRL	53	74.398	ENSOMEG00000010006	srl	97	74.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000005682	SRL	53	72.967	ENSG00000185739	SRL	99	73.576	Homo_sapiens
ENSOMEG00000005682	SRL	56	86.448	ENSAPOG00000012432	SRL	99	85.900	Acanthochromis_polyacanthus
ENSOMEG00000005682	SRL	53	74.398	ENSAPOG00000018093	srl	99	73.951	Acanthochromis_polyacanthus
ENSOMEG00000005682	SRL	53	72.767	ENSAMEG00000010862	SRL	50	72.867	Ailuropoda_melanoleuca
ENSOMEG00000005682	SRL	54	85.065	ENSACIG00000015419	SRL	100	85.065	Amphilophus_citrinellus
ENSOMEG00000005682	SRL	53	74.836	ENSACIG00000015799	srl	98	74.561	Amphilophus_citrinellus
ENSOMEG00000005682	SRL	52	74.382	ENSAOCG00000007574	srl	99	74.099	Amphiprion_ocellaris
ENSOMEG00000005682	SRL	54	87.689	ENSAOCG00000017049	SRL	98	86.609	Amphiprion_ocellaris
ENSOMEG00000005682	SRL	54	82.505	ENSAPEG00000006533	SRL	98	83.369	Amphiprion_percula
ENSOMEG00000005682	SRL	53	74.179	ENSAPEG00000006911	srl	94	73.904	Amphiprion_percula
ENSOMEG00000005682	SRL	53	74.179	ENSATEG00000024315	srl	94	73.904	Anabas_testudineus
ENSOMEG00000005682	SRL	54	88.745	ENSATEG00000009643	SRL	60	81.346	Anabas_testudineus
ENSOMEG00000005682	SRL	53	71.245	ENSACAG00000016380	SRL	84	71.002	Anolis_carolinensis
ENSOMEG00000005682	SRL	53	74.179	ENSACLG00000027685	srl	97	73.904	Astatotilapia_calliptera
ENSOMEG00000005682	SRL	99	68.455	ENSACLG00000024674	SRL	84	74.952	Astatotilapia_calliptera
ENSOMEG00000005682	SRL	50	83.120	ENSAMXG00000038693	SRL	100	76.484	Astyanax_mexicanus
ENSOMEG00000005682	SRL	53	74.561	ENSAMXG00000018789	srl	89	73.333	Astyanax_mexicanus
ENSOMEG00000005682	SRL	53	72.926	ENSBTAG00000001078	SRL	56	73.348	Bos_taurus
ENSOMEG00000005682	SRL	53	73.085	ENSCJAG00000019750	SRL	94	72.867	Callithrix_jacchus
ENSOMEG00000005682	SRL	53	72.767	ENSCAFG00000019233	SRL	83	72.867	Canis_familiaris
ENSOMEG00000005682	SRL	62	65.378	ENSCAFG00020025024	SRL	61	65.434	Canis_lupus_dingo
ENSOMEG00000005682	SRL	53	72.926	ENSCHIG00000017927	SRL	55	73.348	Capra_hircus
ENSOMEG00000005682	SRL	53	73.407	ENSTSYG00000007919	SRL	99	74.260	Carlito_syrichta
ENSOMEG00000005682	SRL	53	72.967	ENSCPOG00000012643	SRL	94	72.648	Cavia_porcellus
ENSOMEG00000005682	SRL	53	69.737	ENSCCAG00000032646	SRL	100	75.000	Cebus_capucinus
ENSOMEG00000005682	SRL	74	58.485	ENSCATG00000032227	-	94	72.648	Cercocebus_atys
ENSOMEG00000005682	SRL	53	73.085	ENSCLAG00000016242	SRL	94	73.085	Chinchilla_lanigera
ENSOMEG00000005682	SRL	72	60.254	ENSCSAG00000009635	-	55	62.912	Chlorocebus_sabaeus
ENSOMEG00000005682	SRL	53	75.561	ENSCPBG00000026371	SRL	94	70.513	Chrysemys_picta_bellii
ENSOMEG00000005682	SRL	53	72.967	ENSCANG00000035872	SRL	99	73.576	Colobus_angolensis_palliatus
ENSOMEG00000005682	SRL	64	64.029	ENSCGRG00001016630	Srl	94	73.085	Cricetulus_griseus_chok1gshd
ENSOMEG00000005682	SRL	64	64.029	ENSCGRG00000005458	Srl	94	73.085	Cricetulus_griseus_crigri
ENSOMEG00000005682	SRL	53	81.562	ENSCSEG00000011866	SRL	90	81.996	Cynoglossus_semilaevis
ENSOMEG00000005682	SRL	53	73.742	ENSCSEG00000016151	srl	95	73.465	Cynoglossus_semilaevis
ENSOMEG00000005682	SRL	53	74.725	ENSCVAG00000003513	srl	96	74.286	Cyprinodon_variegatus
ENSOMEG00000005682	SRL	53	75.274	ENSDARG00000104587	srl	94	74.781	Danio_rerio
ENSOMEG00000005682	SRL	53	72.210	ENSDNOG00000011643	SRL	62	64.935	Dasypus_novemcinctus
ENSOMEG00000005682	SRL	53	72.867	ENSDORG00000014807	Srl	94	72.867	Dipodomys_ordii
ENSOMEG00000005682	SRL	53	73.684	ENSEASG00005000942	SRL	60	66.604	Equus_asinus_asinus
ENSOMEG00000005682	SRL	53	73.465	ENSECAG00000024219	SRL	94	73.465	Equus_caballus
ENSOMEG00000005682	SRL	53	72.304	ENSELUG00000015616	srl	95	71.459	Esox_lucius
ENSOMEG00000005682	SRL	53	73.187	ENSFCAG00000022075	SRL	93	73.187	Felis_catus
ENSOMEG00000005682	SRL	53	73.043	ENSFALG00000004328	SRL	63	72.826	Ficedula_albicollis
ENSOMEG00000005682	SRL	53	73.407	ENSFDAG00000006199	SRL	94	73.085	Fukomys_damarensis
ENSOMEG00000005682	SRL	72	82.353	ENSFHEG00000011854	SRL	100	87.446	Fundulus_heteroclitus
ENSOMEG00000005682	SRL	54	73.662	ENSFHEG00000011239	srl	97	73.707	Fundulus_heteroclitus
ENSOMEG00000005682	SRL	53	72.805	ENSGMOG00000014954	srl	100	72.805	Gadus_morhua
ENSOMEG00000005682	SRL	53	72.391	ENSGALG00000038884	SRL	95	72.174	Gallus_gallus
ENSOMEG00000005682	SRL	65	89.195	ENSGAFG00000016984	SRL	99	86.768	Gambusia_affinis
ENSOMEG00000005682	SRL	53	74.781	ENSGAFG00000000010	srl	96	74.342	Gambusia_affinis
ENSOMEG00000005682	SRL	53	72.436	ENSGACG00000011332	srl	100	72.009	Gasterosteus_aculeatus
ENSOMEG00000005682	SRL	72	60.601	ENSGGOG00000011312	-	94	72.648	Gorilla_gorilla
ENSOMEG00000005682	SRL	68	87.131	ENSHBUG00000015710	SRL	60	86.071	Haplochromis_burtoni
ENSOMEG00000005682	SRL	53	74.179	ENSHBUG00000007581	srl	97	73.904	Haplochromis_burtoni
ENSOMEG00000005682	SRL	53	73.187	ENSHGLG00000015271	SRL	94	72.867	Heterocephalus_glaber_female
ENSOMEG00000005682	SRL	53	73.187	ENSHGLG00100019378	SRL	94	72.867	Heterocephalus_glaber_male
ENSOMEG00000005682	SRL	53	73.961	ENSHCOG00000008687	srl	98	73.684	Hippocampus_comes
ENSOMEG00000005682	SRL	99	57.576	ENSHCOG00000001012	SRL	58	76.243	Hippocampus_comes
ENSOMEG00000005682	SRL	53	73.970	ENSIPUG00000012513	srl	96	73.753	Ictalurus_punctatus
ENSOMEG00000005682	SRL	53	72.271	ENSIPUG00000011609	SRL	100	72.052	Ictalurus_punctatus
ENSOMEG00000005682	SRL	53	73.407	ENSSTOG00000021151	-	96	71.795	Ictidomys_tridecemlineatus
ENSOMEG00000005682	SRL	53	73.626	ENSJJAG00000016400	Srl	94	73.304	Jaculus_jaculus
ENSOMEG00000005682	SRL	53	73.789	ENSKMAG00000014115	srl	92	76.798	Kryptolebias_marmoratus
ENSOMEG00000005682	SRL	71	81.391	ENSKMAG00000019537	SRL	100	87.665	Kryptolebias_marmoratus
ENSOMEG00000005682	SRL	53	73.319	ENSLBEG00000026643	srl	95	73.043	Labrus_bergylta
ENSOMEG00000005682	SRL	54	86.147	ENSLBEG00000013811	SRL	97	85.281	Labrus_bergylta
ENSOMEG00000005682	SRL	53	71.648	ENSLACG00000002825	SRL	98	71.586	Latimeria_chalumnae
ENSOMEG00000005682	SRL	53	73.684	ENSLOCG00000002644	srl	94	73.465	Lepisosteus_oculatus
ENSOMEG00000005682	SRL	53	72.308	ENSLAFG00000006329	SRL	50	72.308	Loxodonta_africana
ENSOMEG00000005682	SRL	51	73.469	ENSMFAG00000037383	SRL	99	73.576	Macaca_fascicularis
ENSOMEG00000005682	SRL	53	72.549	ENSMNEG00000019236	-	94	72.648	Macaca_nemestrina
ENSOMEG00000005682	SRL	53	67.841	ENSMLEG00000032156	SRL	93	67.544	Mandrillus_leucophaeus
ENSOMEG00000005682	SRL	71	72.669	ENSMAMG00000013756	SRL	61	79.444	Mastacembelus_armatus
ENSOMEG00000005682	SRL	53	74.179	ENSMAMG00000023322	srl	94	73.904	Mastacembelus_armatus
ENSOMEG00000005682	SRL	99	62.025	ENSMZEG00005004010	SRL	60	85.863	Maylandia_zebra
ENSOMEG00000005682	SRL	53	74.179	ENSMZEG00005004548	srl	97	73.904	Maylandia_zebra
ENSOMEG00000005682	SRL	67	60.855	ENSMGAG00000009342	SRL	94	78.763	Meleagris_gallopavo
ENSOMEG00000005682	SRL	53	73.626	ENSMICG00000032307	SRL	93	73.626	Microcebus_murinus
ENSOMEG00000005682	SRL	53	72.967	ENSMOCG00000008208	Srl	94	72.648	Microtus_ochrogaster
ENSOMEG00000005682	SRL	53	83.830	ENSMMOG00000021572	SRL	99	82.979	Mola_mola
ENSOMEG00000005682	SRL	53	74.179	ENSMMOG00000013970	srl	99	73.742	Mola_mola
ENSOMEG00000005682	SRL	53	72.609	ENSMODG00000016380	-	60	64.545	Monodelphis_domestica
ENSOMEG00000005682	SRL	51	83.945	ENSMALG00000000670	SRL	98	84.491	Monopterus_albus
ENSOMEG00000005682	SRL	53	73.465	ENSMALG00000005039	srl	98	73.187	Monopterus_albus
ENSOMEG00000005682	SRL	53	73.407	MGP_CAROLIEiJ_G0020400	Srl	96	71.581	Mus_caroli
ENSOMEG00000005682	SRL	53	73.407	ENSMUSG00000022519	Srl	96	71.581	Mus_musculus
ENSOMEG00000005682	SRL	53	73.407	MGP_SPRETEiJ_G0021294	Srl	96	71.581	Mus_spretus
ENSOMEG00000005682	SRL	63	64.021	ENSMPUG00000015025	SRL	61	65.257	Mustela_putorius_furo
ENSOMEG00000005682	SRL	67	62.906	ENSMLUG00000030733	SRL	65	66.604	Myotis_lucifugus
ENSOMEG00000005682	SRL	53	73.523	ENSNGAG00000019741	Srl	94	73.523	Nannospalax_galili
ENSOMEG00000005682	SRL	53	74.179	ENSNBRG00000023775	srl	94	73.904	Neolamprologus_brichardi
ENSOMEG00000005682	SRL	100	59.909	ENSNBRG00000002422	SRL	82	79.732	Neolamprologus_brichardi
ENSOMEG00000005682	SRL	53	69.163	ENSNLEG00000029051	SRL	93	68.860	Nomascus_leucogenys
ENSOMEG00000005682	SRL	53	68.490	ENSOPRG00000000477	-	52	68.571	Ochotona_princeps
ENSOMEG00000005682	SRL	53	73.626	ENSODEG00000013256	SRL	94	73.304	Octodon_degus
ENSOMEG00000005682	SRL	53	73.961	ENSONIG00000005192	srl	94	73.684	Oreochromis_niloticus
ENSOMEG00000005682	SRL	53	72.210	ENSOCUG00000025140	SRL	52	68.902	Oryctolagus_cuniculus
ENSOMEG00000005682	SRL	92	81.454	ENSORLG00000015064	SRL	98	93.709	Oryzias_latipes
ENSOMEG00000005682	SRL	53	73.961	ENSORLG00000008291	srl	93	74.939	Oryzias_latipes
ENSOMEG00000005682	SRL	53	73.961	ENSORLG00020019784	srl	81	75.184	Oryzias_latipes_hni
ENSOMEG00000005682	SRL	54	93.926	ENSORLG00020018173	SRL	98	93.926	Oryzias_latipes_hni
ENSOMEG00000005682	SRL	53	73.961	ENSORLG00015009342	srl	93	72.532	Oryzias_latipes_hsok
ENSOMEG00000005682	SRL	54	93.709	ENSORLG00015019063	SRL	98	93.709	Oryzias_latipes_hsok
ENSOMEG00000005682	SRL	53	72.967	ENSOGAG00000029266	SRL	62	65.602	Otolemur_garnettii
ENSOMEG00000005682	SRL	53	72.926	ENSOARG00000003074	SRL	56	73.026	Ovis_aries
ENSOMEG00000005682	SRL	67	61.065	ENSPPAG00000024919	-	99	73.576	Pan_paniscus
ENSOMEG00000005682	SRL	53	73.187	ENSPPRG00000010274	SRL	99	74.032	Panthera_pardus
ENSOMEG00000005682	SRL	53	73.187	ENSPTIG00000015162	SRL	99	74.032	Panthera_tigris_altaica
ENSOMEG00000005682	SRL	67	61.065	ENSPTRG00000007712	SRL	99	73.576	Pan_troglodytes
ENSOMEG00000005682	SRL	53	72.549	ENSPANG00000013804	SRL	95	72.648	Papio_anubis
ENSOMEG00000005682	SRL	62	72.727	ENSPKIG00000024974	SRL	89	72.078	Paramormyrops_kingsleyae
ENSOMEG00000005682	SRL	53	75.488	ENSPKIG00000006405	srl	95	75.271	Paramormyrops_kingsleyae
ENSOMEG00000005682	SRL	72	59.746	ENSPSIG00000008586	SRL	50	72.368	Pelodiscus_sinensis
ENSOMEG00000005682	SRL	53	82.418	ENSPMGG00000023505	-	99	82.418	Periophthalmus_magnuspinnatus
ENSOMEG00000005682	SRL	53	74.066	ENSPMGG00000021081	srl	95	73.789	Periophthalmus_magnuspinnatus
ENSOMEG00000005682	SRL	53	72.867	ENSPEMG00000015842	Srl	94	72.867	Peromyscus_maniculatus_bairdii
ENSOMEG00000005682	SRL	50	64.480	ENSPMAG00000004786	srl	99	64.027	Petromyzon_marinus
ENSOMEG00000005682	SRL	53	72.727	ENSPCIG00000012128	SRL	98	72.826	Phascolarctos_cinereus
ENSOMEG00000005682	SRL	53	73.134	ENSPFOG00000011408	srl	94	72.708	Poecilia_formosa
ENSOMEG00000005682	SRL	81	75.973	ENSPLAG00000002932	SRL	99	85.683	Poecilia_latipinna
ENSOMEG00000005682	SRL	53	74.836	ENSPLAG00000008017	srl	96	74.561	Poecilia_latipinna
ENSOMEG00000005682	SRL	53	74.836	ENSPMEG00000006745	srl	96	74.561	Poecilia_mexicana
ENSOMEG00000005682	SRL	68	87.815	ENSPMEG00000005890	SRL	92	73.984	Poecilia_mexicana
ENSOMEG00000005682	SRL	67	90.239	ENSPREG00000000315	SRL	99	86.334	Poecilia_reticulata
ENSOMEG00000005682	SRL	53	74.617	ENSPREG00000007751	srl	98	74.342	Poecilia_reticulata
ENSOMEG00000005682	SRL	51	72.912	ENSPPYG00000007053	SRL	99	73.016	Pongo_abelii
ENSOMEG00000005682	SRL	53	72.368	ENSPCAG00000003378	-	50	72.467	Procavia_capensis
ENSOMEG00000005682	SRL	53	72.967	ENSPCOG00000023135	SRL	99	73.804	Propithecus_coquereli
ENSOMEG00000005682	SRL	63	64.416	ENSPVAG00000006586	SRL	63	65.428	Pteropus_vampyrus
ENSOMEG00000005682	SRL	53	74.179	ENSPNYG00000001200	srl	97	73.904	Pundamilia_nyererei
ENSOMEG00000005682	SRL	100	61.802	ENSPNYG00000003423	SRL	60	85.863	Pundamilia_nyererei
ENSOMEG00000005682	SRL	53	73.102	ENSPNAG00000023106	srl	96	72.318	Pygocentrus_nattereri
ENSOMEG00000005682	SRL	54	77.538	ENSPNAG00000007361	-	93	77.106	Pygocentrus_nattereri
ENSOMEG00000005682	SRL	64	63.509	ENSSBOG00000029273	SRL	94	72.867	Saimiri_boliviensis_boliviensis
ENSOMEG00000005682	SRL	53	72.826	ENSSHAG00000011715	-	50	72.826	Sarcophilus_harrisii
ENSOMEG00000005682	SRL	53	74.398	ENSSFOG00015009773	srl	96	73.753	Scleropages_formosus
ENSOMEG00000005682	SRL	53	72.210	ENSSFOG00015021327	SRL	50	71.490	Scleropages_formosus
ENSOMEG00000005682	SRL	53	74.617	ENSSMAG00000016274	srl	98	73.913	Scophthalmus_maximus
ENSOMEG00000005682	SRL	55	84.134	ENSSMAG00000002232	SRL	62	83.610	Scophthalmus_maximus
ENSOMEG00000005682	SRL	53	73.961	ENSSDUG00000010808	srl	98	73.684	Seriola_dumerili
ENSOMEG00000005682	SRL	53	83.974	ENSSDUG00000009161	SRL	99	83.974	Seriola_dumerili
ENSOMEG00000005682	SRL	53	73.961	ENSSLDG00000022024	srl	96	73.684	Seriola_lalandi_dorsalis
ENSOMEG00000005682	SRL	53	89.451	ENSSLDG00000014601	SRL	99	89.451	Seriola_lalandi_dorsalis
ENSOMEG00000005682	SRL	53	72.648	ENSSPUG00000016859	SRL	98	72.429	Sphenodon_punctatus
ENSOMEG00000005682	SRL	53	73.742	ENSSPAG00000019105	srl	94	73.626	Stegastes_partitus
ENSOMEG00000005682	SRL	53	85.466	ENSSPAG00000014254	SRL	99	85.466	Stegastes_partitus
ENSOMEG00000005682	SRL	53	72.807	ENSSSCG00000007949	SRL	99	73.465	Sus_scrofa
ENSOMEG00000005682	SRL	53	73.043	ENSTGUG00000003951	-	98	72.826	Taeniopygia_guttata
ENSOMEG00000005682	SRL	53	74.398	ENSTRUG00000006005	srl	94	74.123	Takifugu_rubripes
ENSOMEG00000005682	SRL	53	74.179	ENSTNIG00000009739	srl	94	73.904	Tetraodon_nigroviridis
ENSOMEG00000005682	SRL	53	73.187	ENSUAMG00000005701	SRL	63	66.603	Ursus_americanus
ENSOMEG00000005682	SRL	53	73.187	ENSUMAG00000002574	SRL	63	66.603	Ursus_maritimus
ENSOMEG00000005682	SRL	62	66.604	ENSVVUG00000016331	-	54	66.604	Vulpes_vulpes
ENSOMEG00000005682	SRL	53	73.144	ENSXETG00000017313	srl	98	73.026	Xenopus_tropicalis
ENSOMEG00000005682	SRL	53	86.768	ENSXCOG00000014584	SRL	99	86.551	Xiphophorus_couchianus
ENSOMEG00000005682	SRL	50	76.157	ENSXCOG00000010424	srl	96	76.102	Xiphophorus_couchianus
ENSOMEG00000005682	SRL	53	74.617	ENSXMAG00000004625	srl	92	73.176	Xiphophorus_maculatus
ENSOMEG00000005682	SRL	66	90.239	ENSXMAG00000027598	SRL	80	81.273	Xiphophorus_maculatus