EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000005809 (Gene tree)
Gene ID: 112155937
Gene Symbol: cth1
Alias: -
Full Name: mRNA decay activator protein ZFP36L2-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 2001 bases
Position: chrNVQA01000020.1:410553-412553
Accession: 112155937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000024923	zf-CCCH	PF00642.24	4.2e-25	1	4
ENSOMEP00000024923	zf-CCCH	PF00642.24	4.2e-25	2	4
ENSOMEP00000024923	zf-CCCH	PF00642.24	4.2e-25	3	4
ENSOMEP00000024923	zf-CCCH	PF00642.24	4.2e-25	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000008513	-	1935	-	ENSOMEP00000024923	337 (aa)	XP_024143765	UPI000CF80179

Gene Model

Click here to download ENSOMEG00000005809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000005809's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000005809	cth1	74	60.300	ENSAPOG00000012552	cth1	97	60.432	Acanthochromis_polyacanthus
ENSOMEG00000005809	cth1	77	58.974	ENSACIG00000016026	cth1	89	59.431	Amphilophus_citrinellus
ENSOMEG00000005809	cth1	85	60.323	ENSAOCG00000001644	cth1	100	57.372	Amphiprion_ocellaris
ENSOMEG00000005809	cth1	85	60.323	ENSAPEG00000008930	cth1	100	57.372	Amphiprion_percula
ENSOMEG00000005809	cth1	84	60.372	ENSATEG00000002281	cth1	97	58.514	Anabas_testudineus
ENSOMEG00000005809	cth1	71	60.246	ENSACLG00000015353	cth1	91	60.870	Astatotilapia_calliptera
ENSOMEG00000005809	cth1	81	52.104	ENSAMXG00000025717	cth1	98	52.104	Astyanax_mexicanus
ENSOMEG00000005809	cth1	85	58.696	ENSCSEG00000014617	cth1	100	58.075	Cynoglossus_semilaevis
ENSOMEG00000005809	cth1	85	56.291	ENSCVAG00000001680	cth1	66	54.754	Cyprinodon_variegatus
ENSOMEG00000005809	cth1	68	55.814	ENSDARG00000057328	cth1	91	55.822	Danio_rerio
ENSOMEG00000005809	cth1	77	52.492	ENSELUG00000012738	cth1	99	50.149	Esox_lucius
ENSOMEG00000005809	cth1	81	56.419	ENSFHEG00000022665	cth1	81	56.471	Fundulus_heteroclitus
ENSOMEG00000005809	cth1	81	60.490	ENSGMOG00000007360	cth1	82	59.363	Gadus_morhua
ENSOMEG00000005809	cth1	85	54.890	ENSGAFG00000019288	cth1	100	53.312	Gambusia_affinis
ENSOMEG00000005809	cth1	84	60.066	ENSGACG00000000802	cth1	99	58.940	Gasterosteus_aculeatus
ENSOMEG00000005809	cth1	79	61.905	ENSHBUG00000014400	cth1	91	61.338	Haplochromis_burtoni
ENSOMEG00000005809	cth1	78	52.453	ENSHCOG00000010276	cth1	88	50.943	Hippocampus_comes
ENSOMEG00000005809	cth1	82	54.221	ENSIPUG00000018040	cth1	96	52.273	Ictalurus_punctatus
ENSOMEG00000005809	cth1	85	58.416	ENSKMAG00000005944	cth1	100	57.096	Kryptolebias_marmoratus
ENSOMEG00000005809	cth1	85	59.688	ENSLBEG00000019253	cth1	100	58.805	Labrus_bergylta
ENSOMEG00000005809	cth1	62	53.684	ENSLOCG00000002047	cth1	90	51.579	Lepisosteus_oculatus
ENSOMEG00000005809	cth1	57	63.000	ENSMAMG00000001525	cth1	95	59.447	Mastacembelus_armatus
ENSOMEG00000005809	cth1	79	61.905	ENSMZEG00005022335	cth1	91	60.595	Maylandia_zebra
ENSOMEG00000005809	cth1	81	60.870	ENSMMOG00000020518	cth1	87	60.305	Mola_mola
ENSOMEG00000005809	cth1	76	54.030	ENSMALG00000020738	cth1	100	54.978	Monopterus_albus
ENSOMEG00000005809	cth1	77	62.452	ENSNBRG00000022789	cth1	88	62.452	Neolamprologus_brichardi
ENSOMEG00000005809	cth1	79	61.594	ENSONIG00000021318	cth1	91	60.584	Oreochromis_niloticus
ENSOMEG00000005809	cth1	85	70.957	ENSORLG00000022847	cth1	100	68.750	Oryzias_latipes
ENSOMEG00000005809	cth1	85	70.957	ENSORLG00020011979	cth1	100	68.421	Oryzias_latipes_hni
ENSOMEG00000005809	cth1	85	71.287	ENSORLG00015013084	cth1	100	69.408	Oryzias_latipes_hsok
ENSOMEG00000005809	cth1	75	52.098	ENSPKIG00000015883	cth1	86	51.049	Paramormyrops_kingsleyae
ENSOMEG00000005809	cth1	79	59.603	ENSPMGG00000004275	cth1	92	59.933	Periophthalmus_magnuspinnatus
ENSOMEG00000005809	cth1	85	57.235	ENSPFOG00000013583	cth1	94	55.627	Poecilia_formosa
ENSOMEG00000005809	cth1	85	57.556	ENSPLAG00000018158	cth1	94	55.627	Poecilia_latipinna
ENSOMEG00000005809	cth1	83	58.784	ENSPMEG00000005744	cth1	100	55.663	Poecilia_mexicana
ENSOMEG00000005809	cth1	81	59.247	ENSPREG00000004099	cth1	94	57.439	Poecilia_reticulata
ENSOMEG00000005809	cth1	77	59.615	ENSPNYG00000016705	cth1	90	59.615	Pundamilia_nyererei
ENSOMEG00000005809	cth1	85	50.606	ENSPNAG00000013147	cth1	83	53.160	Pygocentrus_nattereri
ENSOMEG00000005809	cth1	75	53.650	ENSSFOG00015017190	cth1	79	50.598	Scleropages_formosus
ENSOMEG00000005809	cth1	85	56.211	ENSSMAG00000007977	cth1	100	57.585	Scophthalmus_maximus
ENSOMEG00000005809	cth1	85	59.878	ENSSDUG00000004321	cth1	100	58.663	Seriola_dumerili
ENSOMEG00000005809	cth1	76	64.336	ENSSLDG00000010023	-	100	61.094	Seriola_lalandi_dorsalis
ENSOMEG00000005809	cth1	85	58.788	ENSSLDG00000012760	cth1	100	60.909	Seriola_lalandi_dorsalis
ENSOMEG00000005809	cth1	85	58.788	ENSSLDG00000004516	-	100	60.909	Seriola_lalandi_dorsalis
ENSOMEG00000005809	cth1	85	58.044	ENSSPAG00000018659	cth1	100	57.278	Stegastes_partitus
ENSOMEG00000005809	cth1	85	57.321	ENSTRUG00000012770	cth1	100	54.232	Takifugu_rubripes
ENSOMEG00000005809	cth1	85	56.563	ENSTNIG00000000740	cth1	100	54.717	Tetraodon_nigroviridis
ENSOMEG00000005809	cth1	72	57.613	ENSXCOG00000003710	cth1	81	55.652	Xiphophorus_couchianus
ENSOMEG00000005809	cth1	85	56.369	ENSXMAG00000023885	cth1	82	58.366	Xiphophorus_maculatus