EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000005889 (Gene tree)
Gene ID: -
Gene Symbol: pum2
Alias: -
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 16270 bases
Position: chrNVQA01000023.1:18366843-18383112
Accession: ZDB-GENE-081031-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000004891	PUF	PF00806.19	7e-71	1	7
ENSOMEP00000004891	PUF	PF00806.19	7e-71	2	7
ENSOMEP00000004891	PUF	PF00806.19	7e-71	3	7
ENSOMEP00000004891	PUF	PF00806.19	7e-71	4	7
ENSOMEP00000004891	PUF	PF00806.19	7e-71	5	7
ENSOMEP00000004891	PUF	PF00806.19	7e-71	6	7
ENSOMEP00000004891	PUF	PF00806.19	7e-71	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000008403	-	2787	-	ENSOMEP00000004891	928 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000005889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000005889's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000005889	pum2	100	82.143	ENSG00000055917	PUM2	100	83.403	Homo_sapiens
ENSOMEG00000005889	pum2	100	89.186	ENSAPOG00000015756	pum2	94	89.079	Acanthochromis_polyacanthus
ENSOMEG00000005889	pum2	99	81.799	ENSAMEG00000002823	PUM2	95	83.054	Ailuropoda_melanoleuca
ENSOMEG00000005889	pum2	100	82.135	ENSACIG00000010646	pum2	94	82.781	Amphilophus_citrinellus
ENSOMEG00000005889	pum2	100	92.398	ENSAPEG00000019924	pum2	94	92.612	Amphiprion_percula
ENSOMEG00000005889	pum2	100	82.143	ENSANAG00000021807	PUM2	96	83.054	Aotus_nancymaae
ENSOMEG00000005889	pum2	55	87.332	ENSACLG00000022532	pum2	94	68.861	Astatotilapia_calliptera
ENSOMEG00000005889	pum2	99	82.353	ENSBTAG00000011155	PUM2	100	83.613	Bos_taurus
ENSOMEG00000005889	pum2	100	82.143	ENSCJAG00000007450	PUM2	96	83.054	Callithrix_jacchus
ENSOMEG00000005889	pum2	99	82.143	ENSCAFG00000003839	PUM2	95	83.403	Canis_familiaris
ENSOMEG00000005889	pum2	99	82.143	ENSCAFG00020025689	PUM2	95	83.403	Canis_lupus_dingo
ENSOMEG00000005889	pum2	99	82.353	ENSCHIG00000022180	PUM2	95	83.613	Capra_hircus
ENSOMEG00000005889	pum2	100	82.737	ENSTSYG00000014463	PUM2	95	83.579	Carlito_syrichta
ENSOMEG00000005889	pum2	100	68.544	ENSCAPG00000016888	PUM2	98	67.014	Cavia_aperea
ENSOMEG00000005889	pum2	100	75.556	ENSCPOG00000031996	PUM2	95	83.403	Cavia_porcellus
ENSOMEG00000005889	pum2	100	82.143	ENSCCAG00000037035	PUM2	95	83.403	Cebus_capucinus
ENSOMEG00000005889	pum2	100	82.143	ENSCATG00000043826	PUM2	95	83.403	Cercocebus_atys
ENSOMEG00000005889	pum2	100	75.344	ENSCLAG00000006048	PUM2	95	83.403	Chinchilla_lanigera
ENSOMEG00000005889	pum2	100	82.143	ENSCSAG00000008087	PUM2	95	83.403	Chlorocebus_sabaeus
ENSOMEG00000005889	pum2	61	79.268	ENSCHOG00000004575	PUM2	74	78.333	Choloepus_hoffmanni
ENSOMEG00000005889	pum2	100	73.913	ENSCPBG00000019966	PUM2	94	73.941	Chrysemys_picta_bellii
ENSOMEG00000005889	pum2	100	82.143	ENSCANG00000032797	PUM2	95	83.403	Colobus_angolensis_palliatus
ENSOMEG00000005889	pum2	100	75.238	ENSCGRG00001025023	Pum2	95	83.403	Cricetulus_griseus_chok1gshd
ENSOMEG00000005889	pum2	100	75.238	ENSCGRG00000001580	Pum2	95	83.403	Cricetulus_griseus_crigri
ENSOMEG00000005889	pum2	100	86.458	ENSCSEG00000020899	pum2	84	86.562	Cynoglossus_semilaevis
ENSOMEG00000005889	pum2	100	76.139	ENSDARG00000061040	pum2	85	91.537	Danio_rerio
ENSOMEG00000005889	pum2	96	76.310	ENSDNOG00000006733	PUM2	94	77.568	Dasypus_novemcinctus
ENSOMEG00000005889	pum2	85	90.036	ENSETEG00000017683	PUM2	77	90.036	Echinops_telfairi
ENSOMEG00000005889	pum2	71	68.615	ENSEBUG00000014828	pum2	75	72.082	Eptatretus_burgeri
ENSOMEG00000005889	pum2	100	53.438	ENSEBUG00000004435	pum2	96	53.143	Eptatretus_burgeri
ENSOMEG00000005889	pum2	99	82.143	ENSEASG00005009429	PUM2	95	83.403	Equus_asinus_asinus
ENSOMEG00000005889	pum2	99	82.143	ENSECAG00000021930	PUM2	100	83.403	Equus_caballus
ENSOMEG00000005889	pum2	73	61.268	ENSEEUG00000003224	-	66	60.185	Erinaceus_europaeus
ENSOMEG00000005889	pum2	99	97.094	ENSELUG00000014997	pum2	85	91.982	Esox_lucius
ENSOMEG00000005889	pum2	99	81.933	ENSFCAG00000027520	PUM2	95	83.193	Felis_catus
ENSOMEG00000005889	pum2	100	82.143	ENSFALG00000001759	PUM2	95	83.403	Ficedula_albicollis
ENSOMEG00000005889	pum2	100	74.313	ENSFDAG00000019685	PUM2	95	82.983	Fukomys_damarensis
ENSOMEG00000005889	pum2	100	90.150	ENSFHEG00000021596	pum2	94	89.186	Fundulus_heteroclitus
ENSOMEG00000005889	pum2	100	73.729	ENSGALG00000016481	PUM2	88	73.439	Gallus_gallus
ENSOMEG00000005889	pum2	100	90.899	ENSGAFG00000013691	pum2	94	90.792	Gambusia_affinis
ENSOMEG00000005889	pum2	99	82.143	ENSGAGG00000020698	PUM2	95	83.403	Gopherus_agassizii
ENSOMEG00000005889	pum2	100	82.143	ENSGGOG00000011374	PUM2	95	83.403	Gorilla_gorilla
ENSOMEG00000005889	pum2	100	73.862	ENSHGLG00000007892	PUM2	95	82.563	Heterocephalus_glaber_female
ENSOMEG00000005889	pum2	100	66.927	ENSHGLG00100015510	PUM2	95	82.218	Heterocephalus_glaber_male
ENSOMEG00000005889	pum2	100	74.973	ENSSTOG00000006262	PUM2	94	73.913	Ictidomys_tridecemlineatus
ENSOMEG00000005889	pum2	100	81.799	ENSJJAG00000020969	Pum2	95	83.054	Jaculus_jaculus
ENSOMEG00000005889	pum2	100	84.402	ENSKMAG00000017216	pum2	94	84.722	Kryptolebias_marmoratus
ENSOMEG00000005889	pum2	99	97.805	ENSLBEG00000020488	pum2	85	92.428	Labrus_bergylta
ENSOMEG00000005889	pum2	100	83.582	ENSLACG00000008723	PUM2	84	84.435	Latimeria_chalumnae
ENSOMEG00000005889	pum2	99	93.873	ENSLOCG00000017196	pum2	84	85.924	Lepisosteus_oculatus
ENSOMEG00000005889	pum2	100	81.381	ENSLAFG00000009278	PUM2	95	82.636	Loxodonta_africana
ENSOMEG00000005889	pum2	100	82.143	ENSMFAG00000000492	PUM2	95	83.403	Macaca_fascicularis
ENSOMEG00000005889	pum2	100	82.143	ENSMMUG00000023181	PUM2	95	83.403	Macaca_mulatta
ENSOMEG00000005889	pum2	100	82.143	ENSMNEG00000039659	PUM2	95	83.403	Macaca_nemestrina
ENSOMEG00000005889	pum2	100	82.143	ENSMLEG00000039243	PUM2	95	83.403	Mandrillus_leucophaeus
ENSOMEG00000005889	pum2	55	87.332	ENSMZEG00005000791	pum2	94	68.861	Maylandia_zebra
ENSOMEG00000005889	pum2	100	68.359	ENSMAUG00000000311	Pum2	95	83.054	Mesocricetus_auratus
ENSOMEG00000005889	pum2	100	75.370	ENSMICG00000011647	PUM2	96	83.054	Microcebus_murinus
ENSOMEG00000005889	pum2	100	68.164	ENSMOCG00000013663	Pum2	95	83.054	Microtus_ochrogaster
ENSOMEG00000005889	pum2	100	79.541	ENSMODG00000009811	PUM2	95	80.376	Monodelphis_domestica
ENSOMEG00000005889	pum2	100	87.834	ENSMALG00000022313	pum2	95	86.766	Monopterus_albus
ENSOMEG00000005889	pum2	100	82.143	MGP_CAROLIEiJ_G0017603	Pum2	100	83.403	Mus_caroli
ENSOMEG00000005889	pum2	100	81.933	ENSMUSG00000020594	Pum2	95	83.193	Mus_musculus
ENSOMEG00000005889	pum2	100	75.877	MGP_PahariEiJ_G0029361	Pum2	95	83.403	Mus_pahari
ENSOMEG00000005889	pum2	100	81.933	MGP_SPRETEiJ_G0018447	Pum2	100	83.193	Mus_spretus
ENSOMEG00000005889	pum2	99	82.143	ENSMPUG00000013734	PUM2	95	83.403	Mustela_putorius_furo
ENSOMEG00000005889	pum2	99	81.933	ENSMLUG00000007362	PUM2	95	83.193	Myotis_lucifugus
ENSOMEG00000005889	pum2	100	81.590	ENSNGAG00000016665	-	95	82.845	Nannospalax_galili
ENSOMEG00000005889	pum2	99	46.411	ENSNGAG00000016239	-	70	60.211	Nannospalax_galili
ENSOMEG00000005889	pum2	100	81.070	ENSNBRG00000020737	pum2	94	79.937	Neolamprologus_brichardi
ENSOMEG00000005889	pum2	100	82.143	ENSNLEG00000002509	PUM2	95	83.403	Nomascus_leucogenys
ENSOMEG00000005889	pum2	92	70.772	ENSMEUG00000016567	PUM2	95	71.608	Notamacropus_eugenii
ENSOMEG00000005889	pum2	66	95.238	ENSOPRG00000001963	PUM2	87	63.194	Ochotona_princeps
ENSOMEG00000005889	pum2	100	74.657	ENSODEG00000007823	PUM2	95	83.264	Octodon_degus
ENSOMEG00000005889	pum2	99	82.143	ENSOCUG00000017908	PUM2	95	83.403	Oryctolagus_cuniculus
ENSOMEG00000005889	pum2	100	95.177	ENSORLG00000012611	pum2	94	95.177	Oryzias_latipes
ENSOMEG00000005889	pum2	100	95.284	ENSORLG00020014452	pum2	94	95.284	Oryzias_latipes_hni
ENSOMEG00000005889	pum2	100	80.910	ENSORLG00015009427	pum2	75	75.676	Oryzias_latipes_hsok
ENSOMEG00000005889	pum2	98	75.415	ENSOGAG00000002187	PUM2	94	73.533	Otolemur_garnettii
ENSOMEG00000005889	pum2	99	82.353	ENSOARG00000017236	PUM2	95	83.613	Ovis_aries
ENSOMEG00000005889	pum2	100	82.143	ENSPPAG00000023095	PUM2	95	83.403	Pan_paniscus
ENSOMEG00000005889	pum2	99	81.933	ENSPPRG00000021443	PUM2	100	83.193	Panthera_pardus
ENSOMEG00000005889	pum2	99	81.933	ENSPTIG00000018982	PUM2	95	83.193	Panthera_tigris_altaica
ENSOMEG00000005889	pum2	100	82.143	ENSPTRG00000011692	PUM2	95	83.403	Pan_troglodytes
ENSOMEG00000005889	pum2	100	64.713	ENSPANG00000009393	PUM2	100	85.915	Papio_anubis
ENSOMEG00000005889	pum2	100	67.334	ENSPKIG00000023195	pum2	94	72.872	Paramormyrops_kingsleyae
ENSOMEG00000005889	pum2	100	82.563	ENSPSIG00000011626	PUM2	84	83.403	Pelodiscus_sinensis
ENSOMEG00000005889	pum2	100	88.532	ENSPMGG00000016123	pum2	94	88.532	Periophthalmus_magnuspinnatus
ENSOMEG00000005889	pum2	100	68.035	ENSPEMG00000008357	Pum2	95	83.054	Peromyscus_maniculatus_bairdii
ENSOMEG00000005889	pum2	100	57.655	ENSPMAG00000007038	pum2	90	78.462	Petromyzon_marinus
ENSOMEG00000005889	pum2	100	71.609	ENSPCIG00000022139	PUM2	94	71.188	Phascolarctos_cinereus
ENSOMEG00000005889	pum2	100	91.328	ENSPLAG00000001826	pum2	94	91.221	Poecilia_latipinna
ENSOMEG00000005889	pum2	100	91.016	ENSPREG00000006905	pum2	94	90.909	Poecilia_reticulata
ENSOMEG00000005889	pum2	100	82.143	ENSPPYG00000012617	PUM2	95	83.403	Pongo_abelii
ENSOMEG00000005889	pum2	75	86.957	ENSPCAG00000008001	PUM2	65	86.957	Procavia_capensis
ENSOMEG00000005889	pum2	100	75.556	ENSPCOG00000019636	PUM2	96	83.054	Propithecus_coquereli
ENSOMEG00000005889	pum2	99	71.130	ENSPVAG00000002920	PUM2	96	72.385	Pteropus_vampyrus
ENSOMEG00000005889	pum2	100	85.027	ENSPNAG00000008025	pum2	98	84.475	Pygocentrus_nattereri
ENSOMEG00000005889	pum2	100	75.159	ENSRNOG00000006180	Pum2	95	83.686	Rattus_norvegicus
ENSOMEG00000005889	pum2	100	82.143	ENSRBIG00000044880	PUM2	100	83.403	Rhinopithecus_bieti
ENSOMEG00000005889	pum2	100	82.143	ENSSBOG00000022007	PUM2	96	83.054	Saimiri_boliviensis_boliviensis
ENSOMEG00000005889	pum2	96	78.826	ENSSHAG00000002778	PUM2	95	79.665	Sarcophilus_harrisii
ENSOMEG00000005889	pum2	96	69.444	ENSSARG00000010992	PUM2	80	70.833	Sorex_araneus
ENSOMEG00000005889	pum2	100	92.505	ENSSPAG00000022948	pum2	94	92.719	Stegastes_partitus
ENSOMEG00000005889	pum2	99	82.143	ENSSSCG00000008600	PUM2	100	83.403	Sus_scrofa
ENSOMEG00000005889	pum2	81	81.381	ENSTBEG00000008729	PUM2	74	82.636	Tupaia_belangeri
ENSOMEG00000005889	pum2	99	81.381	ENSTTRG00000004887	PUM2	95	82.636	Tursiops_truncatus
ENSOMEG00000005889	pum2	73	81.799	ENSUAMG00000008120	PUM2	97	83.054	Ursus_americanus
ENSOMEG00000005889	pum2	99	82.143	ENSUMAG00000023198	PUM2	95	83.403	Ursus_maritimus
ENSOMEG00000005889	pum2	99	81.799	ENSVPAG00000005056	PUM2	95	83.054	Vicugna_pacos
ENSOMEG00000005889	pum2	99	82.143	ENSVVUG00000014829	PUM2	96	83.403	Vulpes_vulpes
ENSOMEG00000005889	pum2	100	63.734	ENSXETG00000008903	pum2	85	81.092	Xenopus_tropicalis
ENSOMEG00000005889	pum2	100	91.328	ENSXMAG00000017682	pum2	94	91.221	Xiphophorus_maculatus