EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000005918 (Gene tree)
Gene ID: 112155995
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 18156 bases
Position: chrNVQA01000020.1:318124-336279
Accession: 112155995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000004914	RRM_5	PF13893.6	9.4e-10	1	2
ENSOMEP00000004914	RRM_5	PF13893.6	9.4e-10	2	2
ENSOMEP00000024968	RRM_5	PF13893.6	9.4e-10	1	2
ENSOMEP00000024968	RRM_5	PF13893.6	9.4e-10	2	2
ENSOMEP00000004914	RRM_1	PF00076.22	7.3e-29	1	2
ENSOMEP00000004914	RRM_1	PF00076.22	7.3e-29	2	2
ENSOMEP00000024968	RRM_1	PF00076.22	7.3e-29	1	2
ENSOMEP00000024968	RRM_1	PF00076.22	7.3e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000008346	-	3766	-	ENSOMEP00000004914	349 (aa)	XP_024143869	UPI000CF80E38
ENSOMET00000008338	-	3876	-	ENSOMEP00000024968	349 (aa)	XP_024143869	UPI000CF80E38

Gene Model

Click here to download ENSOMEG00000005918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000005918's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000005918	rbm4.3	92	96.875	ENSOMEG00000005929	rbm4.3	100	91.501
ENSOMEG00000005918	rbm4.3	81	53.378	ENSOMEG00000001001	rbm4.1	59	53.378

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000005918	rbm4.3	97	60.174	ENSAPOG00000002991	rbm4.3	99	60.282	Acanthochromis_polyacanthus
ENSOMEG00000005918	rbm4.3	100	75.140	ENSAPOG00000002953	rbm4.3	100	74.302	Acanthochromis_polyacanthus
ENSOMEG00000005918	rbm4.3	100	71.549	ENSACIG00000021311	-	100	71.549	Amphilophus_citrinellus
ENSOMEG00000005918	rbm4.3	97	61.095	ENSACIG00000021295	rbm4.3	99	61.453	Amphilophus_citrinellus
ENSOMEG00000005918	rbm4.3	97	59.130	ENSAOCG00000007992	rbm4.3	99	59.437	Amphiprion_ocellaris
ENSOMEG00000005918	rbm4.3	100	74.022	ENSAOCG00000008015	rbm4.3	100	73.743	Amphiprion_ocellaris
ENSOMEG00000005918	rbm4.3	100	75.140	ENSAPEG00000017324	rbm4.3	100	73.464	Amphiprion_percula
ENSOMEG00000005918	rbm4.3	97	59.130	ENSAPEG00000017288	rbm4.3	99	59.437	Amphiprion_percula
ENSOMEG00000005918	rbm4.3	100	71.508	ENSATEG00000019375	rbm4.3	100	72.346	Anabas_testudineus
ENSOMEG00000005918	rbm4.3	97	60.933	ENSATEG00000019395	rbm4.3	97	60.465	Anabas_testudineus
ENSOMEG00000005918	rbm4.3	100	72.394	ENSACLG00000010620	-	100	72.394	Astatotilapia_calliptera
ENSOMEG00000005918	rbm4.3	97	59.942	ENSACLG00000010642	rbm4.3	97	57.955	Astatotilapia_calliptera
ENSOMEG00000005918	rbm4.3	62	69.444	ENSAMXG00000040224	rbm4.3	82	67.788	Astyanax_mexicanus
ENSOMEG00000005918	rbm4.3	100	68.715	ENSCSEG00000013659	rbm4.3	100	68.436	Cynoglossus_semilaevis
ENSOMEG00000005918	rbm4.3	100	72.599	ENSCVAG00000008508	rbm4.3	100	72.881	Cyprinodon_variegatus
ENSOMEG00000005918	rbm4.3	99	60.335	ENSCVAG00000008502	rbm4.3	99	57.778	Cyprinodon_variegatus
ENSOMEG00000005918	rbm4.3	95	64.157	ENSDARG00000022129	rbm4.3	99	64.986	Danio_rerio
ENSOMEG00000005918	rbm4.3	99	67.500	ENSELUG00000022150	rbm4.3	99	64.266	Esox_lucius
ENSOMEG00000005918	rbm4.3	99	66.017	ENSELUG00000022155	rbm4.3	99	66.111	Esox_lucius
ENSOMEG00000005918	rbm4.3	100	56.831	ENSELUG00000022168	rbm4.3	100	59.504	Esox_lucius
ENSOMEG00000005918	rbm4.3	81	75.175	ENSFHEG00000023137	rbm4.3	86	74.468	Fundulus_heteroclitus
ENSOMEG00000005918	rbm4.3	100	57.542	ENSGAFG00000001935	rbm4.3	100	57.222	Gambusia_affinis
ENSOMEG00000005918	rbm4.3	94	62.727	ENSGACG00000019980	rbm4.3	99	59.669	Gasterosteus_aculeatus
ENSOMEG00000005918	rbm4.3	100	72.394	ENSHBUG00000009020	-	100	72.394	Haplochromis_burtoni
ENSOMEG00000005918	rbm4.3	94	61.747	ENSHBUG00000009051	rbm4.3	97	57.955	Haplochromis_burtoni
ENSOMEG00000005918	rbm4.3	94	69.184	ENSHCOG00000010349	rbm4.3	100	69.081	Hippocampus_comes
ENSOMEG00000005918	rbm4.3	93	63.526	ENSIPUG00000022943	RBM4B	100	58.266	Ictalurus_punctatus
ENSOMEG00000005918	rbm4.3	100	71.023	ENSKMAG00000017468	rbm4.3	100	70.739	Kryptolebias_marmoratus
ENSOMEG00000005918	rbm4.3	100	69.359	ENSLBEG00000001071	-	100	71.309	Labrus_bergylta
ENSOMEG00000005918	rbm4.3	53	67.021	ENSLBEG00000001025	rbm4.3	81	63.736	Labrus_bergylta
ENSOMEG00000005918	rbm4.3	93	56.857	ENSLOCG00000002755	rbm4.3	100	54.712	Lepisosteus_oculatus
ENSOMEG00000005918	rbm4.3	100	72.067	ENSMAMG00000004715	-	84	72.905	Mastacembelus_armatus
ENSOMEG00000005918	rbm4.3	97	61.337	ENSMAMG00000004701	rbm4.3	97	61.429	Mastacembelus_armatus
ENSOMEG00000005918	rbm4.3	87	70.261	ENSMZEG00005028537	-	85	69.968	Maylandia_zebra
ENSOMEG00000005918	rbm4.3	100	69.014	ENSMZEG00005007417	-	100	69.014	Maylandia_zebra
ENSOMEG00000005918	rbm4.3	97	59.942	ENSMZEG00005028540	rbm4.3	97	57.955	Maylandia_zebra
ENSOMEG00000005918	rbm4.3	87	62.215	ENSMZEG00005007441	rbm4.3	79	58.497	Maylandia_zebra
ENSOMEG00000005918	rbm4.3	94	63.855	ENSMMOG00000012191	rbm4.3	99	60.335	Mola_mola
ENSOMEG00000005918	rbm4.3	97	60.882	ENSMALG00000015014	-	99	59.167	Monopterus_albus
ENSOMEG00000005918	rbm4.3	95	59.337	ENSMALG00000003032	rbm4.3	95	59.752	Monopterus_albus
ENSOMEG00000005918	rbm4.3	93	69.277	ENSMALG00000003001	rbm4.3	87	73.616	Monopterus_albus
ENSOMEG00000005918	rbm4.3	99	59.331	ENSNBRG00000012372	rbm4.3	99	57.542	Neolamprologus_brichardi
ENSOMEG00000005918	rbm4.3	100	72.394	ENSONIG00000018380	-	100	72.394	Oreochromis_niloticus
ENSOMEG00000005918	rbm4.3	99	58.953	ENSONIG00000018378	rbm4.3	99	58.082	Oreochromis_niloticus
ENSOMEG00000005918	rbm4.3	100	85.836	ENSORLG00000011589	rbm4.3	100	84.703	Oryzias_latipes
ENSOMEG00000005918	rbm4.3	94	55.422	ENSORLG00000024749	rbm4.3	99	50.689	Oryzias_latipes
ENSOMEG00000005918	rbm4.3	100	85.836	ENSORLG00000012473	rbm4.3	100	84.136	Oryzias_latipes
ENSOMEG00000005918	rbm4.3	100	85.836	ENSORLG00020012464	rbm4.3	100	84.136	Oryzias_latipes_hni
ENSOMEG00000005918	rbm4.3	100	86.402	ENSORLG00020012474	rbm4.3	100	85.836	Oryzias_latipes_hni
ENSOMEG00000005918	rbm4.3	99	54.648	ENSORLG00020012482	rbm4.3	99	51.389	Oryzias_latipes_hni
ENSOMEG00000005918	rbm4.3	100	85.836	ENSORLG00015013686	rbm4.3	100	84.136	Oryzias_latipes_hsok
ENSOMEG00000005918	rbm4.3	100	87.252	ENSORLG00015013698	rbm4.3	100	86.686	Oryzias_latipes_hsok
ENSOMEG00000005918	rbm4.3	94	55.422	ENSORLG00015013721	rbm4.3	99	50.970	Oryzias_latipes_hsok
ENSOMEG00000005918	rbm4.3	93	65.653	ENSPKIG00000007001	rbm4.3	100	60.000	Paramormyrops_kingsleyae
ENSOMEG00000005918	rbm4.3	97	60.795	ENSPLAG00000006077	rbm4.3	99	59.664	Poecilia_latipinna
ENSOMEG00000005918	rbm4.3	100	72.829	ENSPLAG00000006131	rbm4.3	100	72.549	Poecilia_latipinna
ENSOMEG00000005918	rbm4.3	100	73.729	ENSPMEG00000024263	rbm4.3	100	72.394	Poecilia_mexicana
ENSOMEG00000005918	rbm4.3	97	60.684	ENSPMEG00000024260	rbm4.3	99	59.104	Poecilia_mexicana
ENSOMEG00000005918	rbm4.3	100	72.829	ENSPMEG00000024271	rbm4.3	100	72.549	Poecilia_mexicana
ENSOMEG00000005918	rbm4.3	99	60.882	ENSPREG00000002093	-	99	59.944	Poecilia_reticulata
ENSOMEG00000005918	rbm4.3	100	68.820	ENSPREG00000002156	rbm4.3	100	67.978	Poecilia_reticulata
ENSOMEG00000005918	rbm4.3	94	60.961	ENSPNYG00000018564	rbm4.3	97	59.091	Pundamilia_nyererei
ENSOMEG00000005918	rbm4.3	100	72.394	ENSPNYG00000018541	rbm4.3	100	72.394	Pundamilia_nyererei
ENSOMEG00000005918	rbm4.3	100	60.598	ENSPNAG00000013053	rbm4.3	100	60.870	Pygocentrus_nattereri
ENSOMEG00000005918	rbm4.3	100	60.541	ENSSFOG00015015563	rbm4.3	100	59.189	Scleropages_formosus
ENSOMEG00000005918	rbm4.3	94	60.182	ENSSMAG00000013653	rbm4.3	97	58.453	Scophthalmus_maximus
ENSOMEG00000005918	rbm4.3	100	73.184	ENSSMAG00000013644	rbm4.3	100	71.508	Scophthalmus_maximus
ENSOMEG00000005918	rbm4.3	100	70.670	ENSSDUG00000018435	rbm4.3	100	72.067	Seriola_dumerili
ENSOMEG00000005918	rbm4.3	94	62.538	ENSSDUG00000018422	rbm4.3	99	58.427	Seriola_dumerili
ENSOMEG00000005918	rbm4.3	100	70.670	ENSSLDG00000017204	rbm4.3	100	72.067	Seriola_lalandi_dorsalis
ENSOMEG00000005918	rbm4.3	94	62.538	ENSSLDG00000017182	rbm4.3	99	58.146	Seriola_lalandi_dorsalis
ENSOMEG00000005918	rbm4.3	100	74.581	ENSSPAG00000008062	rbm4.3	100	74.022	Stegastes_partitus
ENSOMEG00000005918	rbm4.3	94	60.182	ENSSPAG00000008041	rbm4.3	83	57.835	Stegastes_partitus
ENSOMEG00000005918	rbm4.3	94	61.515	ENSTRUG00000023874	rbm4.3	99	58.708	Takifugu_rubripes
ENSOMEG00000005918	rbm4.3	100	73.464	ENSTRUG00000020901	rbm4.3	100	74.581	Takifugu_rubripes
ENSOMEG00000005918	rbm4.3	100	70.391	ENSTNIG00000005668	rbm4.3	100	71.229	Tetraodon_nigroviridis
ENSOMEG00000005918	rbm4.3	100	74.294	ENSXCOG00000006001	rbm4.3	100	73.729	Xiphophorus_couchianus
ENSOMEG00000005918	rbm4.3	97	59.714	ENSXCOG00000005996	rbm4.3	100	59.945	Xiphophorus_couchianus
ENSOMEG00000005918	rbm4.3	97	60.632	ENSXMAG00000025173	rbm4.3	99	60.393	Xiphophorus_maculatus
ENSOMEG00000005918	rbm4.3	100	73.669	ENSXMAG00000011698	rbm4.3	100	73.389	Xiphophorus_maculatus
ENSOMEG00000005918	rbm4.3	100	74.294	ENSXMAG00000021997	rbm4.3	100	73.729	Xiphophorus_maculatus